Literature DB >> 31686052

Multiple direct interactions of TBP with the MYC oncoprotein.

Yong Wei1,2,3, Diana Resetca2,4, Zhe Li5, Isak Johansson-Åkhe1, Alexandra Ahlner1, Sara Helander1, Amelie Wallenhammar1, Vivian Morad1, Brian Raught2,4, Björn Wallner1, Tetsuro Kokubo5, Yufeng Tong3,6, Linda Z Penn7,8, Maria Sunnerhagen9.   

Abstract

Transcription factor c-MYC is a potent oncoprotein; however, the mechanism of transcriptional regulation via MYC-protein interactions remains poorly understood. The TATA-binding protein (TBP) is an essential component of the transcription initiation complex TFIID and is required for gene expression. We identify two discrete regions mediating MYC-TBP interactions using structural, biochemical and cellular approaches. A 2.4 -Å resolution crystal structure reveals that human MYC amino acids 98-111 interact with TBP in the presence of the amino-terminal domain 1 of TBP-associated factor 1 (TAF1TAND1). Using biochemical approaches, we have shown that MYC amino acids 115-124 also interact with TBP independently of TAF1TAND1. Modeling reveals that this region of MYC resembles a TBP anchor motif found in factors that regulate TBP promoter loading. Site-specific MYC mutants that abrogate MYC-TBP interaction compromise MYC activity. We propose that MYC-TBP interactions propagate transcription by modulating the energetic landscape of transcription initiation complex assembly.

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Year:  2019        PMID: 31686052     DOI: 10.1038/s41594-019-0321-z

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  48 in total

1.  An amino-terminal c-myc domain required for neoplastic transformation activates transcription.

Authors:  G J Kato; J Barrett; M Villa-Garcia; C V Dang
Journal:  Mol Cell Biol       Date:  1990-11       Impact factor: 4.272

Review 2.  Reflecting on 25 years with MYC.

Authors:  Natalie Meyer; Linda Z Penn
Journal:  Nat Rev Cancer       Date:  2008-12       Impact factor: 60.716

Review 3.  New insights into the function of transcription factor TFIID from recent structural studies.

Authors:  Gabor Papai; P Anthony Weil; Patrick Schultz
Journal:  Curr Opin Genet Dev       Date:  2011-03-21       Impact factor: 5.578

4.  Pre-Anchoring of Pin1 to Unphosphorylated c-Myc in a Fuzzy Complex Regulates c-Myc Activity.

Authors:  Sara Helander; Meri Montecchio; Robert Pilstål; Yulong Su; Jacob Kuruvilla; Malin Elvén; Javed M E Ziauddin; Madhanagopal Anandapadamanaban; Susana Cristobal; Patrik Lundström; Rosalie C Sears; Björn Wallner; Maria Sunnerhagen
Journal:  Structure       Date:  2015-11-19       Impact factor: 5.006

5.  Human TFIID binds to core promoter DNA in a reorganized structural state.

Authors:  Michael A Cianfrocco; George A Kassavetis; Patricia Grob; Jie Fang; Tamar Juven-Gershon; James T Kadonaga; Eva Nogales
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

6.  A central role for TFIID in the pluripotent transcription circuitry.

Authors:  W W M Pim Pijnappel; Daniel Esch; Marijke P A Baltissen; Guangming Wu; Nikolai Mischerikow; Atze J Bergsma; Erik van der Wal; Dong Wook Han; Hermann vom Bruch; Sören Moritz; Phillip Lijnzaad; A F Maarten Altelaar; Katrin Sameith; Holm Zaehres; Albert J R Heck; Frank C P Holstege; Hans R Schöler; H T Marc Timmers
Journal:  Nature       Date:  2013-03-17       Impact factor: 49.962

7.  MYC Interacts with the G9a Histone Methyltransferase to Drive Transcriptional Repression and Tumorigenesis.

Authors:  William B Tu; Yu-Jia Shiah; Corey Lourenco; Peter J Mullen; Dharmendra Dingar; Cornelia Redel; Aaliya Tamachi; Wail Ba-Alawi; Ahmed Aman; Rima Al-Awar; David W Cescon; Benjamin Haibe-Kains; Cheryl H Arrowsmith; Brian Raught; Paul C Boutros; Linda Z Penn
Journal:  Cancer Cell       Date:  2018-10-08       Impact factor: 31.743

8.  Structural basis of N-Myc binding by Aurora-A and its destabilization by kinase inhibitors.

Authors:  Mark W Richards; Selena G Burgess; Evon Poon; Anne Carstensen; Martin Eilers; Louis Chesler; Richard Bayliss
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-11       Impact factor: 11.205

9.  Transient structure and dynamics in the disordered c-Myc transactivation domain affect Bin1 binding.

Authors:  Cecilia Andresen; Sara Helander; Alexander Lemak; Christophe Farès; Veronika Csizmok; Jonas Carlsson; Linda Z Penn; Julie D Forman-Kay; Cheryl H Arrowsmith; Patrik Lundström; Maria Sunnerhagen
Journal:  Nucleic Acids Res       Date:  2012-03-28       Impact factor: 16.971

10.  Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.

