| Literature DB >> 31272385 |
Qiu Qiu1,2, Yong-Jian Nian3, Yan Guo1, Liang Tang1, Nan Lu3, Liang-Zhi Wen1, Bin Wang1, Dong-Feng Chen4, Kai-Jun Liu5.
Abstract
BACKGROUND: Multiple organ failure (MOF) is a serious complication of moderately severe (MASP) and severe acute pancreatitis (SAP). This study aimed to develop and assess three machine-learning models to predict MOF.Entities:
Keywords: Machine learning; Multiple organ failure; Pancreatitis
Year: 2019 PMID: 31272385 PMCID: PMC6611034 DOI: 10.1186/s12876-019-1016-y
Source DB: PubMed Journal: BMC Gastroenterol ISSN: 1471-230X Impact factor: 3.067
Characteristic of patients in group with MOF and without MOF
| No MOF ( | MOF ( | Statistic | ||
|---|---|---|---|---|
| Male, no. (%) | 123 (64.40%) | 42 (58.33%) | 0.364 | |
| Median age, year | 47.00 (39.00–59.00) | 47.50 (39.00–58.75) | Z = − 0.266 | 0.791 |
| History of hypertension, no. (%) | 39 (20.42%) | 19 (26.39%) | 0.298 | |
| History of diabetes, no. (%) | 23 (12.04%) | 8 (11.11%) | 0.835 | |
| Etiology, no. (%) | 0.397 | |||
| Biliary | 75 (39.27%) | 31 (43.06%) | ||
| Hypertriglyceridemia | 66 (34.56%) | 26 (36.11%) | ||
| Alcoholic | 21 (10.99%) | 3 (4.17%) | ||
| Other | 29 (15.18%) | 12 (16.66%) | ||
| BMI, kg/m2 | 25.55 ± 3.89 | 25.82 ± 3.10 | t = − 0.591 | 0.555 |
| Obese (BMI ≥ 25 kg/m2), no. (%) | 105 (54.97%) | 42 (58.33%) | 0.625 | |
| Routine blood test | ||||
| WBC, × 109/L | 13.47 (8.95–17.29) | 12.97 (10.03–16.73) | Z = − 0.046 | 0.963 |
| NEUT, % | 86.00 (80.50–89.80) | 85.2 (79.55–89.88) | Z = − 0.357 | 0.721 |
| HCT, % | 37.00 (30.50–43.60) | 31.65 (25.05–43.73) | Z = −2.696 |
|
| PLT, × 109/L | 166.00 (124.00–227.00) | 145.50 (84.50–247.75) | Z = − 1.733 | 0.083 |
| MPV, fL | 12.40 (10.90–13.90) | 12.10 (10.93–13.80) | Z = −0.675 | 0.500 |
| PDW, % | 16.60 (12.80–20.07) | 16.75 (15.00–18.30) | Z = −0.414 | 0.679 |
| Coagulogram | ||||
| PT, seconds | 12.70 (11.80–13.70) | 14.35 (12.33–16.10) | Z = − 4.519 |
|
| APTT, seconds | 29.80 (27.10–33.00) | 37.40 (30.93–47.00) | Z = − 5.243 |
|
| TT, seconds | 14.90 (13.80–16.90) | 17.00 (15.33–21.35) | Z = − 4.748 |
|
| FIB, g/L | 4.60 (3.56–5.90) | 3.73 (2.58–4.64) | Z = − 4.191 |
|
| D-dimer, mg/L | 2450.00 (1010.00–4983.00) | 3219.00 (1371.88–5972.50) | Z = − 1.980 |
|
| TEG | ||||
| R-time, minutes | 5.60 (4.60–6.60) | 6.35 (4.80–8.78) | Z = − 3.014 |
|
| K-time, minutes | 1.40 (1.10–1.80) | 1.80 (1.30–2.90) | Z = − 4.316 |
|
| α, degrees | 70.10 (64.80–73.50) | 64.80 (53.90–72.60) | Z = − 3.901 |
|
| MA, mm | 68.90 (63.50–73.50) | 63.55 (54.85–70.68) | Z = − 3.609 |
|
| Ly30, % | 0 (0–0.30) | 0 (0–0) | Z = − 1.655 | 0.098 |
| CI | 1.90 (0.40–2.80) | − 0.05(− 3.83–2.38) | Z = − 4.403 |
|
| Inflammatory markers | ||||
| CRP, mg/L | 122.30 (31.30–200.00) | 175.65 (85.73–200.00) | Z = − 2.247 |
|
| IL-6, pg/ml | 33.00 (6.20–95.50,) | 99.95 (44.80–293.90) | Z = −5.612 |
|
| PCT, ng/ml | 0.80 (0.23–1.84) | 4.75 (0.60–19.44) | Z = − 5.591 |
|
| Renal function | ||||
| BUN, mmol/L | 5.20 (3.61–6.96) | 8.05 (5.27–16.40) | Z = −5.334 |
|
| Creatinine, μmol/L | 64.20 (51.00–85.30) | 119.35 (57.00–274.15) | Z = −4.793 |
