Literature DB >> 35998398

Time-resolved solid state NMR of biomolecular processes with millisecond time resolution.

Jaekyun Jeon1, C Blake Wilson1, Wai-Ming Yau1, Kent R Thurber1, Robert Tycko2.   

Abstract

We review recent efforts to develop and apply an experimental approach to the structural characterization of transient intermediate states in biomolecular processes that involve large changes in molecular conformation or assembly state. This approach depends on solid state nuclear magnetic resonance (ssNMR) measurements that are performed at very low temperatures, typically 25-30 K, with signal enhancements from dynamic nuclear polarization (DNP). This approach also involves novel technology for initiating the process of interest, either by rapid mixing of two solutions or by a rapid inverse temperature jump, and for rapid freezing to trap intermediate states. Initiation by rapid mixing or an inverse temperature jump can be accomplished in approximately-one millisecond. Freezing can be accomplished in approximately 100 microseconds. Thus, millisecond time resolution can be achieved. Recent applications to the process by which the biologically essential calcium sensor protein calmodulin forms a complex with one of its target proteins and the process by which the bee venom peptide melittin converts from an unstructured monomeric state to a helical, tetrameric state after a rapid change in pH or temperature are described briefly. Future applications of millisecond time-resolved ssNMR are also discussed briefly. Published by Elsevier Inc.

Entities:  

Keywords:  Calmodulin; Dynamic nuclear polarization; Melittin; Nonequilibrium state; Solid state NMR; Transient intermediates

Mesh:

Substances:

Year:  2022        PMID: 35998398      PMCID: PMC9463123          DOI: 10.1016/j.jmr.2022.107285

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.734


  50 in total

1.  Solution structure of Ca(2+)-calmodulin reveals flexible hand-like properties of its domains.

Authors:  J J Chou; S Li; C B Klee; A Bax
Journal:  Nat Struct Biol       Date:  2001-11

2.  Temperature dependence of domain motions of calmodulin probed by NMR relaxation at multiple fields.

Authors:  Shou-Lin Chang; Attila Szabo; Nico Tjandra
Journal:  J Am Chem Soc       Date:  2003-09-17       Impact factor: 15.419

Review 3.  Dynamic nuclear polarization at high magnetic fields.

Authors:  Thorsten Maly; Galia T Debelouchina; Vikram S Bajaj; Kan-Nian Hu; Chan-Gyu Joo; Melody L Mak-Jurkauskas; Jagadishwar R Sirigiri; Patrick C A van der Wel; Judith Herzfeld; Richard J Temkin; Robert G Griffin
Journal:  J Chem Phys       Date:  2008-02-07       Impact factor: 3.488

4.  A novel microfluidic rapid freeze-quench device for trapping reactions intermediates for high field EPR analysis.

Authors:  Royi Kaufmann; Itamar Yadid; Daniella Goldfarb
Journal:  J Magn Reson       Date:  2013-03-06       Impact factor: 2.229

Review 5.  Chemoenzymatic Semisynthesis of Proteins.

Authors:  Robert E Thompson; Tom W Muir
Journal:  Chem Rev       Date:  2019-11-27       Impact factor: 60.622

6.  A compact intermediate state of calmodulin in the process of target binding.

Authors:  Yoshiteru Yamada; Tatsuhito Matsuo; Hiroyuki Iwamoto; Naoto Yagi
Journal:  Biochemistry       Date:  2012-05-01       Impact factor: 3.162

7.  19F Dynamic Nuclear Polarization at Fast Magic Angle Spinning for NMR of HIV-1 Capsid Protein Assemblies.

Authors:  Manman Lu; Mingzhang Wang; Ivan V Sergeyev; Caitlin M Quinn; Jochem Struppe; Melanie Rosay; Werner Maas; Angela M Gronenborn; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2019-04-01       Impact factor: 15.419

8.  Calcium binding to calmodulin and its globular domains.

Authors:  S Linse; A Helmersson; S Forsén
Journal:  J Biol Chem       Date:  1991-05-05       Impact factor: 5.157

9.  Succinyl-DOTOPA: An effective triradical dopant for low-temperature dynamic nuclear polarization with high solubility in aqueous solvent mixtures at neutral pH.

Authors:  Wai-Ming Yau; Jaekyun Jeon; Robert Tycko
Journal:  J Magn Reson       Date:  2019-12-20       Impact factor: 2.229

10.  Spatiotemporal Resolution of Conformational Changes in Biomolecules by Combining Pulsed Electron-Electron Double Resonance Spectroscopy with Microsecond Freeze-Hyperquenching.

Authors:  Tobias Hett; Tobias Zbik; Shatanik Mukherjee; Hideto Matsuoka; Wolfgang Bönigk; Daniel Klose; Christophe Rouillon; Norbert Brenner; Sebastian Peuker; Reinhard Klement; Heinz-Jürgen Steinhoff; Helmut Grubmüller; Reinhard Seifert; Olav Schiemann; U Benjamin Kaupp
Journal:  J Am Chem Soc       Date:  2021-04-27       Impact factor: 15.419

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