Literature DB >> 31341281

Soil nematode abundance and functional group composition at a global scale.

Johan van den Hoogen1, Stefan Geisen2,3, Devin Routh2, Howard Ferris4, Walter Traunspurger5, David A Wardle6, Ron G M de Goede7, Byron J Adams8, Wasim Ahmad9, Walter S Andriuzzi10, Richard D Bardgett11, Michael Bonkowski12, Raquel Campos-Herrera13, Juvenil E Cares14, Tancredi Caruso15, Larissa de Brito Caixeta14, Xiaoyun Chen16, Sofia R Costa17, Rachel Creamer7, José Mauro da Cunha Castro18, Marie Dam19, Djibril Djigal20, Miguel Escuer21, Bryan S Griffiths22, Carmen Gutiérrez21, Karin Hohberg23, Daria Kalinkina24, Paul Kardol25, Alan Kergunteuil26, Gerard Korthals3, Valentyna Krashevska27, Alexey A Kudrin28, Qi Li29, Wenju Liang29, Matthew Magilton15, Mariette Marais30, José Antonio Rodríguez Martín31, Elizaveta Matveeva24, El Hassan Mayad32, Christian Mulder33, Peter Mullin34, Roy Neilson35, T A Duong Nguyen12,36, Uffe N Nielsen37, Hiroaki Okada38, Juan Emilio Palomares Rius39, Kaiwen Pan40, Vlada Peneva41, Loïc Pellissier42,43, Julio Carlos Pereira da Silva44, Camille Pitteloud42, Thomas O Powers34, Kirsten Powers34, Casper W Quist45,46, Sergio Rasmann47, Sara Sánchez Moreno48, Stefan Scheu27,49, Heikki Setälä50, Anna Sushchuk24, Alexei V Tiunov51, Jean Trap52, Wim van der Putten3,46, Mette Vestergård53, Cecile Villenave52,54, Lieven Waeyenberge55, Diana H Wall10, Rutger Wilschut3, Daniel G Wright56, Jiue-In Yang57, Thomas Ward Crowther58.   

Abstract

Soil organisms are a crucial part of the terrestrial biosphere. Despite their importance for ecosystem functioning, few quantitative, spatially explicit models of the active belowground community currently exist. In particular, nematodes are the most abundant animals on Earth, filling all trophic levels in the soil food web. Here we use 6,759 georeferenced samples to generate a mechanistic understanding of the patterns of the global abundance of nematodes in the soil and the composition of their functional groups. The resulting maps show that 4.4 ± 0.64 × 1020 nematodes (with a total biomass of approximately 0.3 gigatonnes) inhabit surface soils across the world, with higher abundances in sub-Arctic regions (38% of total) than in temperate (24%) or tropical (21%) regions. Regional variations in these global trends also provide insights into local patterns of soil fertility and functioning. These high-resolution models provide the first steps towards representing soil ecological processes in global biogeochemical models and will enable the prediction of elemental cycling under current and future climate scenarios.

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Year:  2019        PMID: 31341281     DOI: 10.1038/s41586-019-1418-6

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  28 in total

1.  The diversity and biogeography of soil bacterial communities.

Authors:  Noah Fierer; Robert B Jackson
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-09       Impact factor: 11.205

2.  Fungal biogeography. Global diversity and geography of soil fungi.

Authors:  Leho Tedersoo; Mohammad Bahram; Sergei Põlme; Urmas Kõljalg; Nourou S Yorou; Ravi Wijesundera; Luis Villarreal Ruiz; Aída M Vasco-Palacios; Pham Quang Thu; Ave Suija; Matthew E Smith; Cathy Sharp; Erki Saluveer; Alessandro Saitta; Miguel Rosas; Taavi Riit; David Ratkowsky; Karin Pritsch; Kadri Põldmaa; Meike Piepenbring; Cherdchai Phosri; Marko Peterson; Kaarin Parts; Kadri Pärtel; Eveli Otsing; Eduardo Nouhra; André L Njouonkou; R Henrik Nilsson; Luis N Morgado; Jordan Mayor; Tom W May; Luiza Majuakim; D Jean Lodge; Su See Lee; Karl-Henrik Larsson; Petr Kohout; Kentaro Hosaka; Indrek Hiiesalu; Terry W Henkel; Helery Harend; Liang-dong Guo; Alina Greslebin; Gwen Grelet; Jozsef Geml; Genevieve Gates; William Dunstan; Chris Dunk; Rein Drenkhan; John Dearnaley; André De Kesel; Tan Dang; Xin Chen; Franz Buegger; Francis Q Brearley; Gregory Bonito; Sten Anslan; Sandra Abell; Kessy Abarenkov
Journal:  Science       Date:  2014-11-28       Impact factor: 47.728

