Literature DB >> 22898692

Radiomics: the process and the challenges.

Virendra Kumar1, Yuhua Gu, Satrajit Basu, Anders Berglund, Steven A Eschrich, Matthew B Schabath, Kenneth Forster, Hugo J W L Aerts, Andre Dekker, David Fenstermacher, Dmitry B Goldgof, Lawrence O Hall, Philippe Lambin, Yoganand Balagurunathan, Robert A Gatenby, Robert J Gillies.   

Abstract

"Radiomics" refers to the extraction and analysis of large amounts of advanced quantitative imaging features with high throughput from medical images obtained with computed tomography, positron emission tomography or magnetic resonance imaging. Importantly, these data are designed to be extracted from standard-of-care images, leading to a very large potential subject pool. Radiomics data are in a mineable form that can be used to build descriptive and predictive models relating image features to phenotypes or gene-protein signatures. The core hypothesis of radiomics is that these models, which can include biological or medical data, can provide valuable diagnostic, prognostic or predictive information. The radiomics enterprise can be divided into distinct processes, each with its own challenges that need to be overcome: (a) image acquisition and reconstruction, (b) image segmentation and rendering, (c) feature extraction and feature qualification and (d) databases and data sharing for eventual (e) ad hoc informatics analyses. Each of these individual processes poses unique challenges. For example, optimum protocols for image acquisition and reconstruction have to be identified and harmonized. Also, segmentations have to be robust and involve minimal operator input. Features have to be generated that robustly reflect the complexity of the individual volumes, but cannot be overly complex or redundant. Furthermore, informatics databases that allow incorporation of image features and image annotations, along with medical and genetic data, have to be generated. Finally, the statistical approaches to analyze these data have to be optimized, as radiomics is not a mature field of study. Each of these processes will be discussed in turn, as well as some of their unique challenges and proposed approaches to solve them. The focus of this article will be on images of non-small-cell lung cancer.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22898692      PMCID: PMC3563280          DOI: 10.1016/j.mri.2012.06.010

Source DB:  PubMed          Journal:  Magn Reson Imaging        ISSN: 0730-725X            Impact factor:   2.546


  59 in total

1.  Mapping LIDC, RadLex™, and lung nodule image features.

Authors:  Pia Opulencia; David S Channin; Daniela S Raicu; Jacob D Furst
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Review 2.  A review of methods of analysis in contouring studies for radiation oncology.

Authors:  Michael G Jameson; Lois C Holloway; Philip J Vial; Shalini K Vinod; Peter E Metcalfe
Journal:  J Med Imaging Radiat Oncol       Date:  2010-10       Impact factor: 1.735

Review 3.  Texture analysis of medical images.

Authors:  G Castellano; L Bonilha; L M Li; F Cendes
Journal:  Clin Radiol       Date:  2004-12       Impact factor: 2.350

4.  An evaluation of the variability of tumor-shape definition derived by experienced observers from CT images of supraglottic carcinomas (ACRIN protocol 6658).

Authors:  Jay S Cooper; Suresh K Mukherji; Alicia Y Toledano; Clifford Beldon; Ilona M Schmalfuss; Robert Amdur; Scott Sailer; Laurie A Loevner; Phil Kousouboris; K Kian Ang; Jean Cormack; JoRean Sicks
Journal:  Int J Radiat Oncol Biol Phys       Date:  2007-01-08       Impact factor: 7.038

Review 5.  Standards for PET image acquisition and quantitative data analysis.

Authors:  Ronald Boellaard
Journal:  J Nucl Med       Date:  2009-04-20       Impact factor: 10.057

6.  The Annotation and Image Mark-up project.

Authors:  David S Channin; Pattanasak Mongkolwat; Vladimir Kleper; Daniel L Rubin
Journal:  Radiology       Date:  2009-12       Impact factor: 11.105

7.  Molecular staging for survival prediction of colorectal cancer patients.

Authors:  Steven Eschrich; Ivana Yang; Greg Bloom; Ka Yin Kwong; David Boulware; Alan Cantor; Domenico Coppola; Mogens Kruhøffer; Lauri Aaltonen; Torben F Orntoft; John Quackenbush; Timothy J Yeatman
Journal:  J Clin Oncol       Date:  2005-05-20       Impact factor: 44.544

