Literature DB >> 31136164

Expanding Reactivity in DNA-Encoded Library Synthesis via Reversible Binding of DNA to an Inert Quaternary Ammonium Support.

Dillon T Flood1, Shota Asai1, Xuejing Zhang1,2, Jie Wang1, Leonard Yoon1, Zoë C Adams1, Blythe C Dillingham1, Brittany B Sanchez3, Julien C Vantourout1, Mark E Flanagan4, David W Piotrowski4, Paul Richardson5, Samantha A Green1, Ryan A Shenvi1, Jason S Chen3, Phil S Baran1, Philip E Dawson1.   

Abstract

DNA Encoded Libraries have proven immensely powerful tools for lead identification. The ability to screen billions of compounds at once has spurred increasing interest in DEL development and utilization. Although DEL provides access to libraries of unprecedented size and diversity, the idiosyncratic and hydrophilic nature of the DNA tag severely limits the scope of applicable chemistries. It is known that biomacromolecules can be reversibly, noncovalently adsorbed and eluted from solid supports, and this phenomenon has been utilized to perform synthetic modification of biomolecules in a strategy we have described as reversible adsorption to solid support (RASS). Herein, we present the adaptation of RASS for a DEL setting, which allows reactions to be performed in organic solvents at near anhydrous conditions opening previously inaccessible chemical reactivities to DEL. The RASS approach enabled the rapid development of C(sp2)-C(sp3) decarboxylative cross-couplings with broad substrate scope, an electrochemical amination (the first electrochemical synthetic transformation performed in a DEL context), and improved reductive amination conditions. The utility of these reactions was demonstrated through a DEL-rehearsal in which all newly developed chemistries were orchestrated to afford a compound rich in diverse skeletal linkages. We believe that RASS will offer expedient access to new DEL reactivities, expanded chemical space, and ultimately more drug-like libraries.

Entities:  

Year:  2019        PMID: 31136164      PMCID: PMC7033622          DOI: 10.1021/jacs.9b03774

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  37 in total

Review 1.  Electrochemical modification of proteins. A review.

Authors:  D J Walton; J Heptinstall
Journal:  Prep Biochem Biotechnol       Date:  2000-02       Impact factor: 2.162

2.  Analysis of Past and Present Synthetic Methodologies on Medicinal Chemistry: Where Have All the New Reactions Gone?

Authors:  Dean G Brown; Jonas Boström
Journal:  J Med Chem       Date:  2015-12-01       Impact factor: 7.446

3.  Encoded combinatorial chemistry.

Authors:  S Brenner; R A Lerner
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

4.  Direct oxidative cyanation based on the concept of site isolation.

Authors:  Toshiki Tajima; Atsushi Nakajima
Journal:  J Am Chem Soc       Date:  2008-07-18       Impact factor: 15.419

5.  Generation and screening of an oligonucleotide-encoded synthetic peptide library.

Authors:  M C Needels; D G Jones; E H Tate; G L Heinkel; L M Kochersperger; W J Dower; R W Barrett; M A Gallop
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-15       Impact factor: 11.205

6.  Oxidative DNA damage & repair: An introduction.

Authors:  Jean Cadet; Kelvin J A Davies
Journal:  Free Radic Biol Med       Date:  2017-03-28       Impact factor: 7.376

7.  Mechanistic Interrogation of Co/Ni-Dual Catalyzed Hydroarylation.

Authors:  Sophia L Shevick; Carla Obradors; Ryan A Shenvi
Journal:  J Am Chem Soc       Date:  2018-09-18       Impact factor: 15.419

8.  Oxidation of DNA: damage to nucleobases.

Authors:  Sriram Kanvah; Joshy Joseph; Gary B Schuster; Robert N Barnett; Charles L Cleveland; Uzi Landman
Journal:  Acc Chem Res       Date:  2010-02-16       Impact factor: 22.384

9.  Highly chemoselective reductive amination of carbonyl compounds promoted by InCl3/Et3SiH/MeOH system.

Authors:  On-Yi Lee; Ka-Lun Law; Chun-Yu Ho; Dan Yang
Journal:  J Org Chem       Date:  2008-10-22       Impact factor: 4.354

