Literature DB >> 35151975

Stability of the nitroxide biradical AMUPol in intact and lysed mammalian cells.

Rupam Ghosh1, Rania Dumarieh1, Yiling Xiao1, Kendra K Frederick2.   

Abstract

Dynamic Nuclear Polarization (DNP) enhanced solid state NMR increases experimental sensitivity, potentially enabling detection of biomolecules at their physiological concentrations. The sensitivity of DNP experiments is due to the transfer of polarization from electron spins of free radicals to the nuclear spins of interest. Here, we investigate the reduction of AMUPol in both lysed and intact HEK293 cells. We find that nitroxide radicals are reduced with first order reduction kinetics by cell lysates at a rate of ∼ 12% of the added nitroxide radical concentration per hour. We also found that electroporation delivered a consistent amount of AMUPol to intact cells and that nitroxide radicals are reduced just slightly more rapidly (∼15% per hour) by intact cells than by cell lysates. The two nitroxide radicals of AMUPol are reduced independently and this leads to considerable accumulation of the DNP-silent monoradical form of AMUPol, particularly in preparations of intact cells where nearly half of the AMUPol is already reduced to the DNP silent monoradical form at the earliest experimental time points. This confirms that the loss of the DNP-active biradical form of AMUPol is faster than the nitroxide reduction rate. Finally, we investigate the effect of adding N-ethyl maleimide, a well-known inhibitor of thiol (-SH) group-based reduction of nitroxide biradicals in cells, on AMUPol reduction, cellular viability, and DNP performance. Although pre-treatment of cells with NEM effectively inhibited the reduction of AMUPol, exposure to NEM compromised cellular viability and, surprisingly, did not improve DNP performance. Collectively, these results indicate that, currently, the most effective strategy to obtain high DNP enhancements for DNP-assisted in-cell NMR is to minimize room temperature contact times with cellular constituents and suggest that the development of bio-resistant polarization agents for DNP could considerably increase the sensitivity of DNP-assisted in-cell NMR experiments.
Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  AMUPol; DNP NMR; In-cell EPR; In-cell NMR; Polarizing agent

Mesh:

Substances:

Year:  2022        PMID: 35151975      PMCID: PMC8961433          DOI: 10.1016/j.jmr.2022.107150

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  59 in total

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Authors:  Andrew G M Rankin; Julien Trébosc; Frédérique Pourpoint; Jean-Paul Amoureux; Olivier Lafon
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2.  Structural biology applications of solid state MAS DNP NMR.

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Journal:  J Magn Reson       Date:  2016-04-11       Impact factor: 2.229

3.  Evaluation of spin labels for in-cell EPR by analysis of nitroxide reduction in cell extract of Xenopus laevis oocytes.

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Review 5.  Nitroxide spin labels and EPR spectroscopy: A powerful association for protein dynamics studies.

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6.  Cryogenic Sample Loading into a Magic Angle Spinning Nuclear Magnetic Resonance Spectrometer that Preserves Cellular Viability.

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7.  Nitroxides as potential contrast enhancing agents for MRI application: influence of structure on the rate of reduction by rat hepatocytes, whole liver homogenate, subcellular fractions, and ascorbate.

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Journal:  Magn Reson Med       Date:  1987-12       Impact factor: 4.668

8.  In-Cell Sensitivity-Enhanced NMR of Intact Viable Mammalian Cells.

Authors:  Rupam Ghosh; Yiling Xiao; Jaka Kragelj; Kendra K Frederick
Journal:  J Am Chem Soc       Date:  2021-11-01       Impact factor: 15.419

9.  TinyPols: a family of water-soluble binitroxides tailored for dynamic nuclear polarization enhanced NMR spectroscopy at 18.8 and 21.1 T.

Authors:  Alicia Lund; Gilles Casano; Georges Menzildjian; Monu Kaushik; Gabriele Stevanato; Maxim Yulikov; Ribal Jabbour; Dorothea Wisser; Marc Renom-Carrasco; Chloé Thieuleux; Florian Bernada; Hakim Karoui; Didier Siri; Melanie Rosay; Ivan V Sergeyev; David Gajan; Moreno Lelli; Lyndon Emsley; Olivier Ouari; Anne Lesage
Journal:  Chem Sci       Date:  2020-02-05       Impact factor: 9.825

10.  Transport of charged small molecules after electropermeabilization - drift and diffusion.

Authors:  Esin B Sözer; C Florencia Pocetti; P Thomas Vernier
Journal:  BMC Biophys       Date:  2018-03-21       Impact factor: 4.778

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