8.  Comparison of quantitative parameters in cervix cancer measured by dynamic contrast-enhanced MRI and CT.

Authors:  Cheng Yang; Walter M Stadler; Gregory S Karczmar; Michael Milosevic; Ivan Yeung; Masoom A Haider
Journal:  Magn Reson Med       Date:  2010-06       Impact factor: 4.668

9.  Identification of noninvasive imaging surrogates for brain tumor gene-expression modules.

Authors:  Maximilian Diehn; Christine Nardini; David S Wang; Susan McGovern; Mahesh Jayaraman; Yu Liang; Kenneth Aldape; Soonmee Cha; Michael D Kuo
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-24       Impact factor: 11.205

10.  Feasibility of pathology-correlated lung imaging for accurate target definition of lung tumors.

Authors:  Joep Stroom; Hans Blaauwgeers; Angela van Baardwijk; Liesbeth Boersma; Joos Lebesque; Jacqueline Theuws; Robert-Jan van Suylen; Houke Klomp; Koen Liesker; Renée van Pel; Christian Siedschlag; Kenneth Gilhuijs
Journal:  Int J Radiat Oncol Biol Phys       Date:  2007-09-01       Impact factor: 7.038

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  620 in total

1.  Prognostic value of computed tomography radiomics features in patients with gastric cancer following curative resection.

Authors:  Wuchao Li; Liwen Zhang; Chong Tian; Hui Song; Mengjie Fang; Chaoen Hu; Yali Zang; Ying Cao; Shiyuan Dai; Fang Wang; Di Dong; Rongpin Wang; Jie Tian
Journal:  Eur Radiol       Date:  2018-12-05       Impact factor: 5.315

2.  Noninvasive Quantitative Imaging-based Biomarkers and Lung Cancer Screening.

Authors:  Matthew B Schabath; Robert J Gillies
Journal:  Am J Respir Crit Care Med       Date:  2015-09-15       Impact factor: 21.405

3.  Imaging texture analysis for automated prediction of lung cancer recurrence after stereotactic radiotherapy.

Authors:  Sarah A Mattonen; Shyama Tetar; David A Palma; Alexander V Louie; Suresh Senan; Aaron D Ward
Journal:  J Med Imaging (Bellingham)       Date:  2015-11-12

4.  Special Section Guest Editorial:Radiomics and Imaging Genomics: Quantitative Imaging for Precision Medicine.

Authors:  Sandy Napel; Maryellen Giger
Journal:  J Med Imaging (Bellingham)       Date:  2015-12-11

5.  Developing Predictive or Prognostic Biomarkers for Charged Particle Radiotherapy.

Authors:  Michael D Story; Jing Wang
Journal:  Int J Part Ther       Date:  2018

Review 6.  Radiomics in precision medicine for lung cancer.

Authors:  Julie Constanzo; Lise Wei; Huan-Hsin Tseng; Issam El Naqa
Journal:  Transl Lung Cancer Res       Date:  2017-12

Review 7.  An Update on the Approach to the Imaging of Brain Tumors.

Authors:  Katherine M Mullen; Raymond Y Huang
Journal:  Curr Neurol Neurosci Rep       Date:  2017-07       Impact factor: 5.081

8.  High quality machine-robust image features: identification in nonsmall cell lung cancer computed tomography images.

Authors:  Luke A Hunter; Shane Krafft; Francesco Stingo; Haesun Choi; Mary K Martel; Stephen F Kry; Laurence E Court
Journal:  Med Phys       Date:  2013-12       Impact factor: 4.071

9.  Quantitative tumor segmentation for evaluation of extent of glioblastoma resection to facilitate multisite clinical trials.

Authors:  James S Cordova; Eduard Schreibmann; Costas G Hadjipanayis; Ying Guo; Hui-Kuo G Shu; Hyunsuk Shim; Chad A Holder
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

10.  Stability of FDG-PET Radiomics features: an integrated analysis of test-retest and inter-observer variability.

Authors:  Ralph T H Leijenaar; Sara Carvalho; Emmanuel Rios Velazquez; Wouter J C van Elmpt; Chintan Parmar; Otto S Hoekstra; Corneline J Hoekstra; Ronald Boellaard; André L A J Dekker; Robert J Gillies; Hugo J W L Aerts; Philippe Lambin
Journal:  Acta Oncol       Date:  2013-09-09       Impact factor: 4.089

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