| Literature DB >> 30519816 |
E Walton1,2, D Hibar3,4, Z Yilmaz5,6, N Jahanshad3, J Cheung3, V-L Batury2, J Seitz7, C M Bulik5,8,9, P M Thompson3, Stefan Ehrlich10.
Abstract
In MRI scans of patients with anorexia nervosa (AN), reductions in brain volume are often apparent. However, it is unknown whether such brain abnormalities are influenced by genetic determinants that partially overlap with those underlying AN. Here, we used a battery of methods (LD score regression, genetic risk scores, sign test, SNP effect concordance analysis, and Mendelian randomization) to investigate the genetic covariation between subcortical brain volumes and risk for AN based on summary measures retrieved from genome-wide association studies of regional brain volumes (ENIGMA consortium, n = 13,170) and genetic risk for AN (PGC-ED consortium, n = 14,477). Genetic correlations ranged from - 0.10 to 0.23 (all p > 0.05). There were some signs of an inverse concordance between greater thalamus volume and risk for AN (permuted p = 0.009, 95% CI: [0.005, 0.017]). A genetic variant in the vicinity of ZW10, a gene involved in cell division, and neurotransmitter and immune system relevant genes, in particular DRD2, was significantly associated with AN only after conditioning on its association with caudate volume (pFDR = 0.025). Another genetic variant linked to LRRC4C, important in axonal and synaptic development, reached significance after conditioning on hippocampal volume (pFDR = 0.021). In this comprehensive set of analyses and based on the largest available sample sizes to date, there was weak evidence for associations between risk for AN and risk for abnormal subcortical brain volumes at a global level (that is, common variant genetic architecture), but suggestive evidence for effects of single genetic markers. Highly powered multimodal brain- and disorder-related genome-wide studies are needed to further dissect the shared genetic influences on brain structure and risk for AN.Entities:
Keywords: Anorexia nervosa; Brain structure; Genetic correlation
Mesh:
Year: 2018 PMID: 30519816 PMCID: PMC6647452 DOI: 10.1007/s12035-018-1439-4
Source DB: PubMed Journal: Mol Neurobiol ISSN: 0893-7648 Impact factor: 5.590
Genetic overlap analyses between anorexia nervosa (AN) and seven subcortical brain volumes
| ROI | LDSC | GRSa | Sign testa | SECA | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Volume | h2 in % | 95% CI | rg | se | p(rg) | R2 | p(GRS) | p threshold (brain volume) | Estimateb | 95% CI | p(binomial) | p threshold (brain volume) | p(pleiotropy) | p(concordance) |
| Caudate | 25.65 | [17.61,33.69] | 0.14 | 0.11 | 0.19 | 9.55E-05 | 0.120 | 1E-04 | 0.513 | [0.49,0.535] | 0.268 | 1E-02 | 1.000 | 1.000 |
| Hippocampus | 14.86 | [6.61,23.11] | − 0.06 | 0.15 | 0.66 | 3.42E-04 | 0.013c | 1E-02 | 0.522 | [0.499,0.544] | 0.061 | 1E-02 | 1.000 | 0.138 |
| Nucleus accumbens | 8.93 | [0.76,17.1] | 0.14 | 0.19 | 0.45 | 1.43E-04 | 0.075 | 1E-03 | 0.450 | [0.384,0.518] | 0.159 | 1E-03 | 0.057 | 0.052 |
| Pallidum | 15.25 | [6.84,23.66] | 0.10 | 0.14 | 0.47 | 2.65E-04 | 0.025c | 1E-02 | 0.522 | [0.499,0.545] | 0.065 | 1E-02 | 1.000 | 0.311 |
| Putamen | 30.80 | [20.78,40.82] | 0.05 | 0.10 | 0.61 | 1.26E-04 | 0.089 | 1E-04 | 0.438 | [0.374,0.503] | 0.061 | 1E-03 | 0.153 | 0.170 |
| Thalamus | 13.74 | [5.78,21.7] | − 0.10 | 0.15 | 0.49 | 2.23E-04 | 0.036c | 5E-02 | 0.512 | [0.502,0.523] | 0.019d | 5E-02 | 0.160 | 0.009c,d |
| ICV | 17.96 | [8.59,27.33] | 0.23 | 0.14 | 0.10 | 3.28E-04 | 0.015c | 1E-03 | 0.560 | [0.495,0.623] | 0.072 | 1E-03 | 1.000 | 0.078 |
ROI, region of interest; ICV, intracranial volume; LDSC, LD score regression; GRS, genetic risk score; SECA, SNP effect concordance analysis; amygdala volume was omitted from the analyses because of low heritability; heritability estimates on the observed scale; rg = genetic correlation with AN; p(rg) = p value of the genetic correlation; se = standard error; CI = confidence interval; a tests were carried out on subsets of four different thresholds (1*10−4, 1*10−3, 1*10−2, 5*10−2) in the discovery dataset (i.e., ENIGMA subcortical brain volume), but only the strongest results are reported in the table. For detailed results, see Tables S3 and S4. b An estimate > 0.5 indicates a higher-than-chance proportion of SNPs with a risk effect on brain volume (BETA<0) and on AN (OR > 1); c nominally significant at p < 0.05; d trend significance after Bonferroni-correction for 7 tests (number of brain volumes)
Fig. 1a Genetic risk score analysis results for four subcortical brain volumes with nominally significant results. p value criteria used to threshold ENIGMA input data are plotted on the x-axis, the amount of variance of AN liability explained (R2) on the y-axis. The color bar indicates the level of significance for a GRS effect on AN. b SECA analysis indicated significant concordance effects between AN (x-axis) and thalamus volume (y-axis). For computational purposes, ORAN was inversely coded, so that red indicates concordance of SNP effects between increased risk for AN and lower thalamus volume