Authors:  Robert K Louder; Yuan He; José Ramón López-Blanco; Jie Fang; Pablo Chacón; Eva Nogales
Journal:  Nature       Date:  2016-03-23       Impact factor: 49.962

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  17 in total

Review 1.  Target gene-independent functions of MYC oncoproteins.

Authors:  Apoorva Baluapuri; Elmar Wolf; Martin Eilers
Journal:  Nat Rev Mol Cell Biol       Date:  2020-02-18       Impact factor: 94.444

2.  Identifying and Validating MYC:Protein Interactors in Pursuit of Novel Anti-MYC Therapies.

Authors:  Diana Resetca; Alannah S MacDonald; Tristan M G Kenney; Yong Wei; Cheryl H Arrowsmith; Brian Raught; Linda Z Penn
Journal:  Methods Mol Biol       Date:  2021

3.  MYC amplifies gene expression through global changes in transcription factor dynamics.

Authors:  Simona Patange; David A Ball; Yihan Wan; Tatiana S Karpova; Michelle Girvan; David Levens; Daniel R Larson
Journal:  Cell Rep       Date:  2022-01-25       Impact factor: 9.423

4.  MYC assembles and stimulates topoisomerases 1 and 2 in a "topoisome".

Authors:  Subhendu K Das; Vladislav Kuzin; Donald P Cameron; Suzanne Sanford; Rajiv Kumar Jha; Zuqin Nie; Marta Trullols Rosello; Ronald Holewinski; Thorkell Andresson; Jan Wisniewski; Toyoaki Natsume; David H Price; Brian A Lewis; Fedor Kouzine; David Levens; Laura Baranello
Journal:  Mol Cell       Date:  2021-12-09       Impact factor: 17.970

5.  Trimeric complexes of Antp-TBP with TFIIEβ or Exd modulate transcriptional activity.

Authors:  Gustavo Jiménez-Mejía; Rubén Montalvo-Méndez; Carolina Hernández-Bautista; Claudia Altamirano-Torres; Martha Vázquez; Mario Zurita; Diana Reséndez-Pérez
Journal:  Hereditas       Date:  2022-05-30       Impact factor: 2.595

Review 6.  MYC protein interactors in gene transcription and cancer.

Authors:  Diana Resetca; Cornelia Redel; Corey Lourenco; Peter Lin; Alannah S MacDonald; Roberto Ciaccio; Tristan M G Kenney; Yong Wei; David W Andrews; Maria Sunnerhagen; Cheryl H Arrowsmith; Brian Raught; Linda Z Penn
Journal:  Nat Rev Cancer       Date:  2021-06-29       Impact factor: 60.716

7.  TFIID Enables RNA Polymerase II Promoter-Proximal Pausing.

Authors:  Charli B Fant; Cecilia B Levandowski; Kapil Gupta; Zachary L Maas; John Moir; Jonathan D Rubin; Andrew Sawyer; Meagan N Esbin; Jenna K Rimel; Olivia Luyties; Michael T Marr; Imre Berger; Robin D Dowell; Dylan J Taatjes
Journal:  Mol Cell       Date:  2020-03-30       Impact factor: 17.970

Review 8.  Structure and mechanism of the RNA polymerase II transcription machinery.

Authors:  Allison C Schier; Dylan J Taatjes
Journal:  Genes Dev       Date:  2020-04-01       Impact factor: 11.361

9.  A High-Throughput Screen for Transcription Activation Domains Reveals Their Sequence Features and Permits Prediction by Deep Learning.

Authors:  Ariel Erijman; Lukasz Kozlowski; Salma Sohrabi-Jahromi; James Fishburn; Linda Warfield; Jacob Schreiber; William S Noble; Johannes Söding; Steven Hahn
Journal:  Mol Cell       Date:  2020-05-15       Impact factor: 17.970

Review 10.  What do Transcription Factors Interact With?

Authors:  Haining Chen; B Franklin Pugh
Journal:  J Mol Biol       Date:  2021-02-20       Impact factor: 6.151

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