| Literature DB >> 30519332 |
Meng Wang1, Xinghan Liu2, Shuai Lin1, Tian Tian1, Feng Guan3, Yan Guo4, Xiao Li5, Yujiao Deng1, Yi Zheng1, Peng Xu1, Qian Hao1, Zhen Zhai1, Zhijun Dai1.
Abstract
Purpose: Single nucleotide variations in the liver fatty acid binding protein (L-FABP, FABP1) gene lead to changes in cellular signaling pathways and lipid metabolism. FABP1 polymorphisms were associated with some liver diseases, like steatotic hepatocellular carcinoma. However, the association between FABP1 rs1545224 and rs2241883 polymorphisms and hepatitis B virus-related liver cirrhosis (LC) and hepatocellular carcinoma (HCC) has not been reported. We performed this study to explore their relationship.Entities:
Keywords: FABP1; hepatocellular carcinoma; liver cirrhosis; polymorphism
Year: 2018 PMID: 30519332 PMCID: PMC6277622 DOI: 10.7150/jca.27301
Source DB: PubMed Journal: J Cancer ISSN: 1837-9664 Impact factor: 4.207
Primers used in this study
| SNP_ID | 1st-PCRP | 2nd-PCRP | UEP_SEQ |
|---|---|---|---|
| rs1545224 | ACGTTGGATGGCACTTACTGAGGATCCATC | ACGTTGGATGTCTGTGGCTGGTTGGTTGC | CGCTGAGCAGAAAGG |
| rs2241883 | ACGTTGGATGGACAGTGGTTCAGTTGGAAG | ACGTTGGATGGTGATTATGTCGCCGTTGAG | TAACAGACTTGATGTTTTTGAAAG |
Characteristics of including subjects
| Characteristics | Healthy controls | CHB | CHB-related LC | CHB-related HCC | |
|---|---|---|---|---|---|
| 250 | 250 | 250 | 250 | ||
| 55.71±9.17 | 54.17±10.37 | 53.12±10.58 | 54.47±12.00 | 0.056 | |
| Male | 201 | 182 | 177 | 194 | 0.051 |
| Female | 49 | 68 | 73 | 56 | |
| yes | 22 | 53 | 39 | 42 | |
| no | 228 | 197 | 211 | 208 | |
| yes | 145 | 137 | 118 | 131 | 0.100 |
| no | 105 | 113 | 132 | 119 | |
| Yes | 22 | 30 | 39 | 44 | |
| no | 228 | 220 | 211 | 206 | |
| Yes | 8 | 7 | 12 | 10 | 0.647 |
| No | 242 | 243 | 238 | 240 | |
| T-Bil level (umol/L) | 8.49±4.09 | 14.35±5.29 | 39.22±11.58 | 36.76±10.11 | |
| ALT (U/L) | 15.36±5.27 | 65.33±13.40 | 63.84±21.26 | 71.03±16.50 | |
| AST (U/L) | 12.35±4.05 | 49.62±15.16 | 47.99±24.83 | 58.21±17.55 | |
| AFP (ng/ml) | No data | 7.94±3.31 | 43.43±29.46 | 1629.59±625.28 | |
| Number of patients with AFP ≤400 ng/ml | - | - | - | 156 | |
CHB, chronic hepatitis B; LC, liver cirrhosis; HCC, hepatocellular carcinoma; ALT, alanine transaminase; AST, aspartate aminotransferase; AFP, alpha-fetoprotein.
