Literature DB >> 25038229

Novel drug candidates for the treatment of metastatic colorectal cancer through global inverse gene-expression profiling.

Vera van Noort1, Sebastian Schölch2, Murat Iskar3, Georg Zeller3, Kristina Ostertag4, Christine Schweitzer2, Kristin Werner2, Jürgen Weitz2, Moritz Koch5, Peer Bork6.   

Abstract

Drug-induced gene-expression profiles that invert disease profiles have recently been illustrated to be a starting point for drug repositioning. In this study, we validate this approach and focus on prediction of novel drugs for colorectal cancer, for which there is a pressing need to find novel antimetastatic compounds. We computationally predicted three novel and still unknown compounds against colorectal cancer: citalopram (an antidepressant), troglitazone (an antidiabetic), and enilconazole (a fungicide). We verified the compounds by in vitro assays of clonogenic survival, proliferation, and migration and in a subcutaneous mouse model. We found evidence that the mode of action of these compounds may be through inhibition of TGFβ signaling. Furthermore, one compound, citalopram, reduced tumor size as well as the number of circulating tumor cells and metastases in an orthotopic mouse model of colorectal cancer. This study proposes citalopram as a potential therapeutic option for patients with colorectal cancer, illustrating the potential of systems pharmacology. ©2014 American Association for Cancer Research.

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Year:  2014        PMID: 25038229     DOI: 10.1158/0008-5472.CAN-13-3540

Source DB:  PubMed          Journal:  Cancer Res        ISSN: 0008-5472            Impact factor:   12.701


  36 in total

1.  OCTAD: an open workspace for virtually screening therapeutics targeting precise cancer patient groups using gene expression features.

Authors:  Billy Zeng; Benjamin S Glicksberg; Patrick Newbury; Evgeny Chekalin; Jing Xing; Ke Liu; Anita Wen; Caven Chow; Bin Chen
Journal:  Nat Protoc       Date:  2020-12-23       Impact factor: 13.491

2.  An integrated network platform for contextual prioritization of drugs and pathways.

Authors:  Aldo Segura-Cabrera; Navneet Singh; Kakajan Komurov
Journal:  Mol Biosyst       Date:  2015-11

3.  A Genetically Engineered Mouse Model of Sporadic Colorectal Cancer.

Authors:  Alexander M Betzler; Susan Kochall; Linda Blickensdörfer; Sebastian A Garcia; May-Linn Thepkaysone; Lahiri K Nanduri; Michael H Muders; Jürgen Weitz; Christoph Reissfelder; Sebastian Schölch
Journal:  J Vis Exp       Date:  2017-07-06       Impact factor: 1.355

Review 4.  Insights into Computational Drug Repurposing for Neurodegenerative Disease.

Authors:  Manish D Paranjpe; Alice Taubes; Marina Sirota
Journal:  Trends Pharmacol Sci       Date:  2019-07-17       Impact factor: 14.819

5.  Optimal drug prediction from personal genomics profiles.

Authors:  Jianting Sheng; Fuhai Li; Stephen T C Wong
Journal:  IEEE J Biomed Health Inform       Date:  2015-03-13       Impact factor: 5.772

6.  EMUDRA: Ensemble of Multiple Drug Repositioning Approaches to improve prediction accuracy.

Authors:  Xianxiao Zhou; Minghui Wang; Igor Katsyv; Hanna Irie; Bin Zhang
Journal:  Bioinformatics       Date:  2018-09-15       Impact factor: 6.937

7.  Connectivity map-based drug repositioning of bortezomib to reverse the metastatic effect of GALNT14 in lung cancer.

Authors:  Ok-Seon Kwon; Haeseung Lee; Hyeon-Joon Kong; Eun-Ji Kwon; Ji Eun Park; Wooin Lee; Seungmin Kang; Mirang Kim; Wankyu Kim; Hyuk-Jin Cha
Journal:  Oncogene       Date:  2020-05-09       Impact factor: 9.867

8.  Isolation of Circulating Tumor Cells in an Orthotopic Mouse Model of Colorectal Cancer.

Authors:  Susan Kochall; May-Linn Thepkaysone; Sebastián A García; Alexander M Betzler; Jürgen Weitz; Christoph Reissfelder; Sebastian Schölch
Journal:  J Vis Exp       Date:  2017-07-18       Impact factor: 1.355

9.  Computational Discovery of Niclosamide Ethanolamine, a Repurposed Drug Candidate That Reduces Growth of Hepatocellular Carcinoma Cells In Vitro and in Mice by Inhibiting Cell Division Cycle 37 Signaling.

Authors:  Bin Chen; Wei Wei; Li Ma; Bin Yang; Ryan M Gill; Mei-Sze Chua; Atul J Butte; Samuel So
Journal:  Gastroenterology       Date:  2017-03-08       Impact factor: 22.682

Review 10.  Drug repurposing in oncology: Compounds, pathways, phenotypes and computational approaches for colorectal cancer.

Authors:  Patrycja Nowak-Sliwinska; Leonardo Scapozza; Ariel Ruiz i Altaba
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2019-04-26       Impact factor: 10.680

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