Literature DB >> 32317392

Soil Microbial Biogeography in a Changing World: Recent Advances and Future Perspectives.

Haiyan Chu1,2, Gui-Feng Gao3, Yuying Ma3, Kunkun Fan3,2, Manuel Delgado-Baquerizo4.   

Abstract

Soil microbial communities are fundamental to maintaining key soil processes associated with litter decomposition, nutrient cycling, and plant productivity and are thus integral to human well-being. Recent technological advances have exponentially increased our knowledge concerning the global ecological distributions of microbial communities across space and time and have provided evidence for their contribution to ecosystem functions. However, major knowledge gaps in soil biogeography remain to be addressed over the coming years as technology and research questions continue to evolve. In this minireview, we state recent advances and future directions in the study of soil microbial biogeography and discuss the need for a clearer concept of microbial species, projections of soil microbial distributions toward future global change scenarios, and the importance of embracing culture and isolation approaches to determine microbial functional profiles. This knowledge will be critical to better predict ecosystem functions in a changing world.
Copyright © 2020 Chu et al.

Entities:  

Keywords:  future perspectives; recent advances; soil microbial biogeography

Year:  2020        PMID: 32317392      PMCID: PMC7174637          DOI: 10.1128/mSystems.00803-19

Source DB:  PubMed          Journal:  mSystems        ISSN: 2379-5077            Impact factor:   6.496


  96 in total

1.  Microbes do not follow the elevational diversity patterns of plants and animals.

Authors:  Noah Fierer; Christy M McCain; Patrick Meir; Michael Zimmermann; Joshua M Rapp; Miles R Silman; Rob Knight
Journal:  Ecology       Date:  2011-04       Impact factor: 5.499

2.  Identifying the microbial taxa that consistently respond to soil warming across time and space.

Authors:  Angela M Oliverio; Mark A Bradford; Noah Fierer
Journal:  Glob Chang Biol       Date:  2016-11-28       Impact factor: 10.863

3.  Soil fungal diversity in natural grasslands of the Tibetan Plateau: associations with plant diversity and productivity.

Authors:  Teng Yang; Jonathan M Adams; Yu Shi; Jin-Sheng He; Xin Jing; Litong Chen; Leho Tedersoo; Haiyan Chu
Journal:  New Phytol       Date:  2017-05-22       Impact factor: 10.151

4.  Priming effect and microbial diversity in ecosystem functioning and response to global change: a modeling approach using the SYMPHONY model.

Authors:  Nazia Perveen; Sébastien Barot; Gaël Alvarez; Katja Klumpp; Raphael Martin; Alain Rapaport; Damien Herfurth; Frédérique Louault; Sébastien Fontaine
Journal:  Glob Chang Biol       Date:  2014-02-07       Impact factor: 10.863

5.  Drought consistently alters the composition of soil fungal and bacterial communities in grasslands from two continents.

Authors:  Raúl Ochoa-Hueso; Scott L Collins; Manuel Delgado-Baquerizo; Kelly Hamonts; William T Pockman; Robert L Sinsabaugh; Melinda D Smith; Alan K Knapp; Sally A Power
Journal:  Glob Chang Biol       Date:  2018-03-26       Impact factor: 10.863

6.  Ecological drivers of soil microbial diversity and soil biological networks in the Southern Hemisphere.

Authors:  Manuel Delgado-Baquerizo; Frank Reith; Paul G Dennis; Kelly Hamonts; Jeff R Powell; Andrew Young; Brajesh K Singh; Andrew Bissett
Journal:  Ecology       Date:  2018-02-12       Impact factor: 5.499

7.  Global-scale similarities in nitrogen release patterns during long-term decomposition.

Authors:  William Parton; Whendee L Silver; Ingrid C Burke; Leo Grassens; Mark E Harmon; William S Currie; Jennifer Y King; E Carol Adair; Leslie A Brandt; Stephen C Hart; Becky Fasth
Journal:  Science       Date:  2007-01-19       Impact factor: 47.728

8.  Global biogeography of highly diverse protistan communities in soil.

Authors:  Scott T Bates; Jose C Clemente; Gilberto E Flores; William Anthony Walters; Laura Wegener Parfrey; Rob Knight; Noah Fierer
Journal:  ISME J       Date:  2012-12-13       Impact factor: 10.302

9.  Microbial eukaryote plankton communities of high-mountain lakes from three continents exhibit strong biogeographic patterns.

