Literature DB >> 31038926

Variable-Temperature ESI-IMS-MS Analysis of Myohemerythrin Reveals Ligand Losses, Unfolding, and a Non-Native Disulfide Bond.

Daniel W Woodall1, Tarick J El-Baba1, Daniel R Fuller1, Wen Liu2, Christopher J Brown1, Arthur Laganowsky2, David H Russell2, David E Clemmer1.   

Abstract

Variable-temperature electrospray ionization combined with ion mobility spectrometry (IMS) and mass spectrometry (MS) techniques are used to monitor structural transitions of the protein myohemerythrin from peanut worm in aqueous ammonium acetate solutions from ∼15 to 92 °C. At physiological temperatures, myohemerythrin favors a four-helix bundle motif and has a diiron oxo cofactor that binds oxygen. As the solution temperature is increased from ∼15 to 35 °C, some bound oxygen dissociates; at ∼66 °C, the cofactor dissociates to produce populations of both folded and unfolded apoprotein. At higher temperatures (∼85 °C and above), the IMS-MS spectrum indicates that the folded apoprotein dominates, and provides evidence for stabilization of the structure by formation of a non-native disulfide bond. In total, we find evidence for 18 unique forms of myohemerythrin as well as information about the structures and stabilities of these states. The high-fidelity of IMS-MS techniques provides a means of examining the stabilities of individual components of complex mixtures that are inaccessible by traditional calorimetric and spectroscopic methods.

Entities:  

Year:  2019        PMID: 31038926      PMCID: PMC6935875          DOI: 10.1021/acs.analchem.9b00981

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  31 in total

1.  SNPs, protein structure, and disease.

Authors:  Z Wang; J Moult
Journal:  Hum Mutat       Date:  2001-04       Impact factor: 4.878

2.  Identification of long-lived proteins reveals exceptional stability of essential cellular structures.

Authors:  Brandon H Toyama; Jeffrey N Savas; Sung Kyu Park; Michael S Harris; Nicholas T Ingolia; John R Yates; Martin W Hetzer
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

3.  Loss of protein structure stability as a major causative factor in monogenic disease.

Authors:  Peng Yue; Zhaolong Li; John Moult
Journal:  J Mol Biol       Date:  2005-10-21       Impact factor: 5.469

Review 4.  Post-translational modifications in the context of therapeutic proteins.

Authors:  Gary Walsh; Roy Jefferis
Journal:  Nat Biotechnol       Date:  2006-10       Impact factor: 54.908

5.  Thermal activation of the co-chaperonins GroES and gp31 probed by mass spectrometry.

Authors:  Rimco B J Geels; Stephane Calmat; Albert J R Heck; Saskia M van der Vies; Ron M A Heeren
Journal:  Rapid Commun Mass Spectrom       Date:  2008-11       Impact factor: 2.419

6.  Direct monitoring of heat-stressed biopolymers with temperature-controlled electrospray ionization mass spectrometry.

Authors:  Guanbo Wang; Rinat R Abzalimov; Igor A Kaltashov
Journal:  Anal Chem       Date:  2011-03-23       Impact factor: 6.986

7.  Variable-Velocity Traveling-Wave Ion Mobility Separation Enhancing Peak Capacity for Data-Independent Acquisition Proteomics.

Authors:  Sarah E Haynes; Daniel A Polasky; Sugyan M Dixit; Jaimeen D Majmudar; Kieran Neeson; Brandon T Ruotolo; Brent R Martin
Journal:  Anal Chem       Date:  2017-05-09       Impact factor: 6.986

8.  Conformational changes in chemically modified Escherichia coli thioredoxin monitored by H/D exchange and electrospray ionization mass spectrometry.

Authors:  Moo-Young Kim; Claudia S Maier; Donald J Reed; Max L Deinzer
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

9.  Origin of supercharging in electrospray ionization of noncovalent complexes from aqueous solution.

Authors:  Harry J Sterling; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2009-07-03       Impact factor: 3.109

10.  Removal of dissolved oxygen from water: A comparison of four common techniques.

Authors:  I B Butler; M A Schoonen; D T Rickard
Journal:  Talanta       Date:  1994-02       Impact factor: 6.057

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  11 in total

1.  Evidence for Many Unique Solution Structures for Chymotrypsin Inhibitor 2: A Thermodynamic Perspective Derived from vT-ESI-IMS-MS Measurements.