Review 3.  Belowground biodiversity and ecosystem functioning.

Authors:  Richard D Bardgett; Wim H van der Putten
Journal:  Nature       Date:  2014-11-27       Impact factor: 49.962

4.  Quantifying global soil carbon losses in response to warming.

Authors:  T W Crowther; K E O Todd-Brown; C W Rowe; W R Wieder; J C Carey; M B Machmuller; B L Snoek; S Fang; G Zhou; S D Allison; J M Blair; S D Bridgham; A J Burton; Y Carrillo; P B Reich; J S Clark; A T Classen; F A Dijkstra; B Elberling; B A Emmett; M Estiarte; S D Frey; J Guo; J Harte; L Jiang; B R Johnson; G Kröel-Dulay; K S Larsen; H Laudon; J M Lavallee; Y Luo; M Lupascu; L N Ma; S Marhan; A Michelsen; J Mohan; S Niu; E Pendall; J Peñuelas; L Pfeifer-Meister; C Poll; S Reinsch; L L Reynolds; I K Schmidt; S Sistla; N W Sokol; P H Templer; K K Treseder; J M Welker; M A Bradford
Journal:  Nature       Date:  2016-11-30       Impact factor: 49.962

5.  Structure and function of the global topsoil microbiome.

Authors:  Mohammad Bahram; Falk Hildebrand; Sofia K Forslund; Jennifer L Anderson; Nadejda A Soudzilovskaia; Peter M Bodegom; Johan Bengtsson-Palme; Sten Anslan; Luis Pedro Coelho; Helery Harend; Jaime Huerta-Cepas; Marnix H Medema; Mia R Maltz; Sunil Mundra; Pål Axel Olsson; Mari Pent; Sergei Põlme; Shinichi Sunagawa; Martin Ryberg; Leho Tedersoo; Peer Bork
Journal:  Nature       Date:  2018-08-01       Impact factor: 49.962

6.  A test of the hierarchical model of litter decomposition.

Authors:  Mark A Bradford; G F Ciska Veen; Anne Bonis; Ella M Bradford; Aimee T Classen; J Hans C Cornelissen; Thomas W Crowther; Jonathan R De Long; Gregoire T Freschet; Paul Kardol; Marta Manrubia-Freixa; Daniel S Maynard; Gregory S Newman; Richard S P Logtestijn; Maria Viketoft; David A Wardle; William R Wieder; Stephen A Wood; Wim H van der Putten
Journal:  Nat Ecol Evol       Date:  2017-11-13       Impact factor: 15.460

7.  A global atlas of the dominant bacteria found in soil.

Authors:  Manuel Delgado-Baquerizo; Angela M Oliverio; Tess E Brewer; Alberto Benavent-González; David J Eldridge; Richard D Bardgett; Fernando T Maestre; Brajesh K Singh; Noah Fierer
Journal:  Science       Date:  2018-01-19       Impact factor: 47.728

8.  Global gaps in soil biodiversity data.

Authors:  Erin K Cameron; Inês S Martins; Patrick Lavelle; Jérôme Mathieu; Leho Tedersoo; Felix Gottschall; Carlos A Guerra; Jes Hines; Guillaume Patoine; Julia Siebert; Marten Winter; Simone Cesarz; Manuel Delgado-Baquerizo; Olga Ferlian; Noah Fierer; Holger Kreft; Thomas E Lovejoy; Luca Montanarella; Alberto Orgiazzi; Henrique M Pereira; Helen R P Phillips; Josef Settele; Diana H Wall; Nico Eisenhauer
Journal:  Nat Ecol Evol       Date:  2018-07       Impact factor: 15.460

