| Literature DB >> 35653504 |
Balázs Kui1,2, József Pintér3, Roland Molontay3,4, Marcell Nagy3, Nelli Farkas5,6, Noémi Gede5, Áron Vincze7, Judit Bajor7, Szilárd Gódi7, József Czimmer7, Imre Szabó7, Anita Illés7, Patrícia Sarlós7, Roland Hágendorn7, Gabriella Pár7, Mária Papp8, Zsuzsanna Vitális8, György Kovács8, Eszter Fehér8, Ildikó Földi8, Ferenc Izbéki9, László Gajdán9, Roland Fejes9, Balázs Csaba Németh1,2, Imola Török10, Hunor Farkas10, Artautas Mickevicius11, Ville Sallinen12, Shamil Galeev13, Elena Ramírez-Maldonado14, Andrea Párniczky5,15, Bálint Erőss5,16,17, Péter Jenő Hegyi5,16, Katalin Márta16,17, Szilárd Váncsa5,16,17, Robert Sutton18, Peter Szatmary18, Diane Latawiec18, Chris Halloran18, Enrique de-Madaria19, Elizabeth Pando20, Piero Alberti20, Maria José Gómez-Jurado20, Alina Tantau21,22, Andrea Szentesi2,5, Péter Hegyi5,16,17.
Abstract
BACKGROUND: Acute pancreatitis (AP) is a potentially severe or even fatal inflammation of the pancreas. Early identification of patients at high risk for developing a severe course of the disease is crucial for preventing organ failure and death. Most of the former predictive scores require many parameters or at least 24 h to predict the severity; therefore, the early therapeutic window is often missed.Entities:
Keywords: acute pancreatitis; artificial intelligence; severity prediction
Mesh:
Year: 2022 PMID: 35653504 PMCID: PMC9162438 DOI: 10.1002/ctm2.842
Source DB: PubMed Journal: Clin Transl Med ISSN: 2001-1326
FIGURE 1The workflow of the development of the prediction model
Characteristics of the original cohort
| Data quality | |||
|---|---|---|---|
| Demographic data | |||
| Gender, male% | 58.1% | Female/male | 100% |
| Age, mean (SD); min, max | 55.7 (16.6) | [17, 95] | 100% |
| BMI, mean (SD); min, max | 27.98 (5.86) | [14.8, 50.4] | 99% |
| Anamnestic data | |||
| Alcohol consumption, yes% | 54.0% | Yes/no | 100% |
| Smoking, yes% | 34.4% | Yes/no | 100% |
| Length of abdominal pain, mean (SD) in hours; min, max | 36.8 (40.4) | [1, 168] | 98% |
| Admission data | |||
| Abdominal guarding, yes% | 22.7% | Yes/no | 99% |
| Abdominal tenderness, yes% | 89.6% | Yes/no | 99% |
| Body temperature (axillary),°C mean (SD); min, max | 36.7 (0.46) | [34.8, 39.0] | 98% |
| Systolic blood pressure (Hgmm), mean (SD); min, max | 141.9 (22.5) | [75, 220] | 100% |
| Diastolic blood pressure (Hgmm), mean (SD); min, max | 85.2 (14.3) | [40, 191] | 100% |
| Heart rate, mean (SD); min, max | 83.9 (16.5) | [41, 153] | 100% |
| Respiratory rate, mean (SD); min, max | 17.7 (3.7) | [10, 45] | 99% |
| Laboratory parameters | |||
| Amylase (U/L), mean (SD); min, max | 1077 (1117) | [16, 8544] | 100% |
| Aspartate transaminase (U/L), mean (SD); min, max | 147.9 (186) | [4, 1251] | 99% |
| Serum ionized Calcium (mmol/L), mean (SD); min, max | 2.31 (0.22) | [1.5, 4.5] | 98% |
| C‐reactive protein (mg/L), mean (SD); min, max | 49.76 (74.5) | [0.07, 515] | 100% |
| Creatinine (μmol/L), mean (SD); min, max | 85.8 (46.7) | [36, 706] | 100% |
| Glucose (mmol/L), mean (SD); min, max | 8.23 (3.48) | [2.53, 43.29] | 100% |
| Potassium (mmol/L), mean (SD); min, max | 4.12 (0.55) | [2.5, 7] | 97% |
| Sodium (mmol/L), mean (SD); min, max | 137.8 (4.1) | [116, 155] | 97% |
| Urea (carbamide) (mmol/L), mean (SD); min, max | 6.32 (3.85) | [0.98, 40.09] | 100% |
| White blood cell count (G/L), mean (SD); min, max | 12.78 (5.05) | [1.32, 52.70] | 100% |
| Imaging examinations | |||
| Pleural fluid | 12.0% | Yes/no | 88% |
| Acute peripancreatic fluid collection | 22.2% | Yes/no | 93% |
| Abdominal fluid | 23.0% | Yes/no | 96% |
| Outcome | |||
| The severity of acute pancreatitis, severe% | 5.9% | Non‐severe/severe | 100% |
Abbreviations: BMI, body mass index; SD, standard deviation.
Data not missing.
FIGURE 2The cross‐validated (fold = 4) receiver operating characteristic (ROC) curve of the XGBoost model. The corresponding mean area under the curve (AUC) is 0.809. The 95% confidence interval is [0.776, 0.842]
FIGURE 3The performance of the XGBoost model trained on different sized sets. The points show the area under the curve (AUC) scores, and the bars are the corresponding confidence intervals
FIGURE 4The performance of the model using varying numbers of attributes with the top k most important features. The importance is calculated using the SHapley Additive exPlanations (SHAP) importance. The points show the area under the curve (AUC) scores, and the bars are the corresponding confidence intervals
FIGURE 5The predicted severity score on a selected subset of the dataset and the confidence intervals for the 10th and 90th percentiles and the 25th and 75th percentiles. The records are sorted by the severity score
FIGURE 6A summary plot of the impact of the features on the prediction (severity score) of the model. Each patient is represented by a point in each row. The colour of the points represents the relative value of the feature, and the x‐position of the points is the SHapley Additive exPlanations (SHAP) value, that is, the impact on the model's prediction
FIGURE 7Three examples of the local explanation of the predictions using the SHapley Additive exPlanations (SHAP) values. (A) Predicted mild acute pancreatitis (AP). (B) Predicted AP with borderline severity. (C) Predicted severe AP. Factors that push the predicted score higher compared to the base value (mean prediction) are coloured orange, and those pushing lower the prediction are shown in green
FIGURE 8An example output of the web application for the following input parameters—age: 55 years, gender: 0 (woman), body mass index: 22, alcohol consumption: 1 (true), blood pressure/pulse: 140/75/60, body temperature: 37.0°C, respiratory rate: 25. (A) Predicted severity score. (B) Explanation of prediction. (C) The kernel density estimate plot of the distribution of the predictions