| Literature DB >> 30532780 |
Anelise Russo1, Patrícia M Biselli-Chicote1, Rosa S Kawasaki-Oyama1, Márcia M U Castanhole-Nunes1, José V Maniglia2, Dalísio de Santi Neto3, Érika C Pavarino1, Eny M Goloni-Bertollo1.
Abstract
INTRODUCTION: Differential expression of genes encoding cytochrome P450 (CYP) and other oxygenases enzymes involved in biotransformation mechanisms of endogenous and exogenous compounds can lead to oral tumor development.Entities:
Year: 2018 PMID: 30532780 PMCID: PMC6250001 DOI: 10.1155/2018/6301980
Source DB: PubMed Journal: J Oncol ISSN: 1687-8450 Impact factor: 4.375
Figure 1Graphical representation of the TaqMan® Array Human CYP450 and other Oxygenases 96-well Plate.
Differential gene expression in OSCC compared to adjacent non-tumor tissue.
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| 1593 | 0.4952 | 0.3721 | 0.0064 | 0.00323 | 0.003174 |
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| 1571 | 0.5111 | 0.387 | 0.0091 | 0.00484 | 0.004261 |
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| 120227 | 0.5472 | 0.4618 | 0.0276 | 0.00726 | 0.020342 |
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| 1573 | 0.4178 | 0.2963 | 0.0009 | 0.00081 | 0.000094 |
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| 113612 | 0.6086 | 0.4472 | 0.0425 | 0.00968 | 0.032823 |
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| 66002 | 0.4057 | 0.417 | 0.005 | 0.00242 | 0.002581 |
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| 260293 | 0.4639 | 0.4158 | 0.0082 | 0.00403 | 0.004168 |
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| 5740 | 0.3479 | 0.3419 | 0.001 | 0.00161 |
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| p – p' | ||
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| 239 | 0.03578 | 0.2277 | 0.0391 | 0.00806 | 0.031035 |
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| 1594 | 1.927 | 6.343 | 0.0391 | 0.00887 | 0.030229 |
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| 1580 | 0.08512 | 0.618 | 0.0234 | 0.00645 | 0.016948 |
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| 4129 | 0.1882 | 0.3693 | 0.0156 | 0.00565 | 0.009955 |
aGene Identification second-base gene data, the National Center for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/gene); bStandard Deviation; c75th Percentile; p' value after Benjamini-Hochberg False Discovery Rate; p-p' Statistical significance occurs when the p value of the individual tests is less than the p' value after correction for multiple tests. Significance is only confirmed for negative result of the subtraction of these values (value p - value p'), emphasized in bold.
Figure 2Gene expression in oral tumors in relation to non-tumor tissues. (a) Genes analyzed by One Sample T Test (mean with standard deviation). The RQ values are presented in linear scale. (b) Genes analyzed by Wilcoxon signed rank test (median with interquartile variation). The RQ values are shown in base 10 logarithmic scale.
The metabolic pathways of Human species related to the 12 differentially expressed genes in OSCC.
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| Metabolism of xenobiotics by cytochrome P450 | CYP2E1, CYP4B1 and CYP4F12 |
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| Chemical carcinogenesis | CYP2E1 and CYP4B1 |
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| Drug metabolism by cytochrome P450 | CYP2E1, MAOB, CYP4B1 and CYP4F12 |
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| Serotonergic synapse | ALOX12, CYP2J2, CYP4X1 and MAOB |
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| Arachidonic acid metabolism | ALOX12, CYP2E1, CYP2J2, CYP2U1, CYP4F12 and PTGIS |
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| Inflammatory mediator regulation of TRPa channels | ALOX12 and CYP2J2 |
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| PPARb signaling pathway | CYP27A1 |
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| Steroid biosynthesis | CYP2R1 and CYP27B1 |
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| Steroid hormone biosynthesis | CYP2E1 |
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| Primary bile acid biosynthesis | CYP27A1 |
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| Linoleic acid metabolism | CYP2E1 and CYP2J2 |
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| Amino acids metabolismc | MAOB |
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| Ovarian steroidogenesis | CYP2J2 |
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| Tuberculosis | CYP27B1 |
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| Nonalcoholic fatty liver disease (NAFLD) | CYP2E1 |
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| Dopaminergic synapse | MAOB |
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| Amphetamine, cocaine, and alcohol addiction | MAOB |
aTRP: Transient Receptor Potential; bPPAR: Peroxisome Proliferator Activated Receptors. cThe amino acids include glycine, serine, threonine, tyrosine, tryptophan, histidine, arginine, proline, and phenylalanine.
Figure 3Protein expression by ELISA assay in oral tumors compared to non-tumor tissues. (a), (b) and (c) Results of Mann Whitney test (median with interquartile variation). (d) Results of Unpaired T test (mean with standard deviation). (e) Results of Wilcoxon matched paired test (median with interquartile variation), in bold the statistically significant p value. The concentration values of proteins are presented in linear scale.
Figure 4Analysis of ALOX12B and PTGIS proteins expression in tumor and non-tumor tissue by Immunohistochemistry. I: Expression of ALOX12B protein; the arrows show weak labeling (brown staining) of non-tumor squamous cells in (a) and OSCC cells in (b). II: Expression of PTGIS protein; the arrows show moderate labeling (brown staining) of non-tumor squamous cells in (a) and weak labeling of OSCC cells in (b).