| Literature DB >> 30814121 |
Pu Wang1, Tyler M Berzin2, Jeremy Romek Glissen Brown2, Shishira Bharadwaj2, Aymeric Becq2, Xun Xiao1, Peixi Liu1, Liangping Li1, Yan Song1, Di Zhang1, Yi Li1, Guangre Xu1, Mengtian Tu1, Xiaogang Liu1.
Abstract
OBJECTIVE: The effect of colonoscopy on colorectal cancer mortality is limited by several factors, among them a certain miss rate, leading to limited adenoma detection rates (ADRs). We investigated the effect of an automatic polyp detection system based on deep learning on polyp detection rate and ADR.Entities:
Keywords: colonoscopy; colorectal cancer screening; computerised image analysis
Mesh:
Year: 2019 PMID: 30814121 PMCID: PMC6839720 DOI: 10.1136/gutjnl-2018-317500
Source DB: PubMed Journal: Gut ISSN: 0017-5749 Impact factor: 23.059
Figure 1Deep learning architecture. The detection algorithm is a deep convolutional neural network (CNN) based on SegNet architecture. Data flow is from left to right: a colonoscopy image is sequentially warped into a binary image, with 1 representing polyp pixels and 0 representing no polyp in probability a map. This is then displayed, as showed in the output, with a hollow tracing box on the CADe monitor.
Figure 2Flow Diagram of Enrollment. 1130 patients met the inclusion criteria, and 72 of them were exclude because of failed procedures, diagnosed IBD or CRC. CRC, colorectal cancer; IBD, inflammatory bowel disease.
Baseline information
| Characteristics | Routine colonoscopy | CADe colonoscopy | P* value |
| Age, mean (SD) | 49.94 (±13.79) | 51.07 (±13.15) | 0.16 |
| BMI, mean (SD) | 23.02 (±3.14) | 23.03 (±2.93) | 0.99 |
| Withdrawal time, mean (SD) | 6.39 (±1.21) | 6.89 (±1.79) | <0.001 |
| Total time, mean (SD) | 12.10 (±4.08) | 12.52 (±4.38) | 0.11 |
| Insertion time, mean (SD) | 5.71 (±3.90) | 5.63 (±4.03) | 0.75 |
| No polyp withdrawal time, mean (SD) | 6.13 (±1.07) | 6.17 (±0.94) | 0.58 |
| Withdrawal time excluding biopsy, mean (SD) | 6.07 (±1.11) | 6.18 (±1.38) | 0.15 |
| Indication |
| ||
| Screening, n (%) | 44 (8.21) | 40 (7.66) | |
| Symptomatic, n (%) | 492 (91.79) | 482 (92.34) | |
| Sex | 0.19 | ||
| Female, n (%) | 287 (53.54) | 259 (49.62) | |
| Male, n (%) | 249 (46.46) | 263 (50.38) | |
| BMI category | 0.5 | ||
| <25, n (%) | 408 (76.12) | 403 (77.20) | |
| 25<=BMI<30, n (%) | 117 (21.83) | 113 (21.65) | |
| ≥30, n (%) | 11 (2.05) | 6 (1.15) | |
| Procedure time | 0.61 | ||
| AM, n (%) | 280 (52.24) | 264 (50.57) | |
| PM, n (%) | 256 (47.76) | 258 (49.43) | |
| Endoscope | 0.6 | ||
| CF-H260, n (%) | 156 (29.10) | 160 (30.65) | |
| CF-Q260, n (%) | 380 (70.90) | 362 (69.35) | |
| Anaesthesia† | 0.95 | ||
| No, n (%) | 68 (12.69) | 67 (12.84) | |
| Yes, n (%) | 468 (87.31) | 455 (87.16) | |
| Boston Score, mean (SD) | 6.64 (1.25) | 6.64 (1.21) | 0.95 |
| Boston Score Rank | 0.72 | ||
| Inadequate (sum <6.0 or anyone <2.0), n (%) | 79 (14.74) | 73 (13.98) | |
| Adequate (sum ≥6.0 and everyone ≥2.0), n (%) | 457 (85.26) | 449 (86.02) | |
| Endoscopist experience | 0.33 | ||
| Senior, n (%) | 233 (43.47) | 203 (38.89) | |
| Midlevel, n (%) | 236 (44.03) | 251 (48.08) | |
| Junior, n (%) | 67 (12.50) | 68 (13.03) | |
No polyp withdrawal time means withdrawal time during those colonoscopies where no polyp was detected or removed.
*P value from χ2 test (or Fisher’s exact test, as appropriate) or t-test.
†Anaesthesia was administered with midazolam, fentanyl by an anaesthesiologist who monitored the patients for complications.
BMI, body mass index; NSAID, non-steroidal anti-inflammatory drug.
