| Literature DB >> 31531230 |
Eliza Courtney1, Amanda Kay-Lyn Chok1, Zoe Li Ting Ang1, Tarryn Shaw1, Shao-Tzu Li1, Jeanette Yuen1, Joanne Ngeow1,2.
Abstract
Cascade testing for cancer predisposition offers a highly efficient and cost-effective method for identifying individuals at increased risk for cancer, in whom targeted interventions can often improve survival. The aim of this study was to determine the impact of free cascade testing on uptake and identify other associated factors. Demographic and clinical data were gathered prospectively for 183 probands found to have a pathogenic variant associated with cancer predisposition and their 826 first-degree relatives (FDRs). The provision of free cascade testing was significantly associated with uptake (21.6% vs 6.1%; χ 2, P < 0.001). Relationship type between FDR and proband and FDR age also demonstrated significant associations, suggesting greater engagement amongst younger generations. Overall, 29.0% (53/183) of families had at least 1 FDR who underwent cascade testing. Of these families, 67.9% (36/53) had an uptake rate of at least 40.0%. Cost is a significant barrier to cascade testing uptake in Singapore. Tailored interventions targeting underrepresented groups and genetic counseling approaches supporting family communication and decision-making are necessary.Entities:
Keywords: Genetic counselling; Genetic testing; Genetics research; Health policy; Preventive medicine
Year: 2019 PMID: 31531230 PMCID: PMC6744424 DOI: 10.1038/s41525-019-0096-5
Source DB: PubMed Journal: NPJ Genom Med ISSN: 2056-7944 Impact factor: 8.617
Demographics of probands and tested FDRs
| Variable | Probands ( | FDRs ( |
|---|---|---|
|
| ||
| Mean (CI) | 45.7 (43.6–47.9) | 38.9 (35.7–42.11) |
|
| ||
| Male (%) | 33 (18.0) | 41 (36.6) |
| Female (%) | 150 (82.0) | 71 (63.4) |
|
| ||
| Chinese (%) | 136 (74.3) | 80 (71.4) |
| Malay (%) | 28 (15.3) | 20 (17.8) |
| Indian (%) | 11 (6.0) | 6 (5.4) |
| Others (%) | 8 (4.4) | 6 (5.4) |
|
| ||
| Symptomatic (%) | 180 (98.4) | 22 (19.6) |
| Asymptomatic (%) | 3 (1.6) | 90 (80.4) |
|
| ||
| Tier 1 (%) | 104 (56.8) | 56 (50.0) |
| Syndromic (%) | 55 (30.1) | 47 (42.0) |
| Emerging evidence (%) | 24 (13.1) | 9 (8.0) |
|
| ||
| Eligible (%) | 65 (35.5) | 23 (20.5) |
| Not eligible (%) | 118 (64.5) | 89 (79.5) |
|
| ||
| PV/LPV detected (%) | 183 (100.0) | 53 (47.3) |
| PV/LPV not detected (%) | 0 (0.0) | 59 (52.7) |
CI confidence interval (95%), FDR first-degree relative, LKCNCCS Lee Kong Chian National Cancer Centre Singapore Cancer Genetics Service fund, PV/LPV pathogenic variant/likely pathogenic variant
aPhenotype associated with familial PV/LPV present (symptomatic) or absent (asymptomatic) at time of testing
bSee Supplementary Table 1 for genes included in each cohort
Proband and FDR factors associated with uptake of cascade testing amongst FDRs
| Variable | Tier 1 cohorta ( | Syndromic cohorta ( | Emerging evidence cohorta ( | Total cohort ( | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Tested | Not tested | Tested | Not tested | Tested | Not tested | Tested | Not tested | |||||
| Number | ||||||||||||
| 56 (12.4) | 397 (87.6) | — | 47 (19.7) | 191 (80.3) | — | 9 (6.7) | 126 (93.3) | — | 112 (13.3) | 714 (86.4) | — | |
| FDR factors | ||||||||||||
|
| ||||||||||||
| Male (%) | 19 (8.6) | 201 (91.4) |
| 18 (16.2) | 93 (83.8) | 0.201 | 4 (6.5) | 58 (93.5) | 1.000c | 41 (10.4) | 352 (89.6) |
|
| Female (%) | 37 (15.9) | 196 (84.1) | 29 (22.8) | 98 (77.2) | 5 (6.8) | 68 (93.2) | 71 (16.4) | 362 (83.6) | ||||
|
| ||||||||||||
| Chinese (%) | 42 (13.5) | 270 (86.5) | 0.374 | 29 (16.6) | 146 (83.4) |
| 9 (7.7) | 108 (92.3) | 0.476 | 80 (13.2) | 524 (86.8) | 0.609 |
| Malay (%) | 9 (10.30) | 78 (89.7) | 11 (21.6) | 40 (78.4) | 0 (0.0) | 15 (100.0) | 20 (13.1) | 133 (86.9) | ||||
| Indian (%) | 5 (13.5) | 32 (86.5) | 1 (50.0) | 1 (50.0) | 0 (0.0) | 3 (100.0) | 6 (14.3) | 36 (85.7) | ||||
| Others (%) | 0 (0.0) | 17 (100.0) | 6 (60.0) | 4 (40.0) | 0 (0.0) | 0 (0.0) | 6 (22.2) | 21 (77.8) | ||||
|
| ||||||||||||