9.  A communal catalogue reveals Earth's multiscale microbial diversity.

Authors:  Luke R Thompson; Jon G Sanders; Daniel McDonald; Amnon Amir; Joshua Ladau; Kenneth J Locey; Robert J Prill; Anupriya Tripathi; Sean M Gibbons; Gail Ackermann; Jose A Navas-Molina; Stefan Janssen; Evguenia Kopylova; Yoshiki Vázquez-Baeza; Antonio González; James T Morton; Siavash Mirarab; Zhenjiang Zech Xu; Lingjing Jiang; Mohamed F Haroon; Jad Kanbar; Qiyun Zhu; Se Jin Song; Tomasz Kosciolek; Nicholas A Bokulich; Joshua Lefler; Colin J Brislawn; Gregory Humphrey; Sarah M Owens; Jarrad Hampton-Marcell; Donna Berg-Lyons; Valerie McKenzie; Noah Fierer; Jed A Fuhrman; Aaron Clauset; Rick L Stevens; Ashley Shade; Katherine S Pollard; Kelly D Goodwin; Janet K Jansson; Jack A Gilbert; Rob Knight
Journal:  Nature       Date:  2017-11-01       Impact factor: 49.962

10.  Global patterns in bacterial diversity.

Authors:  Catherine A Lozupone; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-25       Impact factor: 11.205

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  72 in total

1.  Testing soil nematode extraction efficiency using different variations of the Baermann-funnel method.

Authors:  Simone Cesarz; Annika Eva Schulz; Rémy Beugnon; Nico Eisenhauer
Journal:  Soil Org       Date:  2019-08-06

2.  Natural diversity in the predatory behavior facilitates the establishment of a robust model strain for nematode-trapping fungi.

Authors:  Ching-Ting Yang; Guillermo Vidal-Diez de Ulzurrun; A Pedro Gonçalves; Hung-Che Lin; Ching-Wen Chang; Tsung-Yu Huang; Sheng-An Chen; Cheng-Kuo Lai; Isheng J Tsai; Frank C Schroeder; Jason E Stajich; Yen-Ping Hsueh
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-11       Impact factor: 11.205

3.  Putting soil invertebrate diversity on the map.

Authors:  Helen R P Phillips; Anna Heintz-Buschart; Nico Eisenhauer
Journal:  Mol Ecol       Date:  2020-02-20       Impact factor: 6.185

4.  The global distribution and environmental drivers of aboveground versus belowground plant biomass.

Authors:  Haozhi Ma; Lidong Mo; Thomas W Crowther; Daniel S Maynard; Johan van den Hoogen; Benjamin D Stocker; César Terrer; Constantin M Zohner
Journal:  Nat Ecol Evol       Date:  2021-06-24       Impact factor: 15.460

