Literature DB >> 16898434

Computer-aided diagnosis of pulmonary nodules on CT scans: segmentation and classification using 3D active contours.

Ted W Way1, Lubomir M Hadjiiski, Berkman Sahiner, Heang-Ping Chan, Philip N Cascade, Ella A Kazerooni, Naama Bogot, Chuan Zhou.   

Abstract

We are developing a computer-aided diagnosis (CAD) system to classify malignant and benign lung nodules found on CT scans. A fully automated system was designed to segment the nodule from its surrounding structured background in a local volume of interest (VOI) and to extract image features for classification. Image segmentation was performed with a three-dimensional (3D) active contour (AC) method. A data set of 96 lung nodules (44 malignant, 52 benign) from 58 patients was used in this study. The 3D AC model is based on two-dimensional AC with the addition of three new energy components to take advantage of 3D information: (1) 3D gradient, which guides the active contour to seek the object surface, (2) 3D curvature, which imposes a smoothness constraint in the z direction, and (3) mask energy, which penalizes contours that grow beyond the pleura or thoracic wall. The search for the best energy weights in the 3D AC model was guided by a simplex optimization method. Morphological and gray-level features were extracted from the segmented nodule. The rubber band straightening transform (RBST) was applied to the shell of voxels surrounding the nodule. Texture features based on run-length statistics were extracted from the RBST image. A linear discriminant analysis classifier with stepwise feature selection was designed using a second simplex optimization to select the most effective features. Leave-one-case-out resampling was used to train and test the CAD system. The system achieved a test area under the receiver operating characteristic curve (A(z)) of 0.83 +/- 0.04. Our preliminary results indicate that use of the 3D AC model and the 3D texture features surrounding the nodule is a promising approach to the segmentation and classification of lung nodules with CAD. The segmentation performance of the 3D AC model trained with our data set was evaluated with 23 nodules available in the Lung Image Database Consortium (LIDC). The lung nodule volumes segmented by the 3D AC model for best classification were generally larger than those outlined by the LIDC radiologists using visual judgment of nodule boundaries.

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Year:  2006        PMID: 16898434      PMCID: PMC2728558          DOI: 10.1118/1.2207129

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  46 in total

Review 1.  Solitary pulmonary nodules: Part I. Morphologic evaluation for differentiation of benign and malignant lesions.

Authors:  J J Erasmus; J E Connolly; H P McAdams; V L Roggli
Journal:  Radiographics       Date:  2000 Jan-Feb       Impact factor: 5.333

2.  Computer-aided characterization of mammographic masses: accuracy of mass segmentation and its effects on characterization.

Authors:  B Sahiner; N Petrick; H P Chan; L M Hadjiiski; C Paramagul; M A Helvie; M N Gurcan
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

3.  Lung nodule detection on thoracic computed tomography images: preliminary evaluation of a computer-aided diagnosis system.

Authors:  Metin N Gurcan; Berkman Sahiner; Nicholas Petrick; Heang-Ping Chan; Ella A Kazerooni; Philip N Cascade; Lubomir Hadjiiski
Journal:  Med Phys       Date:  2002-11       Impact factor: 4.071

4.  Lung cancer: performance of automated lung nodule detection applied to cancers missed in a CT screening program.

Authors:  Samuel G Armato; Feng Li; Maryellen L Giger; Heber MacMahon; Shusuke Sone; Kunio Doi
Journal:  Radiology       Date:  2002-12       Impact factor: 11.105

5.  Lung micronodules: automated method for detection at thin-section CT--initial experience.

Authors:  Matthew S Brown; Jonathan G Goldin; Robert D Suh; Michael F McNitt-Gray; James W Sayre; Denise R Aberle
Journal:  Radiology       Date:  2003-01       Impact factor: 11.105

6.  Lung nodule enhancement at CT: multicenter study.

Authors:  S J Swensen; R W Viggiano; D E Midthun; N L Müller; A Sherrick; K Yamashita; D P Naidich; E F Patz; T E Hartman; J R Muhm; A L Weaver
Journal:  Radiology       Date:  2000-01       Impact factor: 11.105

7.  Patient-specific models for lung nodule detection and surveillance in CT images.

Authors:  M S Brown; M F McNitt-Gray; J G Goldin; R D Suh; J W Sayre; D R Aberle
Journal:  IEEE Trans Med Imaging       Date:  2001-12       Impact factor: 10.048

8.  Screening for early lung cancer with low-dose spiral CT: prevalence in 817 asymptomatic smokers.

Authors:  Stefan Diederich; Dag Wormanns; Michael Semik; Michael Thomas; Horst Lenzen; Nikolaus Roos; Walter Heindel
Journal:  Radiology       Date:  2002-03       Impact factor: 11.105

9.  Lung cancer screening using low-dose spiral CT: results of baseline and 1-year follow-up studies.

Authors:  Takeshi Nawa; Tohru Nakagawa; Suzushi Kusano; Yoshimichi Kawasaki; Youichi Sugawara; Hajime Nakata
Journal:  Chest       Date:  2002-07       Impact factor: 9.410

10.  The solitary pulmonary nodule.

Authors:  Bethany B Tan; Kevin R Flaherty; Ella A Kazerooni; Mark D Iannettoni
Journal:  Chest       Date:  2003-01       Impact factor: 9.410

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  69 in total

1.  Fast lung nodule detection in chest CT images using cylindrical nodule-enhancement filter.

Authors:  Atsushi Teramoto; Hiroshi Fujita
Journal:  Int J Comput Assist Radiol Surg       Date:  2012-06-09       Impact factor: 2.924

2.  Computerized comprehensive data analysis of lung imaging database consortium (LIDC).

Authors:  Jun Tan; Jiantao Pu; Bin Zheng; Xingwei Wang; Joseph K Leader
Journal:  Med Phys       Date:  2010-07       Impact factor: 4.071

3.  Shape "break-and-repair" strategy and its application to automated medical image segmentation.

Authors:  Jiantao Pu; David S Paik; Xin Meng; Justus E Roos; Geoffrey D Rubin
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-01       Impact factor: 4.579

4.  A Combination of Shape and Texture Features for Classification of Pulmonary Nodules in Lung CT Images.

Authors:  Ashis Kumar Dhara; Sudipta Mukhopadhyay; Anirvan Dutta; Mandeep Garg; Niranjan Khandelwal
Journal:  J Digit Imaging       Date:  2016-08       Impact factor: 4.056

Review 5.  Update in lung cancer 2006.

Authors:  Sarita Dubey; Charles A Powell
Journal:  Am J Respir Crit Care Med       Date:  2007-05-01       Impact factor: 21.405

6.  Effect of CT scanning parameters on volumetric measurements of pulmonary nodules by 3D active contour segmentation: a phantom study.

Authors:  Ted W Way; Heang-Ping Chan; Mitchell M Goodsitt; Berkman Sahiner; Lubomir M Hadjiiski; Chuan Zhou; Aamer Chughtai
Journal:  Phys Med Biol       Date:  2008-02-13       Impact factor: 3.609

7.  Pulmonary nodule registration in serial CT scans based on rib anatomy and nodule template matching.

Authors:  Jiazheng Shi; Berkman Sahiner; Heang-Ping Chan; Lubomir Hadjiiski; Chuan Zhou; Philip N Cascade; Naama Bogot; Ella A Kazerooni; Yi-Ta Wu; Jun Wei
Journal:  Med Phys       Date:  2007-04       Impact factor: 4.071

8.  Automated volume analysis of head and neck lesions on CT scans using 3D level set segmentation.

Authors:  Ethan Street; Lubomir Hadjiiski; Berkman Sahiner; Sachin Gujar; Mohannad Ibrahim; Suresh K Mukherji; Heang-Ping Chan
Journal:  Med Phys       Date:  2007-11       Impact factor: 4.071

9.  Urinary bladder segmentation in CT urography (CTU) using CLASS.

Authors:  Lubomir Hadjiiski; Heang-Ping Chan; Richard H Cohan; Elaine M Caoili; Yuen Law; Kenny Cha; Chuan Zhou; Jun Wei
Journal:  Med Phys       Date:  2013-11       Impact factor: 4.071

10.  CT urography: segmentation of urinary bladder using CLASS with local contour refinement.

Authors:  Kenny Cha; Lubomir Hadjiiski; Heang-Ping Chan; Elaine M Caoili; Richard H Cohan; Chuan Zhou
Journal:  Phys Med Biol       Date:  2014-05-07       Impact factor: 3.609

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