Authors:  Shannon A Raab; Tarick J El-Baba; Daniel W Woodall; Wen Liu; Yang Liu; Zane Baird; David A Hales; Arthur Laganowsky; David H Russell; David E Clemmer
Journal:  J Am Chem Soc       Date:  2020-09-29       Impact factor: 15.419

2.  Following Structural Changes by Thermal Denaturation Using Trapped Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Kevin Jeanne Dit Fouque; Francisco Fernandez-Lima
Journal:  J Phys Chem B       Date:  2020-07-14       Impact factor: 2.991

3.  Melting of Hemoglobin in Native Solutions as measured by IMS-MS.

Authors:  Daniel W Woodall; Christopher J Brown; Shannon A Raab; Tarick J El-Baba; Arthur Laganowsky; David H Russell; David E Clemmer
Journal:  Anal Chem       Date:  2020-02-07       Impact factor: 6.986

Review 4.  Variable-Temperature Native Mass Spectrometry for Studies of Protein Folding, Stabilities, Assembly, and Molecular Interactions.

Authors:  Arthur Laganowsky; David E Clemmer; David H Russell
Journal:  Annu Rev Biophys       Date:  2021-12-21       Impact factor: 19.763

Review 5.  THE IMS PARADOX: A PERSPECTIVE ON STRUCTURAL ION MOBILITY-MASS SPECTROMETRY.

Authors:  Jacob W McCabe; Michael J Hebert; Mehdi Shirzadeh; Christopher S Mallis; Joanna K Denton; Thomas E Walker; David H Russell
Journal:  Mass Spectrom Rev       Date:  2020-07-01       Impact factor: 10.946

6.  Variable-Temperature Electrospray Ionization for Temperature-Dependent Folding/Refolding Reactions of Proteins and Ligand Binding.

Authors:  Jacob W McCabe; Mehdi Shirzadeh; Thomas E Walker; Cheng-Wei Lin; Benjamin J Jones; Vicki H Wysocki; David P Barondeau; David E Clemmer; Arthur Laganowsky; David H Russell
Journal:  Anal Chem       Date:  2021-04-27       Impact factor: 6.986

7.  Thermal Analysis of a Mixture of Ribosomal Proteins by vT-ESI-MS: Toward a Parallel Approach for Characterizing the Stabilitome.

Authors:  Tarick J El-Baba; Shannon A Raab; Rachel P Buckley; Christopher J Brown; Corinne A Lutomski; Lucas W Henderson; Daniel W Woodall; Jiangchuan Shen; Jonathan C Trinidad; Hengyao Niu; Martin F Jarrold; David H Russell; Arthur Laganowsky; David E Clemmer
Journal:  Anal Chem       Date:  2021-06-08       Impact factor: 8.008

8.  Protons Are Fast and Smart; Proteins Are Slow and Dumb: On the Relationship of Electrospray Ionization Charge States and Conformations.

Authors:  Shannon A Raab; Tarick J El-Baba; Arthur Laganowsky; David H Russell; Stephen J Valentine; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2021-06-21       Impact factor: 3.262

Review 9.  Temperature-Controlled Electrospray Ionization: Recent Progress and Applications.

Authors:  Julian Alexander Harrison; Adam Pruška; Irina Oganesyan; Philipp Bittner; Renato Zenobi
Journal:  Chemistry       Date:  2021-11-05       Impact factor: 5.020

10.  Understanding the Thermal Denaturation of Myoglobin with IMS-MS: Evidence for Multiple Stable Structures and Trapped Pre-equilibrium States.

Authors:  Daniel W Woodall; Lucas W Henderson; Shannon A Raab; Kenji Honma; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2020-07-07       Impact factor: 3.109

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