Polyp and adenoma characteristics
| Characteristics | Routine colonoscopy | CADe colonoscopy | P value* |
| Pathology | 0.173 | ||
| Carcinoma, n (%) | 0 (0.00) | 0 (0.00) | 1.000 |
| Sessile serrated adenoma/polyp (SSAP), n (%) | 14 (5.20) | 17 (3.41) | 0.541 |
| Adenoma, n (%) | |||
| Advanced adenoma, n (%) | 16 (5.95) | 17 (3.41) | 0.803 |
| Others, n (%) | 144 (53.53) | 245 (49.20) | <0.001 |
| Benign lesions, n (%) | |||
| Hyperplastic and Inflammatory | 94 (34.94) | 217 (43.57) | <0.001 |
| Hamartoma | 0 (0.00) | 0 (0.00) | 1.000 |
| Normal colon mucosa | 1 (0.37) | 2 (0.40) | 0.557 |
| Polyp location | <0.001 | ||
| Caecum, n (%) | 3 (1.12) | 5 (1.00) | 0.462 |
| Ascending, n (%) | 47 (17.47) | 97 (19.48) | <0.001 |
| Transverse, n (%) | 45 (16.73) | 110 (22.09) | <0.001 |
| Descending, n (%) | 26 (9.67) | 75 (15.06) | <0.001 |
| Sigmoid, n (%) | 79 (29.37) | 130 (26.10) | <0.001 |
| Rectum, n (%) | 69 (25.65) | 81 (16.27) | 0.254 |
| Polyp shape | 0.076 | ||
| Pedunculated, n (%) | 38 (14.13) | 49 (9.84) | 0.194 |
| Sessile, n (%) | 98 (36.43) | 176 (35.34) | <0.001 |
| Flat, n (%) | 133 (49.44) | 273 (54.82) | <0.001 |
| Polyp size (mm), mean (SD) | 5.03 (3.72) | 4.51 (2.55) | 0.050 |
| Polyp size category | 0.096 | ||
| 0–5 mm, n (%) | 198 (73.61) | 399 (80.12) | <0.001 |
| 6–10 mm, n (%) | 61 (22.68) | 83 (16.67) | 0.047 |
| >10 mm, n (%) | 10 (3.72) | 16 (3.21) | 0.218 |
| Adenoma location | 0.397 | ||
| Caecum, n (%) | 1 (0.62) | 3 (1.15) | 0.330 |
| Ascending, n (%) | 39 (24.38) | 47 (17.94) | 0.325 |
| Transverse, n (%) | 36 (22.50) | 72 (27.48) | <0.001 |
| Descending, n (%) | 20 (12.50) | 44 (16.79) | 0.003 |
| Sigmoid, n (%) | 41 (25.62) | 64 (24.43) | 0.018 |
| Rectum, n (%) | 23 (14.37) | 32 (12.21) | 0.192 |
| Adenoma shape | 0.277 | ||
| Pedunculated, n (%) | 33 (20.62) | 39 (14.89) | 0.413 |
| Sessile, n (%) | 64 (40.00) | 105 (40.08) | 0.001 |
| Flat, n (%) | 63 (39.38) | 118 (45.04) | <0.001 |
| Adenoma size (mm), mean (SD) | 5.56 (3.54) | 5.26 (3.08) | 0.372 |
| Adenoma size category | 0.169 | ||
| 0–5 mm, n (%) | 102 (63.75) | 185 (70.61) | <0.001 |
| 6–10 mm, n (%) | 50 (31.25) | 61 (23.28) | 0.238 |
| >10 mm, n (%) | 8 (5.00) | 16 (6.11) | 0.097 |
*P value from χ2 test (or Fisher’s exact test, as appropriate).
Polyp and adenoma detection
| Routine colonoscopy (n=536) | CADe colonoscopy (n=522) | P value* | FC/OR | 95% CI | |
| PDR | 0.291 | 0.4502 | <0.001 | 1.995† | 1.532 to 2.544 |
| ADR | 0.2034 | 0.2912 | <0.001 | 1.61† | 1.213 to 2.135 |
| Mean number of detected polyp | 0.5019 | 0.954 | <0.001 | 1.89‡ | 1.63 to 2.192 |
| Mean number of detected adenoma | 0.3097 | 0.5326 | <0.001 | 1.72‡ | 1.419 to 2.084 |
*P value from χ2 test (or Fisher’s exact test, as appropriate) or t-test.
†OR.
‡FC.
ADR, adenoma detection rate; FC, fold change; PDR, polyp detection rate.
Outcomes in excellent bowel preparation (BBPS ≥7)
| Routine colonoscopy (n=293) | CADe colonoscopy (n=292) | P value* | FC/OR | 95% CI | |
| PDR | 0.2935 | 0.4144 | 0.002 | 1.703† | 1.209 to 2.399 |
| ADR | 0.2082 | 0.2637 | 0.12 | 1.356† | 0.924 to 1.991 |
| Mean number of detected polyp | 0.5017 | 0.8116 | <0.001 | 1.618‡ | 1.317 to 1.987 |
| Mean number of detected adenoma | 0.2867 | 0.4212 | 0.007 | 1.464‡ | 1.11 to 1.932 |
*P value from χ2 test (or Fisher’s exact test, as appropriate) or t-test.
†OR.
‡FC.
ADR, adenoma detection rate; FC, fold change; PDR, polyp detection rate.
Statistical results of false alarms and missed polyp
| CADe colonoscopy, n (%) | |
| False alarm | 39 (100.00) |
| Bubble | 13 (33.33) |
| Faeces | 5 (12.82) |
| Undigested debris | 4 (10.26) |
| Wrinkled mucosa | 7 (17.95) |
| Local inflammation | 5 (12.82) |
| Local bleeding | 1 (2.56) |
| Rounded drug capsules | 4 (10.26) |
| Other (circular blood vessel, scar, diverticulum and so on) | 0 (0.00) |
| Missed polyp | 0 (0.00) |