Literature DB >> 31887554

Succinyl-DOTOPA: An effective triradical dopant for low-temperature dynamic nuclear polarization with high solubility in aqueous solvent mixtures at neutral pH.

Wai-Ming Yau1, Jaekyun Jeon1, Robert Tycko2.   

Abstract

We report the synthesis of the nitroxide-based triradical compound succinyl-DOTOPA and the characterization of its performance as a dopant for dynamic nuclear polarization (DNP) experiments in frozen solutions at low temperatures. Compared with previously described DOTOPA derivatives, succinyl-DOTOPA has substantially greater solubility in glycerol/water mixtures with pH > 4 and therefore has wider applicability. Solid state nuclear magnetic resonance (ssNMR) measurements at 9.39 T and 25 K, with magic-angle spinning at 7.00 kHz, show that build-up times of DNP-enhanced, cross-polarized 13C ssNMR signals are shorter and that signal amplitudes are larger for glycerol/water solutions of L-proline containing succinyl-DOTOPA than for solutions containing the biradical AMUPol, with electron spin concentrations of 15 mM or 30 mM, resulting in greater net sensitivity gains from DNP. In similar measurements at 90 K, AMUPol yields greater net sensitivity, apparently due to its longer electron spin-lattice and spin-spin relaxation times. One- and two-dimensional 13C ssNMR measurements at 25 K on the complex of the 27-residue peptide M13 with the calcium-sensing protein calmodulin, in glycerol/water with 10 mM succinyl-DOTOPA, demonstrate the utility of this compound in DNP-enhanced ssNMR studies of biomolecular systems. Published by Elsevier Inc.

Entities:  

Keywords:  Dynamic nuclear polarization; Low-temperature magic-angle spinning; Solid state NMR

Mesh:

Substances:

Year:  2019        PMID: 31887554      PMCID: PMC6964257          DOI: 10.1016/j.jmr.2019.106672

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  33 in total

1.  Successive Stages of Amyloid-β Self-Assembly Characterized by Solid-State Nuclear Magnetic Resonance with Dynamic Nuclear Polarization.

Authors:  Alexey Potapov; Wai-Ming Yau; Rodolfo Ghirlando; Kent R Thurber; Robert Tycko
Journal:  J Am Chem Soc       Date:  2015-06-19       Impact factor: 15.419

2.  bcTol : a highly water-soluble biradical for efficient dynamic nuclear polarization of biomolecules.

Authors:  Anil P Jagtap; Michel-Andreas Geiger; Daniel Stöppler; Marcella Orwick-Rydmark; Hartmut Oschkinat; Snorri Th Sigurdsson
Journal:  Chem Commun (Camb)       Date:  2016-05-19       Impact factor: 6.222

3.  Solid state nuclear magnetic resonance with magic-angle spinning and dynamic nuclear polarization below 25 K.

Authors:  Kent R Thurber; Alexey Potapov; Wai-Ming Yau; Robert Tycko
Journal:  J Magn Reson       Date:  2012-11-21       Impact factor: 2.229

4.  Paramagnet induced signal quenching in MAS-DNP experiments in frozen homogeneous solutions.

Authors:  Björn Corzilius; Loren B Andreas; Albert A Smith; Qing Zhe Ni; Robert G Griffin
Journal:  J Magn Reson       Date:  2013-12-07       Impact factor: 2.229

5.  Measurement of sample temperatures under magic-angle spinning from the chemical shift and spin-lattice relaxation rate of 79Br in KBr powder.

Authors:  Kent R Thurber; Robert Tycko
Journal:  J Magn Reson       Date:  2008-09-25       Impact factor: 2.229

6.  Biomolecular solid state NMR with magic-angle spinning at 25K.

Authors:  Kent R Thurber; Robert Tycko
Journal:  J Magn Reson       Date:  2008-09-23       Impact factor: 2.229

7.  Cysteine-Specific Labeling of Proteins with a Nitroxide Biradical for Dynamic Nuclear Polarization NMR.

Authors:  Maxim A Voinov; Daryl B Good; Meaghan E Ward; Sergey Milikisiyants; Antonin Marek; Marc A Caporini; Melanie Rosay; Rachel A Munro; Milena Ljumovic; Leonid S Brown; Vladimir Ladizhansky; Alex I Smirnov
Journal:  J Phys Chem B       Date:  2015-07-31       Impact factor: 2.991

8.  Dynamic nuclear polarization-enhanced 13C NMR spectroscopy of static biological solids.

Authors:  Alexey Potapov; Wai-Ming Yau; Robert Tycko
Journal:  J Magn Reson       Date:  2013-02-27       Impact factor: 2.229

9.  Synthesis and evaluation of nitroxide-based oligoradicals for low-temperature dynamic nuclear polarization in solid state NMR.

Authors:  Wai-Ming Yau; Kent R Thurber; Robert Tycko
Journal:  J Magn Reson       Date:  2014-05-20       Impact factor: 2.229

10.  Rational design of dinitroxide biradicals for efficient cross-effect dynamic nuclear polarization.

Authors:  Dominik J Kubicki; Gilles Casano; Martin Schwarzwälder; Sébastien Abel; Claire Sauvée; Karthikeyan Ganesan; Maxim Yulikov; Aaron J Rossini; Gunnar Jeschke; Christophe Copéret; Anne Lesage; Paul Tordo; Olivier Ouari; Lyndon Emsley
Journal:  Chem Sci       Date:  2015-10-13       Impact factor: 9.825

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  6 in total

1.  Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.

Authors:  Rupam Ghosh; Rania Dumarieh; Yiling Xiao; Kendra K Frederick
Journal:  J Magn Reson       Date:  2022-01-31       Impact factor: 2.229

2.  Nitroxide-based triradical dopants for efficient low-temperature dynamic nuclear polarization in aqueous solutions over a broad pH range.

Authors:  Wai-Ming Yau; C Blake Wilson; Jaekyun Jeon; Robert Tycko
Journal:  J Magn Reson       Date:  2022-08-12       Impact factor: 2.734

Review 3.  Time-resolved solid state NMR of biomolecular processes with millisecond time resolution.

Authors:  Jaekyun Jeon; C Blake Wilson; Wai-Ming Yau; Kent R Thurber; Robert Tycko
Journal:  J Magn Reson       Date:  2022-08-17       Impact factor: 2.734

4.  Enhanced spatial resolution in magnetic resonance imaging by dynamic nuclear polarization at 5 K.

Authors:  Hsueh-Ying Chen; C Blake Wilson; Robert Tycko
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-23       Impact factor: 12.779

5.  Slice selection in low-temperature, DNP-enhanced magnetic resonance imaging by Lee-Goldburg spin-locking and phase modulation.

Authors:  Hsueh-Ying Chen; Robert Tycko
Journal:  J Magn Reson       Date:  2020-03-09       Impact factor: 2.229

6.  Time-resolved DEER EPR and solid-state NMR afford kinetic and structural elucidation of substrate binding to Ca2+-ligated calmodulin.

Authors:  Thomas Schmidt; Jaekyun Jeon; Wai-Ming Yau; Charles D Schwieters; Robert Tycko; G Marius Clore
Journal:  Proc Natl Acad Sci U S A       Date:  2022-02-08       Impact factor: 12.779

  6 in total

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