Literature DB >> 30473058

Unsupervised machine learning of radiomic features for predicting treatment response and overall survival of early stage non-small cell lung cancer patients treated with stereotactic body radiation therapy.

Hongming Li1, Maya Galperin-Aizenberg1, Daniel Pryma1, Charles B Simone2, Yong Fan3.   

Abstract

BACKGROUND AND
PURPOSE: To predict treatment response and survival of NSCLC patients receiving stereotactic body radiation therapy (SBRT), we develop an unsupervised machine learning method for stratifying patients and extracting meta-features simultaneously based on imaging data.
MATERIAL AND METHODS: This study was performed based on an 18F-FDG-PET dataset of 100 consecutive patients who were treated with SBRT for early stage NSCLC. Each patient's tumor was characterized by 722 radiomic features. An unsupervised two-way clustering method was used to identify groups of patients and radiomic features simultaneously. The groups of patients were compared in terms of survival and freedom from nodal failure. Meta-features were computed for building survival models to predict survival and free of nodal failure.
RESULTS: Differences were found between 2 groups of patients when the patients were clustered into 3 groups in terms of both survival (p = 0.003) and freedom from nodal failure (p = 0.038). Average concordance measures for predicting survival and nodal failure were 0.640±0.029 and 0.664±0.063 respectively, better than those obtained by prediction models built upon clinical variables (p < 0.04).
CONCLUSIONS: The evaluation results demonstrate that our method allows us to stratify patients and predict survival and freedom from nodal failure with better performance than current alternative methods.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Non-small cell lung cancer; Radiomics; Stereotactic body radiation therapy; Unsupervised machine learning

Mesh:

Substances:

Year:  2018        PMID: 30473058      PMCID: PMC6261331          DOI: 10.1016/j.radonc.2018.06.025

Source DB:  PubMed          Journal:  Radiother Oncol        ISSN: 0167-8140            Impact factor:   6.280


  35 in total

1.  Selecting radiomic features from FDG-PET images for cancer treatment outcome prediction.

Authors:  Chunfeng Lian; Su Ruan; Thierry Denœux; Fabrice Jardin; Pierre Vera
Journal:  Med Image Anal       Date:  2016-05-19       Impact factor: 8.545

2.  Imaging features from pretreatment CT scans are associated with clinical outcomes in nonsmall-cell lung cancer patients treated with stereotactic body radiotherapy.

Authors:  Qian Li; Jongphil Kim; Yoganand Balagurunathan; Ying Liu; Kujtim Latifi; Olya Stringfield; Alberto Garcia; Eduardo G Moros; Thomas J Dilling; Matthew B Schabath; Zhaoxiang Ye; Robert J Gillies
Journal:  Med Phys       Date:  2017-06-24       Impact factor: 4.071

Review 3.  Radiomics: extracting more information from medical images using advanced feature analysis.

Authors:  Philippe Lambin; Emmanuel Rios-Velazquez; Ralph Leijenaar; Sara Carvalho; Ruud G P M van Stiphout; Patrick Granton; Catharina M L Zegers; Robert Gillies; Ronald Boellard; André Dekker; Hugo J W L Aerts
Journal:  Eur J Cancer       Date:  2012-01-16       Impact factor: 9.162

4.  Early-Stage Non-Small Cell Lung Cancer: Quantitative Imaging Characteristics of (18)F Fluorodeoxyglucose PET/CT Allow Prediction of Distant Metastasis.

Authors:  Jia Wu; Todd Aguilera; David Shultz; Madhu Gudur; Daniel L Rubin; Billy W Loo; Maximilian Diehn; Ruijiang Li
Journal:  Radiology       Date:  2016-04-05       Impact factor: 11.105

5.  FDG PET/CT texture analysis for predicting the outcome of lung cancer treated by stereotactic body radiation therapy.

Authors:  Pierre Lovinfosse; Zsolt Levente Janvary; Philippe Coucke; Sébastien Jodogne; Claire Bernard; Mathieu Hatt; Dimitris Visvikis; Nicolas Jansen; Bernard Duysinx; Roland Hustinx
Journal:  Eur J Nucl Med Mol Imaging       Date:  2016-01-30       Impact factor: 9.236

6.  Computational Radiomics System to Decode the Radiographic Phenotype.

Authors:  Joost J M van Griethuysen; Andriy Fedorov; Chintan Parmar; Ahmed Hosny; Nicole Aucoin; Vivek Narayan; Regina G H Beets-Tan; Jean-Christophe Fillion-Robin; Steve Pieper; Hugo J W L Aerts
Journal:  Cancer Res       Date:  2017-11-01       Impact factor: 12.701

7.  Adequate sample size for developing prediction models is not simply related to events per variable.

Authors:  Emmanuel O Ogundimu; Douglas G Altman; Gary S Collins
Journal:  J Clin Epidemiol       Date:  2016-03-08       Impact factor: 6.437

8.  CT imaging features associated with recurrence in non-small cell lung cancer patients after stereotactic body radiotherapy.

Authors:  Qian Li; Jongphil Kim; Yoganand Balagurunathan; Jin Qi; Ying Liu; Kujtim Latifi; Eduardo G Moros; Matthew B Schabath; Zhaoxiang Ye; Robert J Gillies; Thomas J Dilling
Journal:  Radiat Oncol       Date:  2017-09-25       Impact factor: 3.481

9.  The effect of SUV discretization in quantitative FDG-PET Radiomics: the need for standardized methodology in tumor texture analysis.

