Literature DB >> 16339908

The tethered motor domain of a kinesin-microtubule complex catalyzes reversible synthesis of bound ATP.

David D Hackney1.   

Abstract

Although the steps for the forward reaction of ATP hydrolysis by the motor protein kinesin have been studied extensively, the rates for the reverse reactions and thus the energy changes at each step are not as well defined. Oxygen isotopic exchange between water and P(i) was used to evaluate the reverse rates. The fraction of the kinesin x ADP x P(i) complex that reverts to ATP before release of P(i) during net hydrolysis was approximately 0 and approximately 2.6% in the absence and presence of microtubules (MTs), respectively. The rate of synthesis of bound ATP from free P(i) and the MT x kinesin x ADP complex was approximately 1.7 M(-1) x s(-1) (K0.5 ADP = 70 microM) with monomeric kinesin in the absence of net hydrolysis. Synthesis of bound ATP from the ADP of the tethered head of a dimer-MT complex was 20-fold faster than for the monomer-MT complex. This MT-activated ATP synthesis at the tethered head is in marked contrast to the lack of MT stimulation of ADP release from the same site. The more rapid ATP synthesis with dimers suggests that the tethered head binds behind the strongly attached head, because this positions the neck linker of the tethered head toward the plus end of the MT and would thus facilitate its docking on synthesis of ATP. The observed rate of ATP synthesis also puts limits on the overall energetics that suggest that a significant fraction of the free energy of ATP hydrolysis is available to drive the docking of the neck linker on binding of ATP.

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Year:  2005        PMID: 16339908      PMCID: PMC1317912          DOI: 10.1073/pnas.0505288102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

1.  Mechanically driven ATP synthesis by F1-ATPase.

Authors:  Hiroyasu Itoh; Akira Takahashi; Kengo Adachi; Hiroyuki Noji; Ryohei Yasuda; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Nature       Date:  2004-01-29       Impact factor: 49.962

2.  What kinesin does at roadblocks: the coordination mechanism for molecular walking.

Authors:  Isabelle M-T C Crevel; Miklós Nyitrai; María C Alonso; Stefan Weiss; Michael A Geeves; Robert A Cross
Journal:  EMBO J       Date:  2003-12-18       Impact factor: 11.598

3.  Inhibition of kinesin motility by ADP and phosphate supports a hand-over-hand mechanism.

Authors:  William R Schief; Rutilio H Clark; Alvaro H Crevenna; Jonathon Howard
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-20       Impact factor: 11.205

4.  Modulation of kinesin half-site ADP release and kinetic processivity by a spacer between the head groups.

Authors:  David D Hackney; Maryanne F Stock; Jodi Moore; Reid A Patterson
Journal:  Biochemistry       Date:  2003-10-21       Impact factor: 3.162

5.  Mechanics of the kinesin step.

Authors:  N J Carter; R A Cross
Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

6.  Oxygen-18 probes of enzymic reactions of phosphate compounds.

Authors:  D D Hackney; K E Stempel; P D Boyer
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

Review 7.  The kinetic mechanism of kinesin.

Authors:  Robert A Cross
Journal:  Trends Biochem Sci       Date:  2004-06       Impact factor: 13.807

8.  Analysis of positional isotope exchange in ATP by cleavage of the beta P-O gamma P bond. Demonstration of negligible positional isotope exchange by myosin.

Authors:  M P Dale; D D Hackney
Journal:  Biochemistry       Date:  1987-12-15       Impact factor: 3.162

9.  Theoretical analysis of distribution of [18O]Pi species during exchange with water. Application to exchanges catalyzed by yeast inorganic pyrophosphatase.

Authors:  D D Hackney
Journal:  J Biol Chem       Date:  1980-06-10       Impact factor: 5.157

10.  Oxygen exchange between Pi in the medium and water during ATP hydrolysis mediated by skinned fibers from rabbit skeletal muscle. Evidence for Pi binding to a force-generating state.

Authors:  M R Webb; M G Hibberd; Y E Goldman; D R Trentham
Journal:  J Biol Chem       Date:  1986-11-25       Impact factor: 5.157

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  35 in total

1.  A structural perspective on the dynamics of kinesin motors.

Authors:  Changbong Hyeon; José N Onuchic
Journal:  Biophys J       Date:  2011-12-07       Impact factor: 4.033

2.  Kinetics of nucleotide-dependent structural transitions in the kinesin-1 hydrolysis cycle.

Authors:  Keith J Mickolajczyk; Nathan C Deffenbaugh; Jaime Ortega Arroyo; Joanna Andrecka; Philipp Kukura; William O Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-16       Impact factor: 11.205

3.  The structural kinetics of switch-1 and the neck linker explain the functions of kinesin-1 and Eg5.

Authors:  Joseph M Muretta; Yonggun Jun; Steven P Gross; Jennifer Major; David D Thomas; Steven S Rosenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-16       Impact factor: 11.205

Review 4.  To step or not to step? How biochemistry and mechanics influence processivity in Kinesin and Eg5.

Authors:  Megan T Valentine; Susan P Gilbert
Journal:  Curr Opin Cell Biol       Date:  2006-12-26       Impact factor: 8.382

5.  Backsteps induced by nucleotide analogs suggest the front head of kinesin is gated by strain.

Authors:  Nicholas R Guydosh; Steven M Block
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-12       Impact factor: 11.205

6.  High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations.

Authors:  Masahide Kikkawa; Nobutaka Hirokawa
Journal:  EMBO J       Date:  2006-08-31       Impact factor: 11.598

Review 7.  Kinesin motor mechanics: binding, stepping, tracking, gating, and limping.

Authors:  Steven M Block
Journal:  Biophys J       Date:  2007-02-26       Impact factor: 4.033

8.  Kinesin steps do not alternate in size.

Authors:  Adrian N Fehr; Charles L Asbury; Steven M Block
Journal:  Biophys J       Date:  2007-12-14       Impact factor: 4.033

9.  A mobile kinesin-head intermediate during the ATP-waiting state.

Authors:  Ana B Asenjo; Hernando Sosa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-25       Impact factor: 11.205

10.  An atomic-level mechanism for activation of the kinesin molecular motors.

Authors:  Charles V Sindelar; Kenneth H Downing
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-16       Impact factor: 11.205

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