| Literature DB >> 32143662 |
Feimeng An1,2, Litian Zhang1,2, Hongyan Gao1,2, Jiaqi Wang1,2, Chang Liu1,2, Ye Tian1,2, Chao Ma1,2, Jian Zhao1,2, Kunzheng Wang3, Jianzhong Wang4.
Abstract
BACKGROUND: Gene polymorphism has an important influence on RETN gene expression level, and the increased level of resistin encoded in RETN will lead to metabolic disorder, especially lipid metabolism. Moreover, steroid-induced osteonecrosis of the femoral head (steroid-induced ONFH) is closely related to lipid metabolism level, so this study is intended to explore the relationship of RETN polymorphisms with susceptibility to steroid-induced ONFH in the Chinese Han population.Entities:
Keywords: Case-control study; Genetic polymorphisms; Resistin (RETN); Steroid-induced osteonecrosis of the femoral head (steroid-induced ONFH)
Mesh:
Substances:
Year: 2020 PMID: 32143662 PMCID: PMC7060642 DOI: 10.1186/s13018-020-1557-3
Source DB: PubMed Journal: J Orthop Surg Res ISSN: 1749-799X Impact factor: 2.359
Characteristics of the participants
| Variables | Cases ( | Controls ( | |
|---|---|---|---|
| Sex N | 0.966b | ||
| Male | 115 | 116 | |
| Female | 84 | 84 | |
| Age, years (mean ± SD) | 41.15 ± 12.934 | 41.20 ± 8.662 | 0.961a |
| Clinical stages | |||
| Stage II | 47 | ||
| Stage III | 94 | ||
| Stage IV | 58 | ||
| Hip lesions | |||
| unilateral | 59 | ||
| bilateral | 140 | ||
| TC (mmol/L) | 4.50 ± 0.923 | 4.54 ± 0.814 | 0.703 |
| TG (mmol/L) | 1.84 ± 1.455 | 1.76 ± 1.076 | 0.569 |
| HDL-C (mmol/L) | 1.07 ± 0.269 | 1.15 ± 0.214 | 0.000a |
| LDL-C (mmol/L) | 2.64 ± 0.765 | 2.56 ± 0.728 | 0.285 |
| TC/HDL-C | 4.41 ± 1.178 | 4.04 ± 0.856 | 0.000a |
| TG/HDL-C | 1.94 ± 1.930 | 1.64 ± 1.149 | 0.059 |
| LDL-C/HDL-C | 2.58 ± 0.821 | 2.30 ± 0.767 | 0.001a |
TC total cholesterol, TG triglycerides, LDL-C low-density lipoprotein cholesterol, LDL-C high-density lipoprotein cholesterol
ap value was calculated by independent samples t test
bp value was calculated by chi-squared test
p < 0.05 indicates statistical significance
Basic information of candidate SNPs of RETN gene in this study
| SNP ID | Gene | Band | Alleles A/B | MAF | HWE- | OR (95% CI) | ||
|---|---|---|---|---|---|---|---|---|
| Case | Control | |||||||
| rs7408174 | 19 | C/T | 0.265 | 0.233 | 0.556 | 1.19(0.86–1.64) | 0.287 | |
| rs34861192 | 19 | A/G | 0.136 | 0.198 | 0.654 | |||
| rs34124816 | 19 | A/C | 0.075 | 0.100 | 1.000 | 0.73(0.45–1.20) | 0.219 | |
| rs3219175 | 19 | A/G | 0.132 | 0.200 | 0.659 | |||
| rs3745367 | 19 | A/G | 0.324 | 0.390 | 0.882 | 0.75(0.56–1.00) | 0.052 | |
| rs3745368 | 19 | A/G | 0.113 | 0.171 | 1.000 | |||
| rs3745369 | 19 | C/G | 0.303 | 0.337 | 0.636 | 0.85(0.63–1.15) | 0.305 | |
| rs1477341 | 19 | A/T | 0.405 | 0.480 | 0.479 | |||