|
| Ca2+, mmol/L | 1.98 (1.79–2.14) | 1.96 (1.72–2.16) | Z = − 0.335 | 0.737 |
| APACHE II score | 9.00 (7.00–11.00) | 14.00 (11.00–15.75) | Z = −7.879 |
|
Entries in boldface showed significant difference
Different combinations of features by SVM
| Combination of features | HCT | PT | APTT | TT | FIB | D-dimer | R-time | K-time | α | MA | CI | CRP | IL-6 | PCT | BUN | Creatinine | AUC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | √ | 0.7015 | |||||||||||||||
| 2 | √ | √ | 0.7690 | ||||||||||||||
| 3 | √ | √ | √ | 0.8006 | |||||||||||||
| 4 | √ | √ | √ | √ | 0.8130 | ||||||||||||
| 5 | √ | √ | √ | √ | √ | 0.8168 | |||||||||||
| 6 | √ | √ | √ | √ | √ | √ | 0.8278 | ||||||||||
| 7 | √ | √ | √ | √ | √ | √ | √ | 0.8362 | |||||||||
| 8 | √ | √ | √ | √ | √ | √ | √ | √ | 0.8378 | ||||||||
| 9 | √ | √ | √ | √ | √ | √ | √ | √ | √ |
| |||||||
| 10 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8370 | ||||||
| 11 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8382 | |||||
| 12 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8338 | ||||
| 13 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8332 | |||
| 14 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8301 | ||
| 15 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8250 | |
| 16 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8157 |
Entry in boldface showed highest AUC
Fig. 1The ROC curves of different models. a The ROC curves of different combinations of features from SVM for predicting MOF in MSAP and SAP. AUC of the optimal combination = 0.840 (95% CI: 0.783–0.896); AUC of single feature (BUN) = 0.702 (95% CI: 0.625–0.778); AUC of all features = 0.816 (95% CI: 0.755–0.876). b The ROC curves of different combinations of features from LRA for predicting MOF in MSAP and SAP. AUC of the optimal combination = 0.832 (95% CI: 0.773–0.890); AUC of single feature (IL-6) = 0.709 (95% CI: 0.642–0.775); AUC of all features = 0.783 (95% CI: 0.714–0.853). c The ROC curves of different combinations of features from ANN for predicting MOF in MSAP and SAP. AUC of the optimal combination = 0.834 (95% CI: 0.777–0.890); AUC of single feature (IL-6) = 0.705 (95% CI: 0.639–0.772); AUC of all features = 0.789 (95% CI: 0.723–0.856). d The ROC curves of three models and the APACHE II score for predicting MOF in MSAP and SAP. AUC of SVM = 0.840 (95% CI: 0.783–0.896); AUC of LRA = 0.832 (95% CI: 0.773–0.890); AUC of ANN = 0.834 (95% CI: 0.777–0.890); AUC of APACHE II score = 0.814 (95% CI: 0.759–0.869)
Different combinations of features by LRA
| Combination of features | HCT | PT | APTT | TT | FIB | D-dimer | R-time | K-time | α | MA | CI | CRP | IL-6 | PCT | BUN | Creatinine | AUC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | √ | 0.7088 | |||||||||||||||
| 2 | √ | √ | 0.7803 | ||||||||||||||
| 3 | √ | √ | √ | 0.8101 | |||||||||||||
| 4 | √ | √ | √ | √ | 0.8226 | ||||||||||||
| 5 | √ | √ | √ | √ | √ | 0.8294 | |||||||||||
| 6 | √ | √ | √ | √ | √ | √ |
| ||||||||||
| 7 | √ | √ | √ | √ | √ | √ | √ | 0.8275 | |||||||||
