Literature DB >> 31048770

RNA modifications regulating cell fate in cancer.

Sylvain Delaunay1,2, Michaela Frye3,4.   

Abstract

The deposition of chemical modifications into RNA is a crucial regulator of temporal and spatial gene expression programs during development. Accordingly, altered RNA modification patterns are widely linked to developmental diseases. Recently, the dysregulation of RNA modification pathways also emerged as a contributor to cancer. By modulating cell survival, differentiation, migration and drug resistance, RNA modifications add another regulatory layer of complexity to most aspects of tumourigenesis.

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Year:  2019        PMID： 31048770     DOI： 10.1038/s41556-019-0319-0

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN： 1465-7392            Impact factor:   28.824


  129 in total

Review 1.  Detecting RNA modifications in the epitranscriptome: predict and validate.

Authors:  Mark Helm; Yuri Motorin
Journal:  Nat Rev Genet       Date:  2017-02-20       Impact factor: 53.242

2.  Visualization of chemical modifications in the human 80S ribosome structure.

Authors:  S Kundhavai Natchiar; Alexander G Myasnikov; Hanna Kratzat; Isabelle Hazemann; Bruno P Klaholz
Journal:  Nature       Date:  2017-11-15       Impact factor: 49.962

Review 3.  Transfer RNA: molecular structure, sequence, and properties.

Authors:  A Rich; U L RajBhandary
Journal:  Annu Rev Biochem       Date:  1976       Impact factor: 23.643

4.  The dynamic N(1)-methyladenosine methylome in eukaryotic messenger RNA.

Authors:  Dan Dominissini; Sigrid Nachtergaele; Sharon Moshitch-Moshkovitz; Eyal Peer; Nitzan Kol; Moshe Shay Ben-Haim; Qing Dai; Ayelet Di Segni; Mali Salmon-Divon; Wesley C Clark; Guanqun Zheng; Tao Pan; Oz Solomon; Eran Eyal; Vera Hershkovitz; Dali Han; Louis C Doré; Ninette Amariglio; Gideon Rechavi; Chuan He
Journal:  Nature       Date:  2016-02-10       Impact factor: 49.962

Review 5.  RNA modifications: what have we learned and where are we headed?

Authors:  Michaela Frye; Samie R Jaffrey; Tao Pan; Gideon Rechavi; Tsutomu Suzuki
Journal:  Nat Rev Genet       Date:  2016-05-03       Impact factor: 53.242

6.  Stem cell function and stress response are controlled by protein synthesis.

Authors:  Sandra Blanco; Roberto Bandiera; Martyna Popis; Shobbir Hussain; Patrick Lombard; Jelena Aleksic; Abdulrahim Sajini; Hinal Tanna; Rosana Cortés-Garrido; Nikoletta Gkatza; Sabine Dietmann; Michaela Frye
Journal:  Nature       Date:  2016-06-16       Impact factor: 49.962

Review 7.  Modifications and functional genomics of human transfer RNA.

Authors:  Tao Pan
Journal:  Cell Res       Date:  2018-02-20       Impact factor: 25.617

Review 8.  Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.

Authors:  Katherine E Sloan; Ahmed S Warda; Sunny Sharma; Karl-Dieter Entian; Denis L J Lafontaine; Markus T Bohnsack
Journal:  RNA Biol       Date:  2016-12-02       Impact factor: 4.652

9.  MODOMICS: a database of RNA modification pathways. 2017 update.

Authors:  Pietro Boccaletto; Magdalena A Machnicka; Elzbieta Purta; Pawel Piatkowski; Blazej Baginski; Tomasz K Wirecki; Valérie de Crécy-Lagard; Robert Ross; Patrick A Limbach; Annika Kotter; Mark Helm; Janusz M Bujnicki
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

10.  Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.

Authors:  Dan Dominissini; Sharon Moshitch-Moshkovitz; Schraga Schwartz; Mali Salmon-Divon; Lior Ungar; Sivan Osenberg; Karen Cesarkas; Jasmine Jacob-Hirsch; Ninette Amariglio; Martin Kupiec; Rotem Sorek; Gideon Rechavi
Journal:  Nature       Date:  2012-04-29       Impact factor: 49.962
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  88 in total

Review 1.  Pseudouridine as a novel biomarker in prostate cancer.

Authors:  Jennifer A Stockert; Rachel Weil; Kamlesh K Yadav; Natasha Kyprianou; Ashutosh K Tewari
Journal:  Urol Oncol       Date:  2020-07-22       Impact factor: 3.498

2.  Genetic variants in m6A regulators are associated with gastric cancer risk.

Authors:  Xiaowei Wang; Dan Guan; Dafei Wang; Hanting Liu; Yanling Wu; Weida Gong; Mulong Du; Haiyan Chu; Jing Qian; Zhengdong Zhang
Journal:  Arch Toxicol       Date:  2021-01-04       Impact factor: 5.153

Review 3.  The Biogenesis and Precise Control of RNA m6A Methylation.

Authors:  Huilin Huang; Hengyou Weng; Jianjun Chen
Journal:  Trends Genet       Date:  2019-12-04       Impact factor: 11.639

4.  RNA modifications and cancer.

Authors:  Phensinee Haruehanroengra; Ya Ying Zheng; Yubin Zhou; Yun Huang; Jia Sheng
Journal:  RNA Biol       Date:  2020-02-07       Impact factor: 4.652

5.  Gene signatures of m5C regulators may predict prognoses of patients with head and neck squamous cell carcinoma.

Authors:  Miaomiao Xue; Qingmiao Shi; Lian Zheng; Qingbin Li; Liya Yang; Yuanyuan Zhang
Journal:  Am J Transl Res       Date:  2020-10-15       Impact factor: 4.060

6.  m6A RNA methylation impacts fate choices during skin morphogenesis.

Authors:  Thomas Carroll; Irina Matos; Linghe Xi; Ji-Dung Luo; Lisa Polak; H Amalia Pasolli; Samie R Jaffrey; Elaine Fuchs
Journal:  Elife       Date:  2020-08-26       Impact factor: 8.140

Review 7.  The expanding world of tRNA modifications and their disease relevance.

Authors:  Tsutomu Suzuki
Journal:  Nat Rev Mol Cell Biol       Date:  2021-03-03       Impact factor: 94.444

8.  Quantitative profiling of pseudouridylation dynamics in native RNAs with nanopore sequencing.

Authors:  Oguzhan Begik; Morghan C Lucas; Leszek P Pryszcz; Jose Miguel Ramirez; Rebeca Medina; Ivan Milenkovic; Sonia Cruciani; Huanle Liu; Helaine Graziele Santos Vieira; Aldema Sas-Chen; John S Mattick; Schraga Schwartz; Eva Maria Novoa
Journal:  Nat Biotechnol       Date:  2021-05-13       Impact factor: 54.908

Review 9.  The many ways Epstein-Barr virus takes advantage of the RNA tool kit.

Authors:  Nara Lee
Journal:  RNA Biol       Date:  2021-01-30       Impact factor: 4.652

10.  Sequence- and structure-specific cytosine-5 mRNA methylation by NSUN6.

Authors:  Tommaso Selmi; Shobbir Hussain; Sabine Dietmann; Matthias Heiß; Kayla Borland; Sophia Flad; Jean-Michel Carter; Rebecca Dennison; Ya-Lin Huang; Stefanie Kellner; Susanne Bornelöv; Michaela Frye
Journal:  Nucleic Acids Res       Date:  2021-01-25       Impact factor: 16.971
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