Literature DB >> 30144098

Machine learning and modeling: Data, validation, communication challenges.

Issam El Naqa1, Dan Ruan2, Gilmer Valdes3, Andre Dekker4, Todd McNutt5, Yaorong Ge6, Q Jackie Wu7, Jung Hun Oh8, Maria Thor8, Wade Smith9, Arvind Rao10,11, Clifton Fuller10, Ying Xiao12, Frank Manion1, Matthew Schipper1, Charles Mayo1, Jean M Moran1, Randall Ten Haken1.   

Abstract

With the era of big data, the utilization of machine learning algorithms in radiation oncology is rapidly growing with applications including: treatment response modeling, treatment planning, contouring, organ segmentation, image-guidance, motion tracking, quality assurance, and more. Despite this interest, practical clinical implementation of machine learning as part of the day-to-day clinical operations is still lagging. The aim of this white paper is to further promote progress in this new field of machine learning in radiation oncology by highlighting its untapped advantages and potentials for clinical advancement, while also presenting current challenges and open questions for future research. The targeted audience of this paper includes newcomers as well as practitioners in the field of medical physics/radiation oncology. The paper also provides general recommendations to avoid common pitfalls when applying these powerful data analytic tools to medical physics and radiation oncology problems and suggests some guidelines for transparent and informative reporting of machine learning results.
© 2018 American Association of Physicists in Medicine.

Entities:  

Keywords:  big data; machine learning; radiation oncology

Mesh:

Year:  2018        PMID: 30144098      PMCID