Literature DB >> 30762372

DNA-Compatible [3 + 2] Nitrone-Olefin Cycloaddition Suitable for DEL Syntheses.

Christopher J Gerry1,2, Zhenhua Yang2, Michele Stasi2, Stuart L Schreiber1,2.   

Abstract

The limited scope of DNA-compatible chemistry restricts the types of chemical features that can be incorporated into DNA-encoded libraries (DELs). Here, a method to synthesize DNA-conjugated polycyclic isoxazolidines via a [3 + 2] nitrone-olefin cycloaddition is described. The reaction is compatible with many olefin-containing substrates and diverse N-alkylhydroxylamines. The ability to perform subsequent DNA ligation and PCR amplification was also confirmed. This methodology facilitates the synthesis of DELs containing topographically complex compounds with underexplored chemical features.

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Year:  2019        PMID: 30762372      PMCID: PMC6894513          DOI: 10.1021/acs.orglett.9b00017

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  22 in total

Review 1.  Chemical Biology Probes from Advanced DNA-encoded Libraries.

Authors:  Hazem Salamon; Mateja Klika Škopić; Kathrin Jung; Olivia Bugain; Andreas Brunschweiger
Journal:  ACS Chem Biol       Date:  2016-01-28       Impact factor: 5.100

2.  Encoded combinatorial chemistry.

Authors:  S Brenner; R A Lerner
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

3.  Expanding the reaction scope of DNA-templated synthesis.

Authors:  Zev J Gartner; Matthew W Kanan; David R Liu
Journal:  Angew Chem Int Ed Engl       Date:  2002-05-17       Impact factor: 15.336

4.  DNA-encoded chemical libraries: advancing beyond conventional small-molecule libraries.

Authors:  Raphael M Franzini; Dario Neri; Jörg Scheuermann
Journal:  Acc Chem Res       Date:  2014-03-28       Impact factor: 22.384

5.  Chemical Space of DNA-Encoded Libraries.

Authors:  Raphael M Franzini; Cassie Randolph
Journal:  J Med Chem       Date:  2016-02-25       Impact factor: 7.446

6.  A Chemical Biology View of Bioactive Small Molecules and a Binder-Based Approach to Connect Biology to Precision Medicines.

Authors:  Stuart L Schreiber
Journal:  Isr J Chem       Date:  2018-10-30       Impact factor: 3.333

7.  DNA Barcoding a Complete Matrix of Stereoisomeric Small Molecules.

Authors:  Christopher J Gerry; Mathias J Wawer; Paul A Clemons; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2019-06-25       Impact factor: 15.419

Review 8.  Isoxazolidine: A Privileged Scaffold for Organic and Medicinal Chemistry.

Authors:  Mathéo Berthet; Thomas Cheviet; Gilles Dujardin; Isabelle Parrot; Jean Martinez
Journal:  Chem Rev       Date:  2016-12-16       Impact factor: 60.622

9.  DNA Compatible Multistep Synthesis and Applications to DNA Encoded Libraries.

Authors:  Alexander Lee Satz; Jianping Cai; Yi Chen; Robert Goodnow; Felix Gruber; Agnieszka Kowalczyk; Ann Petersen; Goli Naderi-Oboodi; Lucja Orzechowski; Quentin Strebel
Journal:  Bioconjug Chem       Date:  2015-07-10       Impact factor: 4.774

10.  Inverse-Electron-Demand Diels-Alder Reactions for the Synthesis of Pyridazines on DNA.

Authors:  Hailong Li; Zhen Sun; Wenting Wu; Xuan Wang; Mingqiang Zhang; Xiaojie Lu; Wenge Zhong; Dongcheng Dai
Journal:  Org Lett       Date:  2018-10-26       Impact factor: 6.005

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  9 in total

1.  Expanding Reactivity in DNA-Encoded Library Synthesis via Reversible Binding of DNA to an Inert Quaternary Ammonium Support.

Authors:  Dillon T Flood; Shota Asai; Xuejing Zhang; Jie Wang; Leonard Yoon; Zoë C Adams; Blythe C Dillingham; Brittany B Sanchez; Julien C Vantourout; Mark E Flanagan; David W Piotrowski; Paul Richardson; Samantha A Green; Ryan A Shenvi; Jason S Chen; Phil S Baran; Philip E Dawson
Journal:  J Am Chem Soc       Date:  2019-06-12       Impact factor: 15.419

2.  A Solution Phase Platform to Characterize Chemical Reaction Compatibility with DNA-Encoded Chemical Library Synthesis.

Authors:  Anokha S Ratnayake; Mark E Flanagan; Timothy L Foley; Justin D Smith; Jillian G Johnson; Justin Bellenger; Justin I Montgomery; Brian M Paegel
Journal:  ACS Comb Sci       Date:  2019-09-06       Impact factor: 3.784

3.  Considerations for Achieving Maximized DNA Recovery in Solid-Phase DNA-Encoded Library Synthesis.

Authors:  Alexander K Price; Brian M Paegel
Journal:  ACS Comb Sci       Date:  2020-08-24       Impact factor: 3.784

4.  DNA Barcoding a Complete Matrix of Stereoisomeric Small Molecules.

Authors:  Christopher J Gerry; Mathias J Wawer; Paul A Clemons; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2019-06-25       Impact factor: 15.419

5.  Open-Air Alkylation Reactions in Photoredox-Catalyzed DNA-Encoded Library Synthesis.

Authors:  James P Phelan; Simon B Lang; Jaehoon Sim; Simon Berritt; Andrew J Peat; Katelyn Billings; Lijun Fan; Gary A Molander
Journal:  J Am Chem Soc       Date:  2019-02-12       Impact factor: 15.419

Review 6.  Chemical composition of DNA-encoded libraries, past present and future.

Authors:  Paige Dickson; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

7.  Water-Compatible Cycloadditions of Oligonucleotide-Conjugated Strained Allenes for DNA-Encoded Library Synthesis.

Authors:  Matthias V Westphal; Liam Hudson; Jeremy W Mason; Johan A Pradeilles; Frédéric J Zécri; Karin Briner; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2020-04-16       Impact factor: 15.419

8.  Solid-phase synthesis of DNA-encoded libraries via an "aldehyde explosion" strategy.

Authors:  Nicholas G Paciaroni; John M Ndungu; Thomas Kodadek
Journal:  Chem Commun (Camb)       Date:  2020-03-26       Impact factor: 6.222

9.  Merging C(sp3)-H activation with DNA-encoding.

Authors:  Zhoulong Fan; Shuai Zhao; Tao Liu; Peng-Xiang Shen; Zi-Ning Cui; Zhe Zhuang; Qian Shao; Jason S Chen; Anokha S Ratnayake; Mark E Flanagan; Dominik K Kölmel; David W Piotrowski; Paul Richardson; Jin-Quan Yu
Journal:  Chem Sci       Date:  2020-09-07       Impact factor: 9.825

  9 in total

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