Literature DB >> 30473607

Improving malignancy prediction through feature selection informed by nodule size ranges in NLST.

Dmitry Cherezov1, Samuel Hawkins1, Dmitry Goldgof1, Lawrence Hall1, Yoganand Balagurunathan2, Robert J Gillies2, Matthew B Schabath3.   

Abstract

Computed tomography (CT) is widely used during diagnosis and treatment of Non-Small Cell Lung Cancer (NSCLC). Current computer-aided diagnosis (CAD) models, designed for the classification of malignant and benign nodules, use image features, selected by feature selectors, for making a decision. In this paper, we investigate automated selection of different image features informed by different nodule size ranges to increase the overall accuracy of the classification. The NLST dataset is one of the largest available datasets on CT screening for NSCLC. We used 261 cases as a training dataset and 237 cases as a test dataset. The nodule size, which may indicate biological variability, can vary substantially. For example, in the training set, there are nodules with a diameter of a couple millimeters up to a couple dozen millimeters. The premise is that benign and malignant nodules have different radiomic quantitative descriptors related to size. After splitting training and testing datasets into three subsets based on the longest nodule diameter (LD) parameter accuracy was improved from 74.68% to 81.01% and the AUC improved from 0.69 to 0.79. We show that if AUC is the main factor in choosing parameters then accuracy improved from 72.57% to 77.5% and AUC improved from 0.78 to 0.82. Additionally, we show the impact of an oversampling technique for the minority cancer class. In some particular cases from 0.82 to 0.87.

Entities:  

Year:  2017        PMID: 30473607      PMCID: PMC6251413          DOI: 10.1109/SMC.2016.7844523

Source DB:  PubMed          Journal:  Conf Proc IEEE Int Conf Syst Man Cybern        ISSN: 1062-922X


  9 in total

1.  Computer-aided diagnosis of pulmonary nodules using a two-step approach for feature selection and classifier ensemble construction.

Authors:  Michael C Lee; Lilla Boroczky; Kivilcim Sungur-Stasik; Aaron D Cann; Alain C Borczuk; Steven M Kawut; Charles A Powell
Journal:  Artif Intell Med       Date:  2010-05-31       Impact factor: 5.326

2.  Computer-aided diagnosis of pulmonary nodules on CT scans: segmentation and classification using 3D active contours.

Authors:  Ted W Way; Lubomir M Hadjiiski; Berkman Sahiner; Heang-Ping Chan; Philip N Cascade; Ella A Kazerooni; Naama Bogot; Chuan Zhou
Journal:  Med Phys       Date:  2006-07       Impact factor: 4.071

3.  Feature selection and performance evaluation of support vector machine (SVM)-based classifier for differentiating benign and malignant pulmonary nodules by computed tomography.

Authors:  Yanjie Zhu; Yongqiang Tan; Yanqing Hua; Mingpeng Wang; Guozhen Zhang; Jianguo Zhang
Journal:  J Digit Imaging       Date:  2009-02-26       Impact factor: 4.056

4.  A novel approach to nodule feature optimization on thin section thoracic CT.

Authors:  Ravi Samala; Wilfrido Moreno; Yuncheng You; Wei Qian
Journal:  Acad Radiol       Date:  2009-04       Impact factor: 3.173

5.  The meaning and use of the area under a receiver operating characteristic (ROC) curve.

Authors:  J A Hanley; B J McNeil
Journal:  Radiology       Date:  1982-04       Impact factor: 11.105

Review 6.  Radiomics: the process and the challenges.

Authors:  Virendra Kumar; Yuhua Gu; Satrajit Basu; Anders Berglund; Steven A Eschrich; Matthew B Schabath; Kenneth Forster; Hugo J W L Aerts; Andre Dekker; David Fenstermacher; Dmitry B Goldgof; Lawrence O Hall; Philippe Lambin; Yoganand Balagurunathan; Robert A Gatenby; Robert J Gillies
Journal:  Magn Reson Imaging       Date:  2012-08-13       Impact factor: 2.546

7.  Reproducibility and Prognosis of Quantitative Features Extracted from CT Images.

Authors:  Yoganand Balagurunathan; Yuhua Gu; Hua Wang; Virendra Kumar; Olya Grove; Sam Hawkins; Jongphil Kim; Dmitry B Goldgof; Lawrence O Hall; Robert A Gatenby; Robert J Gillies
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

8.  Texture analysis of non-small cell lung cancer on unenhanced computed tomography: initial evidence for a relationship with tumour glucose metabolism and stage.

Authors:  Balaji Ganeshan; Sandra Abaleke; Rupert C D Young; Christopher R Chatwin; Kenneth A Miles
Journal:  Cancer Imaging       Date:  2010-07-06       Impact factor: 3.909

9.  Fractal analysis of internal and peripheral textures of small peripheral bronchogenic carcinomas in thin-section computed tomography: comparison of bronchioloalveolar cell carcinomas with nonbronchioloalveolar cell carcinomas.

Authors:  Shoji Kido; Keiko Kuriyama; Masahiko Higashiyama; Tsutomu Kasugai; Chikazumi Kuroda
Journal:  J Comput Assist Tomogr       Date:  2003 Jan-Feb       Impact factor: 1.826

  9 in total
  2 in total

1.  Hybrid models for lung nodule malignancy prediction utilizing convolutional neural network ensembles and clinical data.

Authors:  Rahul Paul; Matthew B Schabath; Robert Gillies; Lawrence O Hall; Dmitry B Goldgof
Journal:  J Med Imaging (Bellingham)       Date:  2020-04-06

2.  Revealing Tumor Habitats from Texture Heterogeneity Analysis for Classification of Lung Cancer Malignancy and Aggressiveness.

Authors:  Dmitry Cherezov; Dmitry Goldgof; Lawrence Hall; Robert Gillies; Matthew Schabath; Henning Müller; Adrien Depeursinge
Journal:  Sci Rep       Date:  2019-03-14       Impact factor: 4.379

  2 in total

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