SNP single-nucleotide polymorphism, HWE Hardy–Weinberg equilibrium, OR odds ratio, 95% CI 95% confidence interval, MAF minor allele frequency
pa and pb were calculated by chi-squared test
Italicized values are statistically significant
*p < 0.05 indicates statistical significance
Analysis of the association between SNPs of RETN gene and steroid-induced ONFH risk
| SNP ID | Model | Genotype | Control | Case | OR (95% CI) | |
|---|---|---|---|---|---|---|
| rs34861192 | Codominant | GG | 130 | 146 | 1 | |
| AG | 61 | 52 | 0.76(0.49–1.18) | 0.220 | ||
| AA | 9 | 1 | ||||
| Dominant | GG | 130 | 146 | 1 | ||
| AG-AA | 70 | 53 | 0.67(0.44–1.03) | 0.071 | ||
| Recessive | GG-AG | 191 | 198 | 1 | ||
| AA | 9 | 1 | ||||
| Log-additive | – | – | – | |||
| rs3219175 | Codominant | GG | 129 | 146 | 1 | |
| AG | 62 | 50 | 0.71(0.46–1.11) | 0.133 | ||
| AA | 9 | 1 | ||||
| Dominant | GG | 129 | 146 | 1 | ||
| AG-AA | 71 | 51 | ||||
| Recessive | GG-AG | 191 | 196 | 1 | ||
| AA | 9 | 1 | ||||
| Log-additive | – | – | – | |||
| rs3745368 | Codominant | GG | 137 | 156 | 1 | |
| AG | 56 | 41 | 0.64(0.40–1.02) | 0.059 | ||
| AA | 6 | 2 | 0.29(0.06–1.45) | 0.131 | ||
| Dominant | GG | 137 | 156 | 1 | ||
| AG-AA | 62 | 43 | ||||
| Recessive | GG-AG | 193 | 197 | 1 | ||
| AA | 6 | 2 | 0.32(0.06–1.63) | 0.170 | ||
| Log-additive | – | – | – | |||
| rs1477341 | Codominant | TT | 51 | 68 | 1 | |
| AT | 105 | 90 | 0.64(0.41–1.02) | 0.059 | ||
| AA | 43 | 32 | 0.56(0.31–1.00) | 0.051 | ||
| Dominant | TT | 51 | 68 | 1 | ||
| AT-AA | 148 | 122 | ||||
| Recessive | TT-AT | 156 | 158 | 1 | ||
| AA | 43 | 32 | 0.74(0.44–1.23) | 0.239 | ||
| Log-additive | – | – | – |
SNP single-nucleotide polymorphism, OR odds ratio, 95% CI 95% confidence interval
p value adjusted for age was calculated by logistic regression
Italicized values are statistically significant
*p < 0.05 indicates statistical significance
The association of genotypes in RETN genes with the clinical phenotypes
| SNP | Genotype | Gender | Hip lesions | Clinical stages | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Male | Female | Unilateral | Bilateral | Stage II | Stage III | Stage IV | |||||
| rs7408174 | CC | 8 | 6 | 0.775 | 5 | 9 | 0.285 | 3 | 5 | 6 | 0.694 |
| CT | 42 | 35 | 18 | 59 | 19 | 39 | 19 | ||||
| TT | 64 | 43 | 36 | 71 | 24 | 50 | 33 | ||||
| rs34861192 | AA | 0 | 1 | 0.465 | 0 | 1 | 0.547 | 0 | 1 | 0 | 0.193 |
| AG | 29 | 23 | 18 | 34 | 15 | 28 | 9 | ||||
| GG | 86 | 60 | 41 | 105 | 32 | 65 | 49 | ||||
| rs34124816 | AA | 94 | 77 | 0.105 | 51 | 120 | 0.650 | 41 | 78 | 52 | 0.557 |
| CA | 20 | 6 | 8 | 18 | 6 | 14 | 6 | ||||
| CC | 1 | 1 | 0 | 2 | 0 | 2 | 0 | ||||
| rs3219175 | AA | 0 | 1 | 0.470 | 0 | 1 | 0.592 | 0 | 1 | 0 | 0.216 |
| AG | 28 | 22 | 17 | 33 | 15 | 26 | 9 | ||||
| GG | 86 | 60 | 41 | 105 | 31 | 66 | 49 | ||||
