Literature DB >> 34890565

MYC assembles and stimulates topoisomerases 1 and 2 in a "topoisome".

Subhendu K Das1, Vladislav Kuzin2, Donald P Cameron2, Suzanne Sanford1, Rajiv Kumar Jha1, Zuqin Nie1, Marta Trullols Rosello2, Ronald Holewinski3, Thorkell Andresson3, Jan Wisniewski4, Toyoaki Natsume5, David H Price6, Brian A Lewis1, Fedor Kouzine1, David Levens7, Laura Baranello8.   

Abstract

High-intensity transcription and replication supercoil DNA to levels that can impede or halt these processes. As a potent transcription amplifier and replication accelerator, the proto-oncogene MYC must manage this interfering torsional stress. By comparing gene expression with the recruitment of topoisomerases and MYC to promoters, we surmised a direct association of MYC with topoisomerase 1 (TOP1) and TOP2 that was confirmed in vitro and in cells. Beyond recruiting topoisomerases, MYC directly stimulates their activities. We identify a MYC-nucleated "topoisome" complex that unites TOP1 and TOP2 and increases their levels and activities at promoters, gene bodies, and enhancers. Whether TOP2A or TOP2B is included in the topoisome is dictated by the presence of MYC versus MYCN, respectively. Thus, in vitro and in cells, MYC assembles tools that simplify DNA topology and promote genome function under high output conditions.
Copyright © 2021 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DNA topology; Myc; TOP1; TOP2; Topoisomerase; Transcription; cancer; chromatin; polymerase; supercoiling

Mesh:

Substances:

Year:  2021        PMID: 34890565      PMCID: PMC8750365          DOI: 10.1016/j.molcel.2021.11.016

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  108 in total

1.  Direct activation of RNA polymerase III transcription by c-Myc.

Authors:  Natividad Gomez-Roman; Carla Grandori; Robert N Eisenman; Robert J White
Journal:  Nature       Date:  2003-01-16       Impact factor: 49.962

2.  Fork rotation and DNA precatenation are restricted during DNA replication to prevent chromosomal instability.

Authors:  Stephanie A Schalbetter; Sahar Mansoubi; Anna L Chambers; Jessica A Downs; Jonathan Baxter
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-03       Impact factor: 11.205

Review 3.  Target gene-independent functions of MYC oncoproteins.

Authors:  Apoorva Baluapuri; Elmar Wolf; Martin Eilers
Journal:  Nat Rev Mol Cell Biol       Date:  2020-02-18       Impact factor: 94.444

Review 4.  Orchestrating high-throughput genomic analysis with Bioconductor.

Authors:  Wolfgang Huber; Vincent J Carey; Robert Gentleman; Simon Anders; Marc Carlson; Benilton S Carvalho; Hector Corrada Bravo; Sean Davis; Laurent Gatto; Thomas Girke; Raphael Gottardo; Florian Hahne; Kasper D Hansen; Rafael A Irizarry; Michael Lawrence; Michael I Love; James MacDonald; Valerie Obenchain; Andrzej K Oleś; Hervé Pagès; Alejandro Reyes; Paul Shannon; Gordon K Smyth; Dan Tenenbaum; Levi Waldron; Martin Morgan
Journal:  Nat Methods       Date:  2015-02       Impact factor: 28.547

5.  Human topoisomerase IIalpha rapidly relaxes positively supercoiled DNA: implications for enzyme action ahead of replication forks.

Authors:  A Kathleen McClendon; A Chapin Rodriguez; Neil Osheroff
Journal:  J Biol Chem       Date:  2005-09-27       Impact factor: 5.157

6.  c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells.

Authors:  Zuqin Nie; Gangqing Hu; Gang Wei; Kairong Cui; Arito Yamane; Wolfgang Resch; Ruoning Wang; Douglas R Green; Lino Tessarollo; Rafael Casellas; Keji Zhao; David Levens
Journal:  Cell       Date:  2012-09-28       Impact factor: 41.582

7.  Transcriptional amplification in tumor cells with elevated c-Myc.

Authors:  Charles Y Lin; Jakob Lovén; Peter B Rahl; Ronald M Paranal; Christopher B Burge; James E Bradner; Tong Ihn Lee; Richard A Young
Journal:  Cell       Date:  2012-09-28       Impact factor: 41.582

8.  Active heterodimers are formed from human DNA topoisomerase II alpha and II beta isoforms.

Authors:  H Biersack; S Jensen; I Gromova; I S Nielsen; O Westergaard; A H Andersen
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-06       Impact factor: 11.205

9.  Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders.

Authors:  Liis Uusküla-Reimand; Huayun Hou; Payman Samavarchi-Tehrani; Matteo Vietri Rudan; Minggao Liang; Alejandra Medina-Rivera; Hisham Mohammed; Dominic Schmidt; Petra Schwalie; Edwin J Young; Jüri Reimand; Suzana Hadjur; Anne-Claude Gingras; Michael D Wilson
Journal:  Genome Biol       Date:  2016-08-31       Impact factor: 13.583

10.  Sequence specificity incompletely defines the genome-wide occupancy of Myc.

Authors:  Jiannan Guo; Tiandao Li; Joshua Schipper; Kyle A Nilson; Francis K Fordjour; Jeffrey J Cooper; Raluca Gordân; David H Price
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

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  4 in total

1.  MYC in TOP shape.

Authors:  Eytan Zlotorynski
Journal:  Nat Rev Mol Cell Biol       Date:  2022-02       Impact factor: 94.444

2.  TOP1 CAD-seq: A protocol to map catalytically engaged topoisomerase 1 in human cells.

Authors:  Vladislav Kuzin; Anika Wiegard; Donald P Cameron; Laura Baranello
Journal:  STAR Protoc       Date:  2022-08-01

3.  Direct hOGG1-Myc interactions inhibit hOGG1 catalytic activity and recruit Myc to its promoters under oxidative stress.

Authors:  Disha M Bangalore; Ingrid Tessmer
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

4.  Topoisomerase 1-dependent R-loop deficiency drives accelerated replication and genomic instability.

Authors:  Dan Sarni; Sonia Barroso; Alon Shtrikman; Michal Irony-Tur Sinai; Yifat S Oren; Andrés Aguilera; Batsheva Kerem
Journal:  Cell Rep       Date:  2022-09-27       Impact factor: 9.995

  4 in total

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