5.  Global distribution of earthworm diversity.

Authors:  Helen R P Phillips; Carlos A Guerra; Marie L C Bartz; Maria J I Briones; George Brown; Thomas W Crowther; Olga Ferlian; Konstantin B Gongalsky; Johan van den Hoogen; Julia Krebs; Alberto Orgiazzi; Devin Routh; Benjamin Schwarz; Elizabeth M Bach; Joanne Bennett; Ulrich Brose; Thibaud Decaëns; Birgitta König-Ries; Michel Loreau; Jérôme Mathieu; Christian Mulder; Wim H van der Putten; Kelly S Ramirez; Matthias C Rillig; David Russell; Michiel Rutgers; Madhav P Thakur; Franciska T de Vries; Diana H Wall; David A Wardle; Miwa Arai; Fredrick O Ayuke; Geoff H Baker; Robin Beauséjour; José C Bedano; Klaus Birkhofer; Eric Blanchart; Bernd Blossey; Thomas Bolger; Robert L Bradley; Mac A Callaham; Yvan Capowiez; Mark E Caulfield; Amy Choi; Felicity V Crotty; Andrea Dávalos; Darío J Diaz Cosin; Anahí Dominguez; Andrés Esteban Duhour; Nick van Eekeren; Christoph Emmerling; Liliana B Falco; Rosa Fernández; Steven J Fonte; Carlos Fragoso; André L C Franco; Martine Fugère; Abegail T Fusilero; Shaieste Gholami; Michael J Gundale; Mónica Gutiérrez López; Davorka K Hackenberger; Luis M Hernández; Takuo Hishi; Andrew R Holdsworth; Martin Holmstrup; Kristine N Hopfensperger; Esperanza Huerta Lwanga; Veikko Huhta; Tunsisa T Hurisso; Basil V Iannone; Madalina Iordache; Monika Joschko; Nobuhiro Kaneko; Radoslava Kanianska; Aidan M Keith; Courtland A Kelly; Maria L Kernecker; Jonatan Klaminder; Armand W Koné; Yahya Kooch; Sanna T Kukkonen; H Lalthanzara; Daniel R Lammel; Iurii M Lebedev; Yiqing Li; Juan B Jesus Lidon; Noa K Lincoln; Scott R Loss; Raphael Marichal; Radim Matula; Jan Hendrik Moos; Gerardo Moreno; Alejandro Morón-Ríos; Bart Muys; Johan Neirynck; Lindsey Norgrove; Marta Novo; Visa Nuutinen; Victoria Nuzzo; Mujeeb Rahman P; Johan Pansu; Shishir Paudel; Guénola Pérès; Lorenzo Pérez-Camacho; Raúl Piñeiro; Jean-François Ponge; Muhammad Imtiaz Rashid; Salvador Rebollo; Javier Rodeiro-Iglesias; Miguel Á Rodríguez; Alexander M Roth; Guillaume X Rousseau; Anna Rozen; Ehsan Sayad; Loes van Schaik; Bryant C Scharenbroch; Michael Schirrmann; Olaf Schmidt; Boris Schröder; Julia Seeber; Maxim P Shashkov; Jaswinder Singh; Sandy M Smith; Michael Steinwandter; José A Talavera; Dolores Trigo; Jiro Tsukamoto; Anne W de Valença; Steven J Vanek; Iñigo Virto; Adrian A Wackett; Matthew W Warren; Nathaniel H Wehr; Joann K Whalen; Michael B Wironen; Volkmar Wolters; Irina V Zenkova; Weixin Zhang; Erin K Cameron; Nico Eisenhauer
Journal:  Science       Date:  2019-10-25       Impact factor: 47.728

6.  The ecologist who wants to map everything.

Authors:  Aisling Irwin
Journal:  Nature       Date:  2019-09       Impact factor: 49.962

Review 7.  Soil Microbial Biogeography in a Changing World: Recent Advances and Future Perspectives.

Authors:  Haiyan Chu; Gui-Feng Gao; Yuying Ma; Kunkun Fan; Manuel Delgado-Baquerizo
Journal:  mSystems       Date:  2020-04-21       Impact factor: 6.496

8.  Building a global database of soil microbial biomass and function: a call for collaboration.

Authors:  Gabriel R Smith; Thomas W Crowther; Nico Eisenhauer; Johan van den Hoogen
Journal:  Soil Org       Date:  2020-07-01

9.  Sensory cilia as the Achilles heel of nematodes when attacked by carnivorous mushrooms.

Authors:  Ching-Han Lee; Han-Wen Chang; Ching-Ting Yang; Niaz Wali; Jiun-Jie Shie; Yen-Ping Hsueh
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-02       Impact factor: 11.205

10.  Lessons from the WBF2020: extrinsic and intrinsic value of soil organisms.

Authors:  Helen R P Phillips; Léa Beaumelle; Nico Eisenhauer; Jes Hines; Linnea C Smith
Journal:  Soil Org       Date:  2020-08-01
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