Literature DB >> 21420851

New insights into the function of transcription factor TFIID from recent structural studies.

Gabor Papai1, P Anthony Weil, Patrick Schultz.   

Abstract

The general transcription factor IID is a key player in the early events of gene expression. TFIID is a multisubunit complex composed of the TATA binding protein and at least 13 TBP associated factors (TAfs) which recognize the promoter of protein coding genes in an activator dependant way. This review highlights recent findings on the molecular architecture and dynamics of TFIID. The structural analysis of functional transcription complexes formed by TFIID, TFIIA, activators and/or promoter DNA illuminates the faculty of TFIID to adjust to various promoter architectures and highlights its role as a platform for preinitiation complex assembly.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID： 21420851      PMCID： PMC3081712          DOI： 10.1016/j.gde.2011.01.009

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN： 0959-437X            Impact factor:   5.578


  41 in total

1.  Three-dimensional structures of the TAFII-containing complexes TFIID and TFTC.

Authors:  M Brand; C Leurent; V Mallouh; L Tora; P Schultz
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

2.  Histone folds mediate selective heterodimerization of yeast TAF(II)25 with TFIID components yTAF(II)47 and yTAF(II)65 and with SAGA component ySPT7.

Authors:  Y G Gangloff; S L Sanders; C Romier; D Kirschner; P A Weil; L Tora; I Davidson
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

3.  Structure, function, and activator-induced conformations of the CRSP coactivator.

Authors:  Dylan J Taatjes; Anders M Näär; Frank Andel; Eva Nogales; Robert Tjian
Journal:  Science       Date:  2002-02-08       Impact factor: 47.728

4.  Mapping histone fold TAFs within yeast TFIID.

Authors:  Claire Leurent; Steven Sanders; Christine Ruhlmann; Véronique Mallouh; P Anthony Weil; Doris B Kirschner; Laszlo Tora; Patrick Schultz
Journal:  EMBO J       Date:  2002-07-01       Impact factor: 11.598

5.  Mapping key functional sites within yeast TFIID.

Authors:  Claire Leurent; Steven L Sanders; Màté A Demény; Krassimira A Garbett; Christine Ruhlmann; P Anthony Weil; Làszlò Tora; Patrick Schultz
Journal:  EMBO J       Date:  2004-02-12       Impact factor: 11.598

6.  Systematic analysis of essential yeast TAFs in genome-wide transcription and preinitiation complex assembly.

Authors:  Wu-Cheng Shen; Sukesh R Bhaumik; Helen C Causton; Itamar Simon; Xiaochun Zhu; Ezra G Jennings; Tseng-Hsing Wang; Richard A Young; Michael R Green
Journal:  EMBO J       Date:  2003-07-01       Impact factor: 11.598

7.  Three-dimensional structure of the human TFIID-IIA-IIB complex.

Authors:  F Andel; A G Ladurner; C Inouye; R Tjian; E Nogales
Journal:  Science       Date:  1999-12-10       Impact factor: 47.728

8.  Isolation of coactivators associated with the TATA-binding protein that mediate transcriptional activation.

Authors:  B D Dynlacht; T Hoey; R Tjian
Journal:  Cell       Date:  1991-08-09       Impact factor: 41.582

9.  Identification and distinct regulation of yeast TATA box-containing genes.

Authors:  Andrew D Basehoar; Sara J Zanton; B Franklin Pugh
Journal:  Cell       Date:  2004-03-05       Impact factor: 41.582

10.  Molecular characterization of Saccharomyces cerevisiae TFIID.

Authors:  Steven L Sanders; Krassimira A Garbett; P Anthony Weil
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272
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  33 in total

1.  Identification of a transcriptional activation domain in yeast repressor activator protein 1 (Rap1) using an altered DNA-binding specificity variant.

Authors:  Amanda N Johnson; P Anthony Weil
Journal:  J Biol Chem       Date:  2017-02-14       Impact factor: 5.157

Review 2.  Gene-specific transcription activation via long-range allosteric shape-shifting.

Authors:  Chung-Jung Tsai; Ruth Nussinov
Journal:  Biochem J       Date:  2011-10-01       Impact factor: 3.857

3.  Structure, assembly and dynamics of macromolecular complexes by single particle cryo-electron microscopy.

Authors:  Alexandre Durand; Gabor Papai; Patrick Schultz
Journal:  J Nanobiotechnology       Date:  2013-12-10       Impact factor: 10.435

4.  Taspase1 processing alters TFIIA cofactor properties in the regulation of TFIID.

Authors:  Barbora Malecová; Valentina S Caputo; Diane F Lee; James J Hsieh; Thomas Oelgeschläger
Journal:  Transcription       Date:  2015

5.  X-linked Dystonia-Parkinsonism patient cells exhibit altered signaling via nuclear factor-kappa B.

Authors:  Christine A Vaine; David Shin; Christina Liu; William T Hendriks; Jyotsna Dhakal; Kyle Shin; Nutan Sharma; D Cristopher Bragg
Journal:  Neurobiol Dis       Date:  2016-12-22       Impact factor: 5.996

6.  The C Terminus of the RNA Polymerase II Transcription Factor IID (TFIID) Subunit Taf2 Mediates Stable Association of Subunit Taf14 into the Yeast TFIID Complex.

Authors:  Jordan T Feigerle; P Anthony Weil
Journal:  J Biol Chem       Date:  2016-09-01       Impact factor: 5.157

7.  Interpreting the regulatory genome: the genomics of transcription factor function in Drosophila melanogaster.

Authors:  Matthew Slattery; Nicolas Nègre; Kevin P White
Journal:  Brief Funct Genomics       Date:  2012-09       Impact factor: 4.241

8.  A short cis-acting motif in the M112-113 promoter region is essential for IE3 to activate M112-113 gene expression and is important for murine cytomegalovirus replication.

Authors:  Kareni J Perez; Francisco Puerta Martínez; Ruth Cosme-Cruz; Neysa M Perez-Crespo; Qiyi Tang
Journal:  J Virol       Date:  2012-12-19       Impact factor: 5.103

9.  Human TFIID binds to core promoter DNA in a reorganized structural state.

Authors:  Michael A Cianfrocco; George A Kassavetis; Patricia Grob; Jie Fang; Tamar Juven-Gershon; James T Kadonaga; Eva Nogales
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

10.  De novo mutations in genes of mediator complex causing syndromic intellectual disability: mediatorpathy or transcriptomopathy?

Authors:  Alfonso Caro-Llopis; Monica Rosello; Carmen Orellana; Silvestre Oltra; Sandra Monfort; Sonia Mayo; Francisco Martinez
Journal:  Pediatr Res       Date:  2016-08-08       Impact factor: 3.756
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