Literature DB >> 19170031

SNP genotyping using the Sequenom MassARRAY iPLEX platform.

Stacey Gabriel1, Liuda Ziaugra, Diana Tabbaa.   

Abstract

The method for SNP genotyping described in this unit is based on the commercially available Sequenom MassARRAY platform. The assay consists of an initial locus-specific PCR reaction, followed by single base extension using mass-modified dideoxynucleotide terminators of an oligonucleotide primer which anneals immediately upstream of the polymorphic site of interest. Using MALDI-TOF mass spectrometry, the distinct mass of the extended primer identifies the SNP allele.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19170031     DOI: 10.1002/0471142905.hg0212s60

Source DB:  PubMed          Journal:  Curr Protoc Hum Genet        ISSN: 1934-8258


  388 in total

1.  From Couinaud to molecular biology: the seven virtues of hepato-pancreato-biliary surgery.

Authors:  Jean-Nicolas Vauthey; Giuseppe Zimmitti; Junichi Shindoh
Journal:  HPB (Oxford)       Date:  2012-08       Impact factor: 3.647

2.  Genetic architecture of voluntary exercise in an advanced intercross line of mice.

Authors:  Scott A Kelly; Derrick L Nehrenberg; Jeremy L Peirce; Kunjie Hua; Brian M Steffy; Tim Wiltshire; Fernando Pardo-Manuel de Villena; Theodore Garland; Daniel Pomp
Journal:  Physiol Genomics       Date:  2010-04-13       Impact factor: 3.107

3.  An ancient founder mutation in PROKR2 impairs human reproduction.

Authors:  Magdalena Avbelj Stefanija; Marc Jeanpierre; Gerasimos P Sykiotis; Jacques Young; Richard Quinton; Ana Paula Abreu; Lacey Plummer; Margaret G Au; Ravikumar Balasubramanian; Andrew A Dwyer; Jose C Florez; Timothy Cheetham; Simon H Pearce; Radhika Purushothaman; Albert Schinzel; Michel Pugeat; Elka E Jacobson-Dickman; Svetlana Ten; Ana Claudia Latronico; James F Gusella; Catherine Dode; William F Crowley; Nelly Pitteloud
Journal:  Hum Mol Genet       Date:  2012-07-05       Impact factor: 6.150

4.  Improvement in the sensitivity of newborn screening for Fabry disease among females through the use of a high-throughput and cost-effective method, DNA mass spectrometry.

Authors:  Yung-Hsiu Lu; Po-Hsun Huang; Li-Yun Wang; Ting-Rong Hsu; Hsing-Yuan Li; Pi-Chang Lee; Yu-Ping Hsieh; Sheng-Che Hung; Yu-Chen Wang; Sheng-Kai Chang; Ya-Ting Lee; Ping-Hsun Ho; Hui-Chen Ho; Dau-Ming Niu
Journal:  J Hum Genet       Date:  2017-11-15       Impact factor: 3.172

5.  Identification of a shared protective genetic susceptibility locus for colorectal cancer and gastric cancer.

Authors:  Na He; Lijun Liu; Xianglong Duan; Li Wang; Dongya Yuan; Tianbo Jin; Longli Kang
Journal:  Tumour Biol       Date:  2015-09-17

6.  Clinical implications of family history of prostate cancer and genetic risk single nucleotide polymorphism (SNP) profiles in an active surveillance cohort.

Authors:  Chee L Goh; Edward J Saunders; Daniel A Leongamornlert; Malgorzata Tymrakiewicz; Karen Thomas; Elizabeth D Selvadurai; Ruth Woode-Amissah; Tokhir Dadaev; Nadiya Mahmud; Elena Castro; David Olmos; Michelle Guy; Koveela Govindasami; Lynne T O'Brien; Amanda L Hall; Rosemary A Wilkinson; Emma J Sawyer; Ali Amin Al Olama; Douglas F Easton; Zsofia Kote-Jarai; Chris C Parker; Rosalind A Eeles
Journal:  BJU Int       Date:  2013-01-15       Impact factor: 5.588

7.  Glucocorticoid receptor single nucleotide polymorphisms are associated with acute crisis pain in sickle cell disease.

Authors:  Ellie H Jhun; Nilanjana Sadhu; Yingwei Yao; Ying He; Robert E Molokie; Diana J Wilkie; Zaijie Jim Wang
Journal:  Pharmacogenomics       Date:  2018-08-06       Impact factor: 2.533

8.  Association between interleukin-18 promoter variants and tacrolimus pharmacokinetics in Chinese renal transplant patients.

Authors:  Jiazhen Xing; Xiaoqing Zhang; Junwei Fan; Bin Shen; Tongyi Men; Jianning Wang
Journal:  Eur J Clin Pharmacol       Date:  2014-12-10       Impact factor: 2.953

9.  Genetic variation in the TP63 gene is associated with lung cancer risk in the Han population.

Authors:  Qun-Ying Hu; Tian-Bo Jin; Li Wang; Le Zhang; Tingting Geng; Guinian Liang; Long-Li Kang
Journal:  Tumour Biol       Date:  2013-10-04

10.  Combined iPLEX and TaqMan assays to screen for 45 common mutations in Lynch syndrome and FAP patients.

Authors:  Dagmara Dymerska; Pablo Serrano-Fernández; Janina Suchy; Andrzej Pławski; Ryszard Słomski; Krzysztof Kaklewski; Rodney J Scott; Jacek Gronwald; Józef Kładny; Tomasz Byrski; Tomasz Huzarski; Jan Lubiński; Grzegorz Kurzawski
Journal:  J Mol Diagn       Date:  2009-12-10       Impact factor: 5.568

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.