Allele and genotype distributions of rs1545224 and rs2241883 polymorphisms in health controls, CHB, LC and HCC patients
| Model | Control (n, %) | CHB (n, %) | LC (n, %) | HCC (n, %) | |
|---|---|---|---|---|---|
| Allele | G | 266 (53.2%) | 265 (53.2%) | 284 (56.8%) | 249 (49.8%) |
| A | 234 (46.8%) | 233 (46.8%) | 216 (43.2%) | 251 (50.3%) | |
| Codominant model | GG | 76 (30.4%) | 74 (29.7%) | 84 (33.6%) | 59 (23.6%) |
| AG | 114 (45.6%) | 117 (47.0%) | 116 (46.4%) | 131 (52.4%) | |
| AA | 60 (24.0%) | 58 (23.3%) | 50 (20%) | 60 (24.0%) | |
| Dominant model | GG | 76 (30.4%) | 74 (29.7%) | 84 (33.6%) | 59 (23.6%) |
| AG+AA | 174 (69.6%) | 175 (70.3%) | 166 (66.4%) | 191 (76.4%) | |
| Recessive model | AG+GG | 190 (76.0%) | 191 (76.7%) | 200 (80%) | 190 (76.0%) |
| AA | 60 (24.0%) | 58 (23.3%) | 50 (20%) | 60 (24.0%) | |
| Allele | T | 384 (77.4%) | 393 (78.6%) | 407 (81.4%) | 389 (78.1%) |
| C | 112 (22.6%) | 107 (21.4%) | 93 (18.6%) | 109 (21.9%) | |
| Codominant model | TT | 149 (60.1%) | 153 (61.2%) | 165 (66.0%) | 155 (62.3%) |
| CT | 86 (34.7%) | 87 (34.8%) | 77 (30.8%) | 79 (31.7%) | |
| CC | 13 (5.2%) | 10 (4.0%) | 8 (3.2%) | 15 (6.0%) | |
| Dominant model | TT | 149 (60.1%) | 153 (61.2%) | 165 (66.0%) | 155 (62.3%) |
| CT+CC | 99 (39.9%) | 97 (38.8%) | 85 (34.0%) | 94 (37.7%) | |
| Recessive model | CT+TT | 235 (94.8%) | 240 (96.0%) | 242 (96.8%) | 234 (94.0%) |
| CC | 13 (5.2%) | 10 (4.0%) | 8 (3.2%) | 15 (6.0%) | |
HWE = hardy-weinberg equilibrium, CHB = chronic hepatitis B, LC = liver cirrhosis, HCC = hepatocellular carcinoma.
Association between FABP1 polymorphisms and LC and HCC risk
| Model | LC vs. Controls | HCC vs. Controls | LC vs. CHB | HCC vs. CHB | HCC vs. LC | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Rs1545224 | OR | P | OR | P | OR | P | OR | P | OR | P |
| G | 1ref | 0.25 | 1ref | 0.28 | 1ref | 0.25 | 1ref | 0.28 | 1ref | |
| A | 0.86 (0.67-1.11) | 1.15 | 0.87 | 1.15 | 1.33 (1.03-1.79) | |||||
| GG | 1ref | 1ref | 1ref | 1ref | 1ref | |||||
| AG | 0.92 (0.61-1.38) | 0.69 | 1.48 | 0.07 | 0.87 | 0.51 | 1.40 | 0.12 | 1.61 (1.06-2.44) | |
| AA | 0.75 (0.46-1.23) | 0.26 | 1.29 | 0.31 | 0.76 | 0.27 | 1.30 | 0.30 | 1.71 | |
| GG | 1ref | 0.44 | 1ref | 0.09 | 1ref | 0.35 | 1ref | 0.12 | 1ref | |
| AG+AA | 0.86 (0.59-1.26) | 1.41 (0.95-2.10) | 0.84 (0.57-1.22) | 1.37 (0.92-2.04) | 1.64 (1.11-2.43) | |||||
| AG+GG | 1ref | 0.28 | 1ref | 1 | 1ref | 0.37 | 1ref | 0.85 | 1ref | 0.28 |
| AA | 0.79 (0.52-1.21) | 1 (0.66-1.51) | 0.82 (0.54-1.26) | 1.04 (0.69-1.57) | 1.26 (0.83-1.93) | |||||
| Allele | ||||||||||
| T | 1ref | 0.12 | 1ref | 0.79 | 1ref | 0.27 | 1ref | 0.85 | 1ref | 0.20 |
| C | 0.78 (0.58-1.07) | 0.96 (0.71-1.30) | 0.84 (0.62-1.14) | 1.03 (0.76-1.39) | 1.23 (0.90-1.67) | |||||
| TT | 1ref | 1ref | 1ref | 1ref | 1ref | |||||
| CT | 0.81 (0.55-1.18) | 0.27 | 0.88 (0.60-1.29) | 0.52 | 0.82 (0.56-1.20) | 0.30 | 0.90 (0.61-1.31) | 0.57 | 1.09 | 0.65 |
