Literature DB >> 33658722

The expanding world of tRNA modifications and their disease relevance.

Tsutomu Suzuki1.   

Abstract

Transfer RNA (tRNA) is an adapter molecule that links a specific codon in mRNA with its corresponding amino acid during protein synthesis. tRNAs are enzymatically modified post-transcriptionally. A wide variety of tRNA modifications are found in the tRNA anticodon, which are crucial for precise codon recognition and reading frame maintenance, thereby ensuring accurate and efficient protein synthesis. In addition, tRNA-body regions are also frequently modified and thus stabilized in the cell. Over the past two decades, 16 novel tRNA modifications were discovered in various organisms, and the chemical space of tRNA modification continues to expand. Recent studies have revealed that tRNA modifications can be dynamically altered in response to levels of cellular metabolites and environmental stresses. Importantly, we now understand that deficiencies in tRNA modification can have pathological consequences, which are termed 'RNA modopathies'. Dysregulation of tRNA modification is involved in mitochondrial diseases, neurological disorders and cancer.

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Year:  2021        PMID: 33658722     DOI: 10.1038/s41580-021-00342-0

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  239 in total

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Journal:  Biochemistry       Date:  2010-06-22       Impact factor: 3.162

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Journal:  Science       Date:  1989-05-26       Impact factor: 47.728

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Journal:  J Mol Biol       Date:  1966-08       Impact factor: 5.469

Review 6.  Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland.

Authors:  Mark Helm; Juan D Alfonzo
Journal:  Chem Biol       Date:  2013-12-05

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Journal:  Biochemistry       Date:  1993-04-20       Impact factor: 3.162

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Journal:  EMBO J       Date:  1997-03-03       Impact factor: 11.598

Review 9.  Celebrating wobble decoding: Half a century and still much is new.

Authors:  Paul F Agris; Emily R Eruysal; Amithi Narendran; Ville Y P Väre; Sweta Vangaveti; Srivathsan V Ranganathan
Journal:  RNA Biol       Date:  2017-09-21       Impact factor: 4.652

Review 10.  A rationale for tRNA modification circuits in the anticodon loop.

Authors:  Lu Han; Eric M Phizicky
Journal:  RNA       Date:  2018-07-19       Impact factor: 4.942

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  50 in total

Review 1.  tRNA modification dynamics from individual organisms to metaepitranscriptomics of microbiomes.

Authors:  Wen Zhang; Marcus Foo; A Murat Eren; Tao Pan
Journal:  Mol Cell       Date:  2022-01-14       Impact factor: 17.970

2.  RNA modifications stabilize the tertiary structure of tRNAfMet by locally increasing conformational dynamics.

Authors:  Thomas Biedenbänder; Vanessa de Jesus; Martina Schmidt-Dengler; Mark Helm; Björn Corzilius; Boris Fürtig
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

3.  The nuclear and cytoplasmic activities of RNA polymerase III, and an evolving transcriptome for surveillance.

Authors:  Alan C Kessler; Richard J Maraia
Journal:  Nucleic Acids Res       Date:  2021-12-02       Impact factor: 16.971

4.  Insight into ALKBH8-related intellectual developmental disability based on the first pathogenic missense variant.

Authors:  Sateesh Maddirevula; Seham Alameer; Nour Ewida; Mirta Mittelstedt Leal de Sousa; Magnar Bjørås; Cathrine Broberg Vågbø; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2021-11-10       Impact factor: 4.132

Review 5.  Secret messengers: Extracellular RNA communication in the immune system.

Authors:  Grant K Nation; Cherie E Saffold; Heather H Pua
Journal:  Immunol Rev       Date:  2021-09-20       Impact factor: 12.988

Review 6.  tRNA dysregulation and disease.

Authors:  Esteban A Orellana; Elisabeth Siegal; Richard I Gregory
Journal:  Nat Rev Genet       Date:  2022-06-09       Impact factor: 59.581

7.  The structure of the mouse ADAT2/ADAT3 complex reveals the molecular basis for mammalian tRNA wobble adenosine-to-inosine deamination.

Authors:  Elizabeth Ramos-Morales; Efil Bayam; Jordi Del-Pozo-Rodríguez; Thalia Salinas-Giegé; Martin Marek; Peggy Tilly; Philippe Wolff; Edouard Troesch; Eric Ennifar; Laurence Drouard; Juliette D Godin; Christophe Romier
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

Review 8.  Origins and evolving functionalities of tRNA-derived small RNAs.

Authors:  Qi Chen; Xudong Zhang; Junchao Shi; Menghong Yan; Tong Zhou
Journal:  Trends Biochem Sci       Date:  2021-05-27       Impact factor: 14.264

9.  METTL1/WDR4-mediated m7G tRNA modifications and m7G codon usage promote mRNA translation and lung cancer progression.

Authors:  Jieyi Ma; Hui Han; Ying Huang; Chunlong Yang; Siyi Zheng; Tiancai Cai; Jiong Bi; Xiaohui Huang; Ruiming Liu; Libin Huang; Yifeng Luo; Wen Li; Shuibin Lin
Journal:  Mol Ther       Date:  2021-08-08       Impact factor: 11.454

10.  Changes of the tRNA Modification Pattern during the Development of Dictyostelium discoideum.

Authors:  Anne Hoffmann; Lieselotte Erber; Heike Betat; Peter F Stadler; Mario Mörl; Jörg Fallmann
Journal:  Noncoding RNA       Date:  2021-05-28
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