| 8 | √ | √ | √ | √ | √ | √ | √ | √ | 0.8269 | ||||||||
| 9 | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8285 | |||||||
| 10 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8240 | ||||||
| 11 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8221 | |||||
| 12 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8147 | ||||
| 13 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8149 | |||
| 14 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8054 | ||
| 15 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8040 | |
| 16 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.7833 |
Entry in boldface showed highest AUC
Different combinations of features by ANN
| Combination of features | HCT | PT | APTT | TT | FIB | D-dimer | R-time | K-time | α | MA | CI | CRP | IL-6 | PCT | BUN | Creatinine | AUC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | √ | 0.7054 | |||||||||||||||
| 2 | √ | √ | 0.7771 | ||||||||||||||
| 3 | √ | √ | √ | 0.8077 | |||||||||||||
| 4 | √ | √ | √ | √ |
| ||||||||||||
| 5 | √ | √ | √ | √ | √ | 0.8257 | |||||||||||
| 6 | √ | √ | √ | √ | √ | √ | 0.8280 | ||||||||||
| 7 | √ | √ | √ | √ | √ | √ | √ | 0.8309 | |||||||||
| 8 | √ | √ | √ | √ | √ | √ | √ | √ | 0.8314 | ||||||||
| 9 | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8284 | |||||||
| 10 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8304 | ||||||
| 11 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8281 | |||||
| 12 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8236 | ||||
| 13 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8156 | |||
| 14 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.8138 | ||
| 15 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.7991 | |
| 16 | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | √ | 0.7894 |
Entry in boldface showed highest AUC
Comparison of SVM, LRA, ANN and APACHE II score for predicting MOF
| Variable | SVM (95% CI) | LRA (95% CI) | ANN (95% CI) | APACHE II score (95% CI) | P value |
|---|---|---|---|---|---|
| SEN | 75.00%(63.16–84.13%) | 79.17%(67.67–87.50%) | 86.11%(75.48–92.78%) | 80.56%(69.20–88.59%) | 0.413 |
| SPE | 81.68%(75.30–86.75%)b, c | 77.49%(70.78–83.07%) | 65.45%(58.19–72.07%)a | 65.45%(58.19–72.07%)a |
|
| FPR | 18.32%(12.84–23.81%)b, c | 22.51%(16.59–28.43%) | 34.55%(27.79–41.31%)a | 34.55%(27.79–41.31%)a |
|
| FNR | 25.00%(15.00–35.00%) | 20.83%(11.45–32.21%) | 13.89%(5.90–21.88%) | 19.44%(10.30–28.58%) | 0.413 |
| PPV | 60.67%(49.72–70.69%)c | 57.00%(46.72–66.73%) | 48.44%(39.58–57.39%) | 46.77%(37.83–55.92%) | 0.129 |
| NPV | 89.66%(83.91–93.58%) | 90.80%(85.01–94.58%) | 92.59%(86.45–96.16%) | 89.93%(83.38–94.18%) | 0.827 |
| Accuracy | 79.85%(74.10–83.80%)b, c | 77.95%(72.94–82.96%) | 71.10%(65.62–76.58%) | 69.58%(64.02–75.14%)a |
|
| AUC | 0.840 (0.783–0.896) | 0.832 (0.773–0.890) | 0.834 (0.777–0.890) | 0.814 (0.759–0.869) | – |
aCompared with LRA, P < 0.05
bCompared with ANN, P < 0.05
cCompared with APACHE II score, P < 0.05
P value denoted the overall statistical result for the three models and APACHE II score
Entries in boldface showed significant difference