| CC | 0.56 (0.22-1.38) | 0.20 | 1.11 (0.51-2.41) | 0.79 | 0.72 (0.29-1.93) | 0.54 | 1.48 (0.65-3.40) | 0.35 | 2.00 | 0.12 |
| TT | 1ref | 0.17 | 1ref | 0.62 | 1ref | 0.26 | 1ref | 0.81 | 1ref | 0.38 |
| CT+CC | 0.78 (0.533-1.12) | 0.91 (0.64-1.31) | 0.81 (0.56-1.17) | 0.96 (0.67-1.37) | 1.18 (0.82-1.70) | |||||
| CT+TT | 1ref | 0.26 | 1ref | 0.71 | 1ref | 0.63 | 1ref | 0.30 | 1ref | 0.13 |
| CC | 0.60 (0.24-1.47) | 1.16 (0.54-2.49) | 0.79 (0.31-2.04) | 1.54 (0.68-3.49) | 1.23 (0.81-4.66) | |||||
CHB, chronic hepatitis B; LC, liver cirrhosis; HCC, hepatocellular carcinoma; OR, odd ratio; 95%CI, 95% confidence interval
Association between FABP1 polymorphisms and LC and HCC risk adjusted by gender, age, smoking and drinking
| Model | LC vs. Controls | HCC vs. Controls | LC vs. CHB | HCC vs. CHB | HCC vs. LC | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rs1545224 | OR* | P* | OR* | P* | OR* | P* | OR* | P* | OR* | P* | ||
| G | 1ref | 0.81 | 1ref | 0.32 | 1ref | 0.42 | 1ref | 0.35 | 1ref | 0.07 | ||
| A | 0.96 (0.71-1.31) | 1.17 (0.86-1.59) | 0.90 (0.69-1.17) | 1.16 (0.85-1.58) | 1.30 (0.98-1.72) | |||||||
| GG | 1ref | 1ref | 1ref | 1ref | 1ref | |||||||
| AG | 0.89 (0.54-1.48) | 0.66 | 1.23 (0.73-2.08) | 0.43 | 0.99 (0.64-1.55) | 0.97 | 1.68 (0.99-2.85) | 0.05 | 1.57 (0.99-2.49) | 0.06 | ||
| AA | 0.94 (0.51-1.75) | 0.86 | 1.36 (0.73-2.52) | 0.33 | 0.79 (0.46-1.36) | 0.39 | 1.32 (0.71-2.45) | 0.39 | 1.63 (0.93-2.85) | 0.09 | ||
| GG | 1ref | 0.69 | 1ref | 0.34 | 1ref | 0.70 | 1ref | 0.08 | 1ref | |||
| AG+AA | 0.91 (0.57-1.45) | 1.27 (0.78-2.08) | 0.92 (0.61-1.40) | 1.55 (0.94-2.55) | 1.59 (1.03-2.46) | |||||||
| AG+GG | 1ref | 0.98 | 1ref | 0.52 | 1ref | 0.33 | 1ref | 0.81 | 1ref | 0.41 | ||
| AA | 1.01 (0.58-1.74) | 1.19 (0.71-1.99) | 0.79 (0.49-1.27) | 0.94 (0.56-1.57) | 1.22 (0.76-1.97) | |||||||
| T | 1ref | 0.40 | 1ref | 0.31 | 1ref | 0.44 | 1ref | 0.90 | 1ref | 0.30 | ||
| C | 0.85 (0.58-1.25) | 0.83 (0.57-1.20) | 0.87 (0.62-1.23) | 1.03 (0.71-1.49) | 1.20 (0.86-1.67) | |||||||
| TT | 1ref | 1ref | 1ref | 1ref | 1ref | |||||||
| CT | 0.8 (0.54-1.43) | 0.61 | 0.81 (0.51-1.30) | 0.38 | 0.83 (0.55-1.26) | 0.38 | 0.87 (0.54-1.41) | 0.57 | 1.07 (0.70-1.64) | 0.75 | ||
| CC | 0.65 (0.22-1.94) | 0.44 | 0.72 (0.27-1.92) | 0.51 | 0.89 (0.33-2.44) | 0.82 | 1.50 (0.55-4.09) | 0.43 | 1.85 (0.72-4.76) | 0.20 | ||
| TT | 1ref | 0.48 | 1ref | 0.32 | 1ref | 0.39 | 1ref | 0.79 | 1ref | 0.49 | ||
| CT+CC | 0.85 (0.53-1.35) | 0.80 (0.51-1.25) | 0.84 (0.56-1.25) | 0.94 (0.60-1.48) | 1.16 (0.77-1.73) | |||||||
| CT+TT | 1ref | 0.48 | 1ref | 0.61 | 1ref | 0.92 | 1ref | 0.37 | 1ref | 0.21 | ||
| CC | 0.68 (0.23-2.00) | 0.77 (0.29-2.04) | 0.95 (0.35-2.57) | 1.58 (0.59-4.24) | 1.81 (0.71-4.60) | |||||||
CHB, chronic hepatitis B; LC, liver cirrhosis; HCC, hepatocellular carcinoma; OR, odd ratio; 95%CI, 95% confidence interval; OR*, OR values adjusted by gender, age, smoking and drinking; P*, P values adjusted by gender, age, smoking and drinking.