Literature DB >> 20366741

Single-molecule rupture dynamics on multidimensional landscapes.

Yohichi Suzuki1, Olga K Dudko.   

Abstract

We explore emergent effects of multidimensionality of the free energy landscape on single-molecule kinetics under constant force. The proposed minimal model reveals the existence of a spectrum of unusual scenarios for the force-dependent lifetime, all of which are shown to occur on a free energy landscape with a single transition state. We present an analytical solution that governs single-molecule responses to a constant force and relates them to microscopic parameters of the system.

Mesh:

Year:  2010        PMID: 20366741     DOI: 10.1103/PhysRevLett.104.048101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  29 in total

1.  Compaction and tensile forces determine the accuracy of folding landscape parameters from single molecule pulling experiments.

Authors:  Greg Morrison; Changbong Hyeon; Michael Hinczewski; D Thirumalai
Journal:  Phys Rev Lett       Date:  2011-03-29       Impact factor: 9.161

2.  The two-pathway model of the biological catch-bond as a limit of the allosteric model.

Authors:  Yuriy V Pereverzev; Eugenia Prezhdo; Evgeni V Sokurenko
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

3.  Free energy profiles from single-molecule pulling experiments.

Authors:  Gerhard Hummer; Attila Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

4.  Bayesian Uncertainty Quantification for Bond Energies and Mobilities Using Path Integral Analysis.

Authors:  Joshua C Chang; Pak-Wing Fok; Tom Chou
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

5.  A transformation for the mechanical fingerprints of complex biomolecular interactions.

Authors:  Yaojun Zhang; Olga K Dudko
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-23       Impact factor: 11.205

6.  Tension-dependent structural deformation alters single-molecule transition kinetics.

Authors:  B Sudhanshu; S Mihardja; E F Koslover; S Mehraeen; C Bustamante; A J Spakowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-18       Impact factor: 11.205

7.  Force-Dependent Facilitated Dissociation Can Generate Protein-DNA Catch Bonds.

Authors:  Katelyn Dahlke; Jing Zhao; Charles E Sing; Edward J Banigan
Journal:  Biophys J       Date:  2019-08-02       Impact factor: 4.033

8.  Dissipation potentials from elastic collapse.

Authors:  Joe Goddard; Ken Kamrin
Journal:  Proc Math Phys Eng Sci       Date:  2019-06-19       Impact factor: 2.704

9.  Focal Adhesion Kinase: The Reversible Molecular Mechanosensor.

Authors:  Samuel Bell; Eugene M Terentjev
Journal:  Biophys J       Date:  2017-06-06       Impact factor: 4.033

10.  Stress-enhanced gelation: a dynamic nonlinearity of elasticity.

Authors:  Norman Y Yao; Chase P Broedersz; Martin Depken; Daniel J Becker; Martin R Pollak; Frederick C Mackintosh; David A Weitz
Journal:  Phys Rev Lett       Date:  2013-01-03       Impact factor: 9.161

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