| Mean (CI) | 47.0 (43.4–50.7) | 52.1 (50.5–53.7) |
| 30.1 (24.9–35.2) | 43.3 (40.3–46.4) |
| 34.6 (27.0–42.1) | 55.1 (52.5–57.8) |
| 38.9 (35.7–42.1) | 50.3 (48.9–51.6) |
|
|
| ||||||||||||
| Symptomatic (%) | 8 (11.9) | 59 (88.1) | 0.910 | 13 (40.6) | 19 (59.4) |
| 1 (9.1) | 10 (90.9) | 0.546c | 22 (20.0) | 88 (80.0) |
|
| Asymptomatic (%) | 48 (12.4) | 338 (87.6) | 34 (16.5) | 172 (83.5) | 8 (6.5) | 116 (93.5) | 90 (12.6) | 626 (87.4) | ||||
|
| ||||||||||||
| Sibling (%) | 31 (10.4) | 268 (89.6) |
| 17 (13.1) | 113 (86.9) |
| 1 (1.0) | 95 (99.0) |
| 49 (9.3) | 476 (90.7) |
|
| Parent (%) | 5 (8.1) | 57 (91.9) | 17 (27.9) | 44 (72.1) | 2 (11.1) | 16 (88.9) | 24 (17.0) | 117 (83.0) | ||||
| Offspring (%) | 20 (21.7) | 72 (78.3) | 13 (27.7) | 34 (72.3) | 6 (28.6) | 15 (71.4) | 39 (24.4) | 121 (75.6) | ||||
|
| ||||||||||||
| Free (%) | 45 (20.1) | 179 (79.9) |
| 36 (43.4) | 47 (56.6) |
| 5 (5.4) | 87 (94.6) | 0.465c | 86 (21.6) | 313 (78.4) |
|
| Not Free (%) | 11 (4.8) | 218 (95.2) | 11 (7.1) | 144 (92.9) | 4 (9.3) | 39 (90.7) | 26 (6.1) | 401 (93.9) | ||||
| Proband | ||||||||||||
|
| ||||||||||||
| Male (%) | 3 (9.4) | 29 (90.6) | 0.783c | 19 (19.4) | 79 (80.6) | 0.907 | 3 (25.0) | 9 (75.0) |
| 25 (17.6) | 117 (82.4) | 0.122 |
| Female (%) | 53 (12.6) | 368 (87.4) | 28 (20.0) | 112 (80.0) | 6 (4.9) | 117 (95.1) | 87 (12.7) | 597 (87.3) | ||||
|
| ||||||||||||
| Chinese (%) | 42 (13.1) | 279 (86.9) | 0.449 | 28 (15.7) | 150 (83.4) |
| 9 (7.7) | 108 (92.3) | 0.476 | 79 (12.8) | 537 (87.2) | 0.322 |
| Malay (%) | 9 (11.5) | 69 (88.5) | 11 (23.4) | 36 (76.6) | 0 (0.0) | 15 (100.0) | 20 (14.3) | 120 (85.7) | ||||
| Indian (%) | 5 (13.5) | 32 (86.5) | 1 (50.0) | 1 (50.0) | 0 (0.0) | 3 (100.0) | 6 (14.3) | 36 (85.7) | ||||
| Others (%) | 0 (0.0) | 17 (100.0) | 7 (63.6) | 4 (36.4) | 0 (0.0) | 0 (0.0) | 7 (25.0) | 21 (75.0) | ||||
|
| ||||||||||||
| Mean (CI) | 54.1 (50.8–57.5) | 53.0 (51.9–54.0) | 0.429d | 27.6 (22.9–32.3) | 42.5 (40.6–44.5) |
| 48.2 (32.7–63.8) | 54.0 (52.4–55.5) | 0.422d | 42.5 (38.9–46.1) | 50.3 (49.5–51.2) |
|
|
| ||||||||||||
| Eligible (%) | 16 (9.8) | 147 (90.2) | 0.217 | 26 (28.0) | 67 (72.0) |
| 2 (3.6) | 54 (96.4) | 0.305c | 44 (14.1) | 268 (85.9) | 0.722 |
| Not eligible (%) | 40 (13.8) | 250 (86.2) | 21 (14.5) | 124 (85.5) | 7 (8.9) | 72 (91.1) | 68 (13.2) | 446 (86.8) | ||||
CI confidence interval (95%), FDR first-degree relative, LKCNCCS Lee Kong Chian National Cancer Centre Singapore Cancer Genetics Service fund, PV/LPV pathogenic variant/likely pathogenic variant
aSee Supplementary Table 1 for genes included in each cohort
bPhenotype associated with familial PV/LPV present (symptomatic) or absent (asymptomatic) at time of testing
cFisher’s Exact Test
dIndependent sample t-test
Chi-square (X2) test was used, unless otherwise specified. Bold values indicate statistical significance p < 0.05
Fig. 1Number of families with FDRs undergoing cascade testing, by proportion of FDRs (n, %). The majority of families (71.0%) had no FDRs undergo cascade testing. Amongst the remaining 29.0% of families, more than two-thirds (67.9%) had ≥40.0% of FDRs undergo cascade testing. FDR first-degree relative
Duration from the report date of the proband’s genetic result to FDR testing
| Variable | Category | Mean (CI) | |
|---|---|---|---|
| Duration to FDR testing (days) | Free | 83.1 (65.3–100.9) |
|
| Not free | 212.6 (140.9–284.2) |
CI confidence interval (95%), FDR first-degree relative
aIndependent sample t-test
Statistically significant P-values (<0.05) are shown in bold
Proportion of FDRs accessing laboratory-provided free testing, by LKCNCCS subsidy eligibility
| Variable | Category | ||
|---|---|---|---|
|
| Free testing by laboratory | 12 (52.2) | 0.835 |
| Not free testing by laboratory | 11 (47.8) | ||
|
| Free testing by laboratory | 61 (68.5) |
|
| Not free testing by laboratory | 28 (31.5) |
FDR first-degree relative, LKCNCCS Lee Kong Chian National Cancer Centre Singapore Cancer Genetics Service fund
aChi-square (χ2) test
Statistically significant P-values (<0.05) are shown in bold