Literature DB >> 31037246

Glioma grading using structural magnetic resonance imaging and molecular data.

Syed M S Reza1, Manar D Samad2, Zeina A Shboul1, Karra A Jones3, Khan M Iftekharuddin1.   

Abstract

A glioma grading method using conventional structural magnetic resonance image (MRI) and molecular data from patients is proposed. The noninvasive grading of glioma tumors is obtained using multiple radiomic texture features including dynamic texture analysis, multifractal detrended fluctuation analysis, and multiresolution fractal Brownian motion in structural MRI. The proposed method is evaluated using two multicenter MRI datasets: (1) the brain tumor segmentation (BRATS-2017) challenge for high-grade versus low-grade (LG) and (2) the cancer imaging archive (TCIA) repository for glioblastoma (GBM) versus LG glioma grading. The grading performance using MRI is compared with that of digital pathology (DP) images in the cancer genome atlas (TCGA) data repository. The results show that the mean area under the receiver operating characteristic curve (AUC) is 0.88 for the BRATS dataset. The classification of tumor grades using MRI and DP images in TCIA/TCGA yields mean AUC of 0.90 and 0.93, respectively. This work further proposes and compares tumor grading performance using molecular alterations (IDH1/2 mutations) along with MRI and DP data, following the most recent World Health Organization grading criteria, respectively. The overall grading performance demonstrates the efficacy of the proposed noninvasive glioma grading approach using structural MRI.

Entities:  

Keywords:  IDH1/2 mutant; dynamic texture; glioma grading; histopathology image; magnetic resonance image; multiresolution fractal

Year:  2019        PMID: 31037246      PMCID: PMC6479231          DOI: 10.1117/1.JMI.6.2.024501

Source DB:  PubMed          Journal:  J Med Imaging (Bellingham)        ISSN: 2329-4302


  19 in total

1.  Detrended fluctuation analysis for fractals and multifractals in higher dimensions.

Authors:  Gao-Feng Gu; Wei-Xing Zhou
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-12-07

2.  Multifractal texture estimation for detection and segmentation of brain tumors.

Authors:  Atiq Islam; Syed M S Reza; Khan M Iftekharuddin
Journal:  IEEE Trans Biomed Eng       Date:  2013-06-27       Impact factor: 4.538

3.  Diagnostic performance of spectroscopic and perfusion MRI for distinction of brain tumors.

Authors:  M A Weber; S Zoubaa; M Schlieter; E Jüttler; H B Huttner; K Geletneky; C Ittrich; M P Lichy; A Kroll; J Debus; F L Giesel; M Hartmann; M Essig
Journal:  Neurology       Date:  2006-06-27       Impact factor: 9.910

4.  Data-driven grading of brain gliomas: a multiparametric MR imaging study.

Authors:  Massimo Caulo; Valentina Panara; Domenico Tortora; Peter A Mattei; Chiara Briganti; Emanuele Pravatà; Simone Salice; Antonio R Cotroneo; Armando Tartaro
Journal:  Radiology       Date:  2014-03-22       Impact factor: 11.105

5.  Malignant astrocytic tumors: clinical importance of apparent diffusion coefficient in prediction of grade and prognosis.

Authors:  Shuichi Higano; Xia Yun; Toshihiro Kumabe; Mika Watanabe; Shunji Mugikura; Atsushi Umetsu; Akihiro Sato; Takayuki Yamada; Shoki Takahashi
Journal:  Radiology       Date:  2006-10-10       Impact factor: 11.105

6.  Patients with IDH1 wild type anaplastic astrocytomas exhibit worse prognosis than IDH1-mutated glioblastomas, and IDH1 mutation status accounts for the unfavorable prognostic effect of higher age: implications for classification of gliomas.

Authors:  Christian Hartmann; Bettina Hentschel; Wolfgang Wick; David Capper; Jörg Felsberg; Matthias Simon; Manfred Westphal; Gabriele Schackert; Richard Meyermann; Torsten Pietsch; Guido Reifenberger; Michael Weller; Markus Loeffler; Andreas von Deimling
Journal:  Acta Neuropathol       Date:  2010-11-19       Impact factor: 17.088

Review 7.  Diffusion-weighted and perfusion MR imaging for brain tumor characterization and assessment of treatment response.

Authors:  James M Provenzale; Srinivasan Mukundan; Daniel P Barboriak
Journal:  Radiology       Date:  2006-06       Impact factor: 11.105

Review 8.  Recent advancements in multimodality treatment of gliomas.