10.  On-DNA Pd and Cu promoted C-N cross-coupling reactions.

Authors:  Xiaojie Lu; Sarah E Roberts; George J Franklin; Christopher P Davie
Journal:  Medchemcomm       Date:  2017-07-12       Impact factor: 3.597

View more
  25 in total

1.  Considerations for Achieving Maximized DNA Recovery in Solid-Phase DNA-Encoded Library Synthesis.

Authors:  Alexander K Price; Brian M Paegel
Journal:  ACS Comb Sci       Date:  2020-08-24       Impact factor: 3.784

2.  DNA Barcoding a Complete Matrix of Stereoisomeric Small Molecules.

Authors:  Christopher J Gerry; Mathias J Wawer; Paul A Clemons; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2019-06-25       Impact factor: 15.419

3.  RASS-Enabled S/P-C and S-N Bond Formation for DEL Synthesis.

Authors:  Dillon T Flood; Xuejing Zhang; Xiang Fu; Zhenxiang Zhao; Shota Asai; Brittany B Sanchez; Emily J Sturgell; Julien C Vantourout; Paul Richardson; Mark E Flanagan; David W Piotrowski; Dominik K Kölmel; Jinqiao Wan; Mei-Hsuan Tsai; Jason S Chen; Phil S Baran; Philip E Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2020-03-11       Impact factor: 15.336

4.  Antibacterial Discovery via Phenotypic DNA-Encoded Library Screening.

Authors:  Wesley G Cochrane; Patrick R Fitzgerald; Brian M Paegel
Journal:  ACS Chem Biol       Date:  2021-11-20       Impact factor: 5.100

5.  Decarboxylative Cross-Coupling: A Radical Tool in Medicinal Chemistry.

Authors:  Gabriele Laudadio; Maximilian D Palkowitz; Tamara El-Hayek Ewing; Phil S Baran
Journal:  ACS Med Chem Lett       Date:  2022-08-10       Impact factor: 4.632

6.  Water-Compatible Cycloadditions of Oligonucleotide-Conjugated Strained Allenes for DNA-Encoded Library Synthesis.

Authors:  Matthias V Westphal; Liam Hudson; Jeremy W Mason; Johan A Pradeilles; Frédéric J Zécri; Karin Briner; Stuart L Schreiber
Journal:  J Am Chem Soc       Date:  2020-04-16       Impact factor: 15.419

7.  Multifunctional Building Blocks Compatible with Photoredox-Mediated Alkylation for DNA-Encoded Library Synthesis.

Authors:  Shorouk O Badir; Jaehoon Sim; Katelyn Billings; Adam Csakai; Xuange Zhang; Weizhe Dong; Gary A Molander
Journal:  Org Lett       Date:  2020-01-15       Impact factor: 6.005

8.  Merging C(sp3)-H activation with DNA-encoding.

Authors:  Zhoulong Fan; Shuai Zhao; Tao Liu; Peng-Xiang Shen; Zi-Ning Cui; Zhe Zhuang; Qian Shao; Jason S Chen; Anokha S Ratnayake; Mark E Flanagan; Dominik K Kölmel; David W Piotrowski; Paul Richardson; Jin-Quan Yu
Journal:  Chem Sci       Date:  2020-09-07       Impact factor: 9.825

9.  Highly efficient on-DNA amide couplings promoted by micelle forming surfactants for the synthesis of DNA encoded libraries.

Authors:  James H Hunter; Matthew J Anderson; Isaline F S F Castan; Jessica S Graham; Catherine L A Salvini; Harriet A Stanway-Gordon; James J Crawford; Andrew Madin; Garry Pairaudeau; Michael J Waring
Journal:  Chem Sci       Date:  2021-06-22       Impact factor: 9.825

10.  ChemBead Enabled High-Throughput Cross-Electrophile Coupling Reveals a New Complementary Ligand.

Authors:  Ana L Aguirre; Nathan L Loud; Keywan A Johnson; Daniel J Weix; Ying Wang
Journal:  Chemistry       Date:  2021-07-29       Impact factor: 5.020

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.