| rs3745367 | AA | 12 | 9 | 0.775 | 3 | 18 | 0.263 | 3 | 14 | 4 | |
| AG | 48 | 39 | 27 | 60 | 24 | 44 | 19 | ||||
| GG | 55 | 36 | 29 | 62 | 20 | 36 | 35 | ||||
| rs3745368 | AA | 1 | 1 | 0.308 | 0 | 2 | 0.650 | 0 | 2 | 0 | 0.613 |
| AG | 28 | 13 | 12 | 29 | 9 | 21 | 11 | ||||
| GG | 86 | 70 | 47 | 109 | 38 | 71 | 47 | ||||
| rs3745369 | CC | 8 | 6 | 0.876 | 4 | 10 | 0.059 | 2 | 11 | 1 | 0.161 |
| CG | 50 | 40 | 20 | 70 | 20 | 41 | 29 | ||||
| GG | 54 | 37 | 35 | 56 | 24 | 41 | 26 | ||||
| rs1477341 | AA | 24 | 8 | 0.063 | 9 | 23 | 0.809 | 6 | 21 | 5 | 0.090 |
| AT | 48 | 42 | 25 | 65 | 21 | 43 | 26 | ||||
| TT | 35 | 33 | 22 | 46 | 17 | 25 | 26 | ||||
p values were calculated by logistic regression
Italicized value is statistically significant
*p < 0.05 indicates statistical significance
The association of genotypes in RETN genes with the clinical phenotypes
| SNP | Genotype | TC (mmol/L) | TG (mmol/L) | HDL-C (mmol/L) | LDL-C (mmol/L) | TC/HDL-C | TG/HDL-C | LDL-C/HDL-C |
|---|---|---|---|---|---|---|---|---|
| rs34861192 | AA( | 4.84 | 2.91 | 1.08 | 2.61 | 4.48 | 2.69 | 2.42 |
| AG( | 4.71 ± 0.93 | 1.97 ± 1.32 | 1.05 ± 0.27 | 2.75 ± 0.77 | 4.72 ± 2.48 | 2.13 ± 1.79 | 2.75 ± 0.86 | |
| GG( | 4.43 ± 0.91 | 1.78 ± 1.50 | 1.07 ± 0.27 | 2.60 ± 0.76 | 4.30 ± 1.15 | 1.87 ± 1.98 | 2.52 ± 0.81 | |
| 0.156 | 0.551 | 0.073 | 0.587 | 0.090 | 0.653 | 0.670 | ||
| rs3219175 | AA ( | 4.84 | 2.91 | 1.08 | 2.61 | 4.48 | 2.69 | 2.42 |
| AG ( | 4.75 ± 0.93 | 2.01 ± 1.33 | 1.05 ± 0.28 | 2.77 ± 0.78 | 4.76 ± 1.23 | 2.17 ± 1.82 | 2.77 ± 0.87 | |
| GG ( | 4.42 ± 0.91 | 1.78 ± 1.50 | 1.07 ± 0.27 | 2.59 ± 0.76 | 4.29 ± 1.15 | 1.87 ± 1.98 | 2.51 ± 0.80 | |
| 0.097 | 0.492 | 0.835 | 0.356 | 0.058 | 0.587 | 0.152 | ||
| rs3745368 | AA ( | 4.11 ± 0.64 | 1.13 ± 0.01 | 1.14 ± 0.23 | 2.20 ± 0.80 | 4.38 ± 1.67 | 1.18 ± 0.26 | 2.40 ± 1.37 |
| AG ( | 4.37 ± 0.95 | 1.76 ± 1.61 | 1.04 ± 0.22 | 2.56 ± 0.81 | 4.35 ± 1.23 | 1.92 ± 2.24 | 2.55 ± 0.88 | |
| GG ( | 4.54 ± 0.91 | 1.87 ± 1.42 | 1.07 ± 0.28 | 2.66 ± 0.76 | 4.43 ± 1.17 | 1.96 ± 1.86 | 2.59 ± 0.80 | |
| 0.453 | 0.722 | 0.718 | 0.531 | 0.927 | 0.853 | 0.912 | ||
| rs1477341 | AA( | 2.00 ± 1.40 | 4.41 ± 0.82 | 1.01 ± 0.22 | 2.50 ± 0.71 | 4.52 ± 1.15 | 2.17 ± 1.69 | 2.56 ± 0.84 |
| AT( | 1.96 ± 1.47 | 4.57 ± 0.94 | 1.04 ± 0.25 | 2.71 ± 0.78 | 4.58 ± 1.16 | 2.10 ± 1.98 | 2.70 ± 0.79 | |
| TT( | 1.62 ± 1.53 | 4.45 ± 0.97 | 1.13 ± 0.30 | 2.58 ± 0.78 | 4.12 ± 1.19 | 1.65 ± 2.06 | 2.39 ± 0.84 | |
| 0.302 | 0.588 | 0.315 | 0.292 | 0.066 |
p values were calculated by logistic regression
Italicized values are statistically significant
*p < 0.05 indicates statistical significance
Fig. 1Haplotype block map for the eight SNPs in the RETN gene. Block 1 includes rs34861192 and rs3219175 with D’ = 1 (100%) for the corresponding variants