Authors:  Mersiha Hadziahmetovic; Katsuyuki Shirai; Arnab Chakravarti
Journal:  Future Oncol       Date:  2011-10       Impact factor: 3.404

9.  Glioma grading by using histogram analysis of blood volume heterogeneity from MR-derived cerebral blood volume maps.

Authors:  Kyrre E Emblem; Baard Nedregaard; Terje Nome; Paulina Due-Tonnessen; John K Hald; David Scheie; Olivera Casar Borota; Milada Cvancarova; Atle Bjornerud
Journal:  Radiology       Date:  2008-06       Impact factor: 11.105

10.  Classification of brain tumor type and grade using MRI texture and shape in a machine learning scheme.

Authors:  Evangelia I Zacharaki; Sumei Wang; Sanjeev Chawla; Dong Soo Yoo; Ronald Wolf; Elias R Melhem; Christos Davatzikos
Journal:  Magn Reson Med       Date:  2009-12       Impact factor: 4.668

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  9 in total

1.  Differentiating glioblastoma multiforme from cerebral lymphoma: application of advanced texture analysis of quantitative apparent diffusion coefficients.

Authors:  Mehrsad Mehrnahad; Sara Rostami; Farnaz Kimia; Reza Kord; Morteza Sanei Taheri; Hamidreza Saligheh Rad; Hamidreza Haghighatkhah; Afshin Moradi; Ali Kord
Journal:  Neuroradiol J       Date:  2020-07-06

Review 2.  Neuroinflammation and immunoregulation in glioblastoma and brain metastases: Recent developments in imaging approaches.

Authors:  Rafael Roesler; Simone Afonso Dini; Gustavo R Isolan
Journal:  Clin Exp Immunol       Date:  2021-10-08       Impact factor: 4.330

3.  Machine-learning based classification of glioblastoma using delta-radiomic features derived from dynamic susceptibility contrast enhanced magnetic resonance images: Introduction.

Authors:  Jiwoong Jeong; Liya Wang; Bing Ji; Yang Lei; Arif Ali; Tian Liu; Walter J Curran; Hui Mao; Xiaofeng Yang
Journal:  Quant Imaging Med Surg       Date:  2019-07

Review 4.  Approaches to PET Imaging of Glioblastoma.

Authors:  Lindsey R Drake; Ansel T Hillmer; Zhengxin Cai
Journal:  Molecules       Date:  2020-01-28       Impact factor: 4.411

5.  Prediction of malignant glioma grades using contrast-enhanced T1-weighted and T2-weighted magnetic resonance images based on a radiomic analysis.

Authors:  Takahiro Nakamoto; Wataru Takahashi; Akihiro Haga; Satoshi Takahashi; Shigeru Kiryu; Kanabu Nawa; Takeshi Ohta; Sho Ozaki; Yuki Nozawa; Shota Tanaka; Akitake Mukasa; Keiichi Nakagawa
Journal:  Sci Rep       Date:  2019-12-19       Impact factor: 4.379

6.  Context aware deep learning for brain tumor segmentation, subtype classification, and survival prediction using radiology images.

Authors:  Linmin Pei; Lasitha Vidyaratne; Md Monibor Rahman; Khan M Iftekharuddin
Journal:  Sci Rep       Date:  2020-11-12       Impact factor: 4.379

7.  Combining Radiology and Pathology for Automatic Glioma Classification.

Authors:  Xiyue Wang; Ruijie Wang; Sen Yang; Jun Zhang; Minghui Wang; Dexing Zhong; Jing Zhang; Xiao Han
Journal:  Front Bioeng Biotechnol       Date:  2022-03-21

8.  A weakly supervised deep learning-based method for glioma subtype classification using WSI and mpMRIs.

Authors:  Wei-Wen Hsu; Jing-Ming Guo; Linmin Pei; Ling-An Chiang; Yao-Feng Li; Jui-Chien Hsiao; Rivka Colen; Peizhong Liu
Journal:  Sci Rep       Date:  2022-04-12       Impact factor: 4.379

9.  Deep Neural Network Analysis of Pathology Images With Integrated Molecular Data for Enhanced Glioma Classification and Grading.

Authors:  Linmin Pei; Karra A Jones; Zeina A Shboul; James Y Chen; Khan M Iftekharuddin
Journal:  Front Oncol       Date:  2021-07-01       Impact factor: 6.244

  9 in total

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