Literature DB >> 30396511

A Unified Walking Model for Dimeric Motor Proteins.

Kazuo Sasaki1, Motoshi Kaya2, Hideo Higuchi3.   

Abstract

Dimeric motor proteins, kinesin-1, cytoplasmic dynein-1, and myosin-V, move stepwise along microtubules and actin filaments with a regular step size. The motors take backward as well as forward steps. The step ratio r and dwell time τ, which are the ratio of the number of backward steps to the number of forward steps and the time between consecutive steps, respectively, were observed to change with the load. To understand the movement of motor proteins, we constructed a unified and simple mathematical model to explain the load dependencies of r and of τ measured for the above three types of motors quantitatively. Our model consists of three states, and the forward and backward steps are represented by the cycles of transitions visiting different pairs of states among the three, implying that a backward step is not the reversal of a forward step. Each of r and τ is given by a simple expression containing two exponential functions. The experimental data for r and τ for dynein available in the literature are not sufficient for a quantitative analysis, which is in contrast to those for kinesin and myosin-V. We reanalyze the data to obtain r and τ of native dynein to make up the insufficient data to fit them to the model. Our model successfully describes the behavior of r and τ for all of the motors in a wide range of loads from large assisting loads to superstall loads.
Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30396511      PMCID: PMC6303276          DOI: 10.1016/j.bpj.2018.09.032

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

1.  Single-molecule rupture dynamics on multidimensional landscapes.

Authors:  Yohichi Suzuki; Olga K Dudko
Journal:  Phys Rev Lett       Date:  2010-01-25       Impact factor: 9.161

2.  Direct observation of base-pair stepping by RNA polymerase.

Authors:  Elio A Abbondanzieri; William J Greenleaf; Joshua W Shaevitz; Robert Landick; Steven M Block
Journal:  Nature       Date:  2005-11-13       Impact factor: 49.962

3.  Understanding mechanochemical coupling in kinesins using first-passage-time processes.

Authors:  Anatoly B Kolomeisky; Evgeny B Stukalin; Alex A Popov
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2005-03-08

4.  The tethered motor domain of a kinesin-microtubule complex catalyzes reversible synthesis of bound ATP.

Authors:  David D Hackney
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-09       Impact factor: 11.205

5.  Force and velocity measured for single molecules of RNA polymerase.

Authors:  M D Wang; M J Schnitzer; H Yin; R Landick; J Gelles; S M Block
Journal:  Science       Date:  1998-10-30       Impact factor: 47.728

6.  Biomolecules under mechanical stress: a simple mechanism of complex behavior.

Authors:  Yohichi Suzuki; Olga K Dudko
Journal:  J Chem Phys       Date:  2011-02-14       Impact factor: 3.488

7.  Nonlinear elasticity and an 8-nm working stroke of single myosin molecules in myofilaments.

Authors:  Motoshi Kaya; Hideo Higuchi
Journal:  Science       Date:  2010-08-06       Impact factor: 47.728

8.  Myosin-V stepping kinetics: a molecular model for processivity.

Authors:  M Rief; R S Rock; A D Mehta; M S Mooseker; R E Cheney; J A Spudich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

9.  A universal pathway for kinesin stepping.

Authors:  Bason E Clancy; William M Behnke-Parks; Johan O L Andreasson; Steven S Rosenfeld; Steven M Block
Journal:  Nat Struct Mol Biol       Date:  2011-08-14       Impact factor: 15.369

10.  Control of cytoplasmic dynein force production and processivity by its C-terminal domain.

Authors:  Matthew P Nicholas; Peter Höök; Sibylle Brenner; Caitlin L Wynne; Richard B Vallee; Arne Gennerich
Journal:  Nat Commun       Date:  2015-02-11       Impact factor: 14.919

View more
  4 in total

Review 1.  Physical parameters describing neuronal cargo transport by kinesin UNC-104.

Authors:  Kumiko Hayashi; Shiori Matsumoto; Miki G Miyamoto; Shinsuke Niwa
Journal:  Biophys Rev       Date:  2019-05-21

2.  Dynamics of ATP-dependent and ATP-independent steppings of myosin-V on actin: catch-bond characteristics.

Authors:  Ping Xie
Journal:  J R Soc Interface       Date:  2020-04-08       Impact factor: 4.118

3.  Backstepping Mechanism of Kinesin-1.

Authors:  Algirdas Toleikis; Nicholas J Carter; Robert A Cross
Journal:  Biophys J       Date:  2020-10-06       Impact factor: 4.033

4.  A model for the chemomechanical coupling of myosin-V molecular motors.

Authors:  Ping Xie
Journal:  RSC Adv       Date:  2019-08-27       Impact factor: 4.036

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.