Literature DB >> 30818200

Photodimerization systems for regulating protein-protein interactions with light.

Jessica I Spiltoir1, Chandra L Tucker2.   

Abstract

Optogenetic dimerizers are modular domains that can be utilized in a variety of versatile ways to modulate cellular biochemistry. Because of their modularity, many applications using these tools can be easily transferred to new targets without extensive engineering. While a number of photodimerizer systems are currently available, the field remains nascent, with new optimizations for existing systems and new approaches to regulating biological function continuing to be introduced at a steady pace.
Copyright © 2019 Elsevier Ltd. All rights reserved.

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Year:  2019        PMID: 30818200      PMCID: PMC6697570          DOI: 10.1016/j.sbi.2019.01.021

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  68 in total

1.  Photoexcited CRY2 interacts with CIB1 to regulate transcription and floral initiation in Arabidopsis.

Authors:  Hongtao Liu; Xuhong Yu; Kunwu Li; John Klejnot; Hongyun Yang; Dominique Lisiero; Chentao Lin
Journal:  Science       Date:  2008-11-06       Impact factor: 47.728

2.  Blue light-mediated manipulation of transcription factor activity in vivo.

Authors:  Shinji Masuda; Yuki Nakatani; Shukun Ren; Mikiko Tanaka
Journal:  ACS Chem Biol       Date:  2013-09-24       Impact factor: 5.100

3.  Engineering an improved light-induced dimer (iLID) for controlling the localization and activity of signaling proteins.

Authors:  Gurkan Guntas; Ryan A Hallett; Seth P Zimmerman; Tishan Williams; Hayretin Yumerefendi; James E Bear; Brian Kuhlman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-22       Impact factor: 11.205

4.  CRISPR-Cas9-based photoactivatable transcription systems to induce neuronal differentiation.

Authors:  Yuta Nihongaki; Yuichi Furuhata; Takahiro Otabe; Saki Hasegawa; Keitaro Yoshimoto; Moritoshi Sato
Journal:  Nat Methods       Date:  2017-09-11       Impact factor: 28.547

5.  Light Control of the Tet Gene Expression System in Mammalian Cells.

Authors:  Mayumi Yamada; Yusuke Suzuki; Shinji C Nagasaki; Hiroyuki Okuno; Itaru Imayoshi
Journal:  Cell Rep       Date:  2018-10-09       Impact factor: 9.423

6.  A light-inducible CRISPR-Cas9 system for control of endogenous gene activation.

Authors:  Lauren R Polstein; Charles A Gersbach
Journal:  Nat Chem Biol       Date:  2015-02-09       Impact factor: 15.040

7.  A bacterial phytochrome-based optogenetic system controllable with near-infrared light.

Authors:  Andrii A Kaberniuk; Anton A Shemetov; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2016-05-09       Impact factor: 28.547

8.  A light-inducible organelle-targeting system for dynamically activating and inactivating signaling in budding yeast.

Authors:  Xiaojing Yang; Anna Payne-Tobin Jost; Orion D Weiner; Chao Tang
Journal:  Mol Biol Cell       Date:  2013-06-12       Impact factor: 4.138

9.  Bidirectional approaches for optogenetic regulation of gene expression in mammalian cells using Arabidopsis cryptochrome 2.

Authors:  Gopal P Pathak; Jessica I Spiltoir; Camilla Höglund; Lauren R Polstein; Sari Heine-Koskinen; Charles A Gersbach; Jari Rossi; Chandra L Tucker
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

10.  Computational design of chemogenetic and optogenetic split proteins.

Authors:  Onur Dagliyan; Andrey Krokhotin; Irem Ozkan-Dagliyan; Alexander Deiters; Channing J Der; Klaus M Hahn; Nikolay V Dokholyan
Journal:  Nat Commun       Date:  2018-10-02       Impact factor: 14.919

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  8 in total

1.  Visualization and Manipulation of Intracellular Signaling.

Authors:  Yuhei Goto; Yohei Kondo; Kazuhiro Aoki
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 2.  Lighting up single-mRNA translation dynamics in living cells.

Authors:  Charlotte A Cialek; Amanda L Koch; Gabriel Galindo; Timothy J Stasevich
Journal:  Curr Opin Genet Dev       Date:  2020-05-11       Impact factor: 5.578

Review 3.  Optophysiology: Illuminating cell physiology with optogenetics.

Authors:  Peng Tan; Lian He; Yun Huang; Yubin Zhou
Journal:  Physiol Rev       Date:  2022-01-24       Impact factor: 37.312

4.  Imaging translational control by Argonaute with single-molecule resolution in live cells.

Authors:  Charlotte A Cialek; Gabriel Galindo; Tatsuya Morisaki; Ning Zhao; Taiowa A Montgomery; Timothy J Stasevich
Journal:  Nat Commun       Date:  2022-06-10       Impact factor: 17.694

Review 5.  Engineering Light-Control in Biology.

Authors:  Armin Baumschlager
Journal:  Front Bioeng Biotechnol       Date:  2022-04-28

6.  Optogenetics reveals Cdc42 local activation by scaffold-mediated positive feedback and Ras GTPase.

Authors:  Iker Lamas; Laura Merlini; Aleksandar Vještica; Vincent Vincenzetti; Sophie G Martin
Journal:  PLoS Biol       Date:  2020-01-24       Impact factor: 8.029

Review 7.  Dual Systems for Enhancing Control of Protein Activity through Induced Dimerization Approaches.

Authors:  Sarah Pearce; Chandra L Tucker
Journal:  Adv Biol (Weinh)       Date:  2021-01-14

8.  A light way for nuclear cell biologists.

Authors:  Giada Forlani; Barbara Di Ventura
Journal:  J Biochem       Date:  2021-04-18       Impact factor: 3.387

  8 in total

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