Authors:  Sabine Filker; Ruben Sommaruga; Irma Vila; Thorsten Stoeck
Journal:  Mol Ecol       Date:  2016-05-14       Impact factor: 6.185

10.  Trophic network architecture of root-associated bacterial communities determines pathogen invasion and plant health.

Authors:  Zhong Wei; Tianjie Yang; Ville-Petri Friman; Yangchun Xu; Qirong Shen; Alexandre Jousset
Journal:  Nat Commun       Date:  2015-09-24       Impact factor: 14.919

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  8 in total

1.  Biogeographic Patterns and Elevational Differentiation of Sedimentary Bacterial Communities across River Systems in China.

Authors:  Sibo Zhang; Xinghui Xia; Junfeng Wang; Xiaokang Li; Yuan Xin; Jia'ao Bao; Lanfang Han; Wei Qin; Zhifeng Yang
Journal:  Appl Environ Microbiol       Date:  2022-05-31       Impact factor: 5.005

2.  The Distribution and Turnover of Bacterial Communities in the Root Zone of Seven Stipa Species Across an Arid and Semi-arid Steppe.

Authors:  Xiaodan Ma; Lumeng Chao; Jingpeng Li; Zhiying Ding; Siyu Wang; Fansheng Li; Yuying Bao
Journal:  Front Microbiol       Date:  2021-12-24       Impact factor: 5.640

3.  USCγ Dominated Community Composition and Cooccurrence Network of Methanotrophs and Bacteria in Subterranean Karst Caves.

Authors:  Xiao-Yu Cheng; Xiao-Yan Liu; Hong-Mei Wang; Chun-Tian Su; Rui Zhao; Paul L E Bodelier; Wei-Qi Wang; Li-Yuan Ma; Xiao-Lu Lu
Journal:  Microbiol Spectr       Date:  2021-08-18

4.  Drivers and trends of global soil microbial carbon over two decades.

Authors:  Guillaume Patoine; Nico Eisenhauer; Simone Cesarz; Helen R P Phillips; Xiaofeng Xu; Lihua Zhang; Carlos A Guerra
Journal:  Nat Commun       Date:  2022-07-20       Impact factor: 17.694

5.  Biogeographical survey of soil microbiomes across sub-Saharan Africa: structure, drivers, and predicted climate-driven changes.

Authors:  D A Cowan; P H Lebre; Cer Amon; R W Becker; H I Boga; A Boulangé; T L Chiyaka; T Coetzee; P C de Jager; O Dikinya; F Eckardt; M Greve; M A Harris; D W Hopkins; H B Houngnandan; P Houngnandan; K Jordaan; E Kaimoyo; A K Kambura; G Kamgan-Nkuekam; T P Makhalanyane; G Maggs-Kölling; E Marais; H Mondlane; E Nghalipo; B W Olivier; M Ortiz; L R Pertierra; J-B Ramond; M Seely; I Sithole-Niang; A Valverde; G Varliero; S Vikram; D H Wall; A Zeze
Journal:  Microbiome       Date:  2022-08-23       Impact factor: 16.837

6.  Source and acquisition of rhizosphere microbes in Antarctic vascular plants.

Authors:  Sergio Guajardo-Leiva; Jaime Alarcón; Florence Gutzwiller; Jorge Gallardo-Cerda; Ian S Acuña-Rodríguez; Marco Molina-Montenegro; Keith A Crandall; Marcos Pérez-Losada; Eduardo Castro-Nallar
Journal:  Front Microbiol       Date:  2022-09-08       Impact factor: 6.064

7.  Soil microbial communities in the face of changing farming practices: A case study in an agricultural landscape in France.

Authors:  Laurie Dunn; Christophe Lang; Nicolas Marilleau; Sébastien Terrat; Luc Biju-Duval; Mélanie Lelièvre; Solène Perrin; Nicolas Chemidlin Prévost-Bouré
Journal:  PLoS One       Date:  2021-06-17       Impact factor: 3.240

Review 8.  The role of soils in provision of genetic, medicinal and biochemical resources.

Authors:  Sören Thiele-Bruhn
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-08-04       Impact factor: 6.671

  8 in total

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