Literature DB >> 3186700

Translation of the sequence AGG-AGG yields 50% ribosomal frameshift.

R A Spanjaard1, J van Duin.   

Abstract

We have inserted the sequence 5'-AAG-GAGGU-3', which is complementary to the 3' terminus of Escherichia coli 16S rRNA, in a reading frame and analyzed its effect on the accuracy and overall rate of translation in vivo. Translation over the sequence yields a 50% ribosomal frameshift if the reading phase is A-AGG-AGG-U. The other two possible frames do not give shifts. The introduction of a UAA stop codon before (UAA-AGG-AGG-U) but not after (A-AGG-AGG-UAA) the AGG codons abolishes the frameshift. The change in the reading phase occurs exclusively to the +1 direction. Efficient frameshifting is also induced by the sequence A-AGA-AGA-U. The arginine codons AGG and AGA are read by minor tRNA. Suppression of frameshifting takes place when a gene for minor tRNA(Arg) is introduced on a multicopy plasmid. We suggest that frameshifting during translation of the A-AGG-AGG-U sequence is due to the erroneous decoding of the tandem AGG codons and arises by depletion of tRNA(Arg). The complementarity of tandem AGG codons to the 3' terminus of 16S rRNA is a coincidence and apparently not related to the shift. Replacing the AGG-AGG sequence by the optimal arginine codons CGU-CGU does not increase the overall rate of translation.

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Year:  1988        PMID: 3186700      PMCID: PMC282334          DOI: 10.1073/pnas.85.21.7967

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

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8.  Codon usage can affect efficiency of translation of genes in Escherichia coli.

Authors:  M Robinson; R Lilley; S Little; J S Emtage; G Yarranton; P Stephens; A Millican; M Eaton; G Humphreys
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9.  Codon usage and gene expression.

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10.  Reading frame switch caused by base-pair formation between the 3' end of 16S rRNA and the mRNA during elongation of protein synthesis in Escherichia coli.

Authors:  R B Weiss; D M Dunn; A E Dahlberg; J F Atkins; R F Gesteland
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  60 in total

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9.  Special peptidyl-tRNA molecules can promote translational frameshifting without slippage.

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10.  Genetic organization and molecular analysis of the EcoVIII restriction-modification system of Escherichia coli E1585-68 and its comparison with isospecific homologs.

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