Literature DB >> 31091516

Beltrami-net: domain-independent deep D-bar learning for absolute imaging with electrical impedance tomography (a-EIT).

S J Hamilton1, A Hänninen, A Hauptmann, V Kolehmainen.   

Abstract

OBJECTIVE: To develop, and demonstrate the feasibility of, a novel image reconstruction method for absolute electrical impedance tomography (a-EIT) that pairs deep learning techniques with real-time robust D-bar methods and examine the influence of prior information on the reconstruction. APPROACH: A D-bar method is paired with a trained convolutional neural network (CNN) as a post-processing step. Training data is simulated for the network using no knowledge of the boundary shape by using an associated nonphysical Beltrami equation rather than simulating the traditional current and voltage data specific to a given domain. This allows the training data to be boundary shape independent. The method is tested on experimental data from two EIT systems (ACT4 and KIT4) with separate training sets of varying prior information. MAIN
RESULTS: Post-processing the D-bar images with a CNN produces significant improvements in image quality measured by structural SIMilarity indices (SSIMs) as well as relative [Formula: see text] and [Formula: see text] image errors. SIGNIFICANCE: This work demonstrates that more general networks can be trained without being specific about boundary shape, a key challenge in EIT image reconstruction. The work is promising for future studies involving databases of anatomical atlases.

Entities:  

Mesh:

Year:  2019        PMID: 31091516      PMCID: PMC6816539          DOI: 10.1088/1361-6579/ab21b2

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.833


  18 in total

1.  A direct reconstruction algorithm for electrical impedance tomography.

Authors:  Jennifer L Mueller; Samuli Siltanen; David Isaacson
Journal:  IEEE Trans Med Imaging       Date:  2002-06       Impact factor: 10.048

2.  Generation of anisotropic-smoothness regularization filters for EIT.

Authors:  Andrea Borsic; William R B Lionheart; Christopher N McLeod
Journal:  IEEE Trans Med Imaging       Date:  2002-06       Impact factor: 10.048

3.  Reconstructions of chest phantoms by the D-bar method for electrical impedance tomography.

Authors:  David Isaacson; Jennifer L Mueller; Jonathan C Newell; Samuli Siltanen
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

4.  Effect of domain shape modeling and measurement errors on the 2-D D-bar method for EIT.

Authors:  Ethan K Murphy; Jennifer L Mueller
Journal:  IEEE Trans Med Imaging       Date:  2009-05-12       Impact factor: 10.048

5.  Deep Convolutional Neural Network for Inverse Problems in Imaging.

Authors:  Michael T McCann; Emmanuel Froustey; Michael Unser
Journal:  IEEE Trans Image Process       Date:  2017-06-15       Impact factor: 10.856

6.  Deep D-Bar: Real-Time Electrical Impedance Tomography Imaging With Deep Neural Networks.

Authors:  Sarah Jane Hamilton; A Hauptmann
Journal:  IEEE Trans Med Imaging       Date:  2018-04-27       Impact factor: 10.048

7.  Image reconstruction by domain-transform manifold learning.

Authors:  Bo Zhu; Jeremiah Z Liu; Stephen F Cauley; Bruce R Rosen; Matthew S Rosen
Journal:  Nature       Date:  2018-03-21       Impact factor: 49.962

8.  DYNAMIC OPTIMIZED PRIORS FOR D-BAR RECONSTRUCTIONS OF HUMAN VENTILATION USING ELECTRICAL IMPEDANCE TOMOGRAPHY.

Authors:  Melody Alsaker; Jennifer L Mueller; Rashmi Murthy
Journal:  J Comput Appl Math       Date:  2018-08-13       Impact factor: 2.621

9.  Learning a variational network for reconstruction of accelerated MRI data.

Authors:  Kerstin Hammernik; Teresa Klatzer; Erich Kobler; Michael P Recht; Daniel K Sodickson; Thomas Pock; Florian Knoll
Journal:  Magn Reson Med       Date:  2017-11-08       Impact factor: 4.668

10.  A Post-Processing Method for Three-Dimensional Electrical Impedance Tomography.

Authors:  Sébastien Martin; Charles T M Choi
Journal:  Sci Rep       Date:  2017-08-03       Impact factor: 4.379

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  7 in total

1.  The D-bar method for electrical impedance tomography-demystified.

Authors:  J L Mueller; S Siltanen
Journal:  Inverse Probl       Date:  2020-08-31       Impact factor: 2.407

2.  Graph Convolutional Networks for Model-Based Learning in Nonlinear Inverse Problems.

Authors:  William Herzberg; Daniel B Rowe; Andreas Hauptmann; Sarah J Hamilton
Journal:  IEEE Trans Comput Imaging       Date:  2021-12-02

3.  Multi-Scale Learned Iterative Reconstruction.

Authors:  Andreas Hauptmann; Jonas Adler; Simon Arridge; Ozan Öktem
Journal:  IEEE Trans Comput Imaging       Date:  2020-04-27

4.  Electrical Impedance Tomography-Based Abdominal Subcutaneous Fat Estimation Method Using Deep Learning.

Authors:  Kyounghun Lee; Minha Yoo; Ariungerel Jargal; Hyeuknam Kwon
Journal:  Comput Math Methods Med       Date:  2020-06-11       Impact factor: 2.238

Review 5.  Robust imaging using electrical impedance tomography: review of current tools.

Authors:  Benoit Brazey; Yassine Haddab; Nabil Zemiti
Journal:  Proc Math Phys Eng Sci       Date:  2022-02-02       Impact factor: 2.704

6.  Improved resolution of D-bar images of ventilation using a Schur complement property and an anatomical atlas.

Authors:  Talles Batista Rattis Santos; Rafael Mikio Nakanishi; Erick Dario León Bueno de Camargo; Marcelo Brito Passos Amato; Jari P Kaipio; Raul Gonzalez Lima; Jennifer L Mueller
Journal:  Med Phys       Date:  2022-05-05       Impact factor: 4.506

7.  Introduction of Sample Based Prior into the D-Bar Method Through a Schur Complement Property.

Authors:  Talles Batista Rattis Santos; Rafael Mikio Nakanishi; Jari P Kaipio; Jennifer L Mueller; Raul Gonzalez Lima
Journal:  IEEE Trans Med Imaging       Date:  2020-11-30       Impact factor: 11.037

  7 in total

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