Authors:  Ralph T H Leijenaar; Georgi Nalbantov; Sara Carvalho; Wouter J C van Elmpt; Esther G C Troost; Ronald Boellaard; Hugo J W L Aerts; Robert J Gillies; Philippe Lambin
Journal:  Sci Rep       Date:  2015-08-05       Impact factor: 4.379

10.  Radiomics: Images Are More than Pictures, They Are Data.

Authors:  Robert J Gillies; Paul E Kinahan; Hedvig Hricak
Journal:  Radiology       Date:  2015-11-18       Impact factor: 11.105

View more
  30 in total

Review 1.  NCTN Assessment on Current Applications of Radiomics in Oncology.

Authors:  Ke Nie; Hania Al-Hallaq; X Allen Li; Stanley H Benedict; Jason W Sohn; Jean M Moran; Yong Fan; Mi Huang; Michael V Knopp; Jeff M Michalski; James Monroe; Ceferino Obcemea; Christina I Tsien; Timothy Solberg; Jackie Wu; Ping Xia; Ying Xiao; Issam El Naqa
Journal:  Int J Radiat Oncol Biol Phys       Date:  2019-01-31       Impact factor: 7.038

2.  Robust Collaborative Clustering of Subjects and Radiomic Features for Cancer Prognosis.

Authors:  Hangfan Liu; Hongming Li; Mohamad Habes; Yuemeng Li; Pamela Boimel; James Janopaul-Naylor; Ying Xiao; Edgar Ben-Josef; Yong Fan
Journal:  IEEE Trans Biomed Eng       Date:  2020-01-27       Impact factor: 4.538

3.  COLLABORATIVE CLUSTERING OF SUBJECTS AND RADIOMIC FEATURES FOR PREDICTING CLINICAL OUTCOMES OF RECTAL CANCER PATIENTS.

Authors:  Hangfan Liu; Hongming Li; Pamela Boimel; James Janopaul-Naylor; Haoyu Zhong; Ying Xiao; Edgar Ben-Josef; Yong Fan
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2019-07-11

Review 4.  Machine Learning and Deep Neural Networks in Thoracic and Cardiovascular Imaging.

Authors:  Tara A Retson; Alexandra H Besser; Sean Sall; Daniel Golden; Albert Hsiao
Journal:  J Thorac Imaging       Date:  2019-05       Impact factor: 3.000

5.  Adaptive Sparsity Regularization Based Collaborative Clustering for Cancer Prognosis.

Authors:  Hangfan Liu; Hongming Li; Yuemeng Li; Shi Yin; Pamela Boimel; James Janopaul-Naylor; Haoyu Zhong; Ying Xiao; Edgar Ben-Josef; Yong Fan
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

6.  The Cancer Imaging Phenomics Toolkit (CaPTk): Technical Overview.

Authors:  Sarthak Pati; Ashish Singh; Saima Rathore; Aimilia Gastounioti; Mark Bergman; Phuc Ngo; Sung Min Ha; Dimitrios Bounias; James Minock; Grayson Murphy; Hongming Li; Amit Bhattarai; Adam Wolf; Patmaa Sridaran; Ratheesh Kalarot; Hamed Akbari; Aristeidis Sotiras; Siddhesh P Thakur; Ragini Verma; Russell T Shinohara; Paul Yushkevich; Yong Fan; Despina Kontos; Christos Davatzikos; Spyridon Bakas
Journal:  Brainlesion       Date:  2020-05-19

7.  External validation of radiomics-based predictive models in low-dose CT screening for early lung cancer diagnosis.

Authors:  Noemi Garau; Chiara Paganelli; Paul Summers; Wookjin Choi; Sadegh Alam; Wei Lu; Cristiana Fanciullo; Massimo Bellomi; Guido Baroni; Cristiano Rampinelli
Journal:  Med Phys       Date:  2020-06-23       Impact factor: 4.071

8.  Integration of Risk Survival Measures Estimated From Pre- and Posttreatment Computed Tomography Scans Improves Stratification of Patients With Early-Stage Non-small Cell Lung Cancer Treated With Stereotactic Body Radiation Therapy.

Authors:  Zhicheng Jiao; Hongming Li; Ying Xiao; Charu Aggarwal; Maya Galperin-Aizenberg; Daniel Pryma; Charles B Simone; Steven J Feigenberg; Gary D Kao; Yong Fan
Journal:  Int J Radiat Oncol Biol Phys       Date:  2021-01-19       Impact factor: 7.038

Review 9.  Stereotactic radiotherapy for early stage non-small cell lung cancer: current standards and ongoing research.

Authors:  Eugenia Vlaskou Badra; Michael Baumgartl; Silvia Fabiano; Aurélien Jongen; Matthias Guckenberger
Journal:  Transl Lung Cancer Res       Date:  2021-04

10.  Oropharyngeal cancer patient stratification using random forest based-learning over high-dimensional radiomic features.

Authors:  Harsh Patel; David M Vock; G Elisabeta Marai; Clifton D Fuller; Abdallah S R Mohamed; Guadalupe Canahuate
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.