Literature DB >> 32078756

Nonlinear dipole inversion (NDI) enables robust quantitative susceptibility mapping (QSM).

Daniel Polak1,2,3, Itthi Chatnuntawech4, Jaeyeon Yoon5, Siddharth Srinivasan Iyer2,6, Carlos Milovic7, Jongho Lee5, Peter Bachert1,8, Elfar Adalsteinsson6, Kawin Setsompop2,9,10, Berkin Bilgic2,9,10.   

Abstract

High-quality Quantitative Susceptibility Mapping (QSM) with Nonlinear Dipole Inversion (NDI) is developed with pre-determined regularization while matching the image quality of state-of-the-art reconstruction techniques and avoiding over-smoothing that these techniques often suffer from. NDI is flexible enough to allow for reconstruction from an arbitrary number of head orientations and outperforms COSMOS even when using as few as 1-direction data. This is made possible by a nonlinear forward-model that uses the magnitude as an effective prior, for which we derived a simple gradient descent update rule. We synergistically combine this physics-model with a Variational Network (VN) to leverage the power of deep learning in the VaNDI algorithm. This technique adopts the simple gradient descent rule from NDI and learns the network parameters during training, hence requires no additional parameter tuning. Further, we evaluate NDI at 7 T using highly accelerated Wave-CAIPI acquisitions at 0.5 mm isotropic resolution and demonstrate high-quality QSM from as few as 2-direction data.
© 2020 John Wiley & Sons, Ltd.

Entities:  

Keywords:  deep learning; nonlinear inversion; quantitative susceptibility mapping

Year:  2020        PMID: 32078756      PMCID: PMC7528217          DOI: 10.1002/nbm.4271

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  49 in total

1.  Magnetic susceptibility quantification for arbitrarily shaped objects in inhomogeneous fields.

Authors:  L Li
Journal:  Magn Reson Med       Date:  2001-11       Impact factor: 4.668

2.  Generalized autocalibrating partially parallel acquisitions (GRAPPA).

Authors:  Mark A Griswold; Peter M Jakob; Robin M Heidemann; Mathias Nittka; Vladimir Jellus; Jianmin Wang; Berthold Kiefer; Axel Haase
Journal:  Magn Reson Med       Date:  2002-06       Impact factor: 4.668

3.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

Authors:  Michael Lustig; David Donoho; John M Pauly
Journal:  Magn Reson Med       Date:  2007-12       Impact factor: 4.668

4.  Quantitative susceptibility map reconstruction from MR phase data using bayesian regularization: validation and application to brain imaging.

Authors:  Ludovic de Rochefort; Tian Liu; Bryan Kressler; Jing Liu; Pascal Spincemaille; Vincent Lebon; Jianlin Wu; Yi Wang
Journal:  Magn Reson Med       Date:  2010-01       Impact factor: 4.668

5.  Whole brain susceptibility mapping using compressed sensing.

Authors:  Bing Wu; Wei Li; Arnaud Guidon; Chunlei Liu
Journal:  Magn Reson Med       Date:  2011-06-10       Impact factor: 4.668

6.  Wave-CAIPI for highly accelerated 3D imaging.

Authors:  Berkin Bilgic; Borjan A Gagoski; Stephen F Cauley; Audrey P Fan; Jonathan R Polimeni; P Ellen Grant; Lawrence L Wald; Kawin Setsompop
Journal:  Magn Reson Med       Date:  2014-07-01       Impact factor: 4.668

7.  Quantitative susceptibility mapping using deep neural network: QSMnet.

Authors:  Jaeyeon Yoon; Enhao Gong; Itthi Chatnuntawech; Berkin Bilgic; Jingu Lee; Woojin Jung; Jingyu Ko; Hosan Jung; Kawin Setsompop; Greg Zaharchuk; Eung Yeop Kim; John Pauly; Jongho Lee
Journal:  Neuroimage       Date:  2018-06-15       Impact factor: 6.556

Review 8.  Quantitative susceptibility mapping: current status and future directions.

Authors:  E Mark Haacke; Saifeng Liu; Sagar Buch; Weili Zheng; Dongmei Wu; Yongquan Ye
Journal:  Magn Reson Imaging       Date:  2014-10-25       Impact factor: 2.546

9.  Phase reconstruction from multiple coil data using a virtual reference coil.

Authors:  Dennis L Parker; Allison Payne; Nick Todd; J Rock Hadley
Journal:  Magn Reson Med       Date:  2013-09-04       Impact factor: 4.668

10.  Quantitative susceptibility mapping (QSM) as a means to measure brain iron? A post mortem validation study.

Authors:  Christian Langkammer; Ferdinand Schweser; Nikolaus Krebs; Andreas Deistung; Walter Goessler; Eva Scheurer; Karsten Sommer; Gernot Reishofer; Kathrin Yen; Franz Fazekas; Stefan Ropele; Jürgen R Reichenbach
Journal:  Neuroimage       Date:  2012-05-24       Impact factor: 6.556

View more
  3 in total

1.  Single-step calculation of susceptibility through multiple orientation sampling.

Authors:  Lin Chen; Shuhui Cai; Peter C M van Zijl; Xu Li
Journal:  NMR Biomed       Date:  2021-04-06       Impact factor: 4.478

2.  Sub-acute Changes on MRI Measures of Cerebral Blood Flow and Venous Oxygen Saturation in Concussed Australian Rules Footballers.

Authors:  David K Wright; Terence J O'Brien; Sandy R Shultz
Journal:  Sports Med Open       Date:  2022-04-01

Review 3.  Quantitative susceptibility mapping as an imaging biomarker for Alzheimer's disease: The expectations and limitations.

Authors:  Yuto Uchida; Hirohito Kan; Keita Sakurai; Kenichi Oishi; Noriyuki Matsukawa
Journal:  Front Neurosci       Date:  2022-08-05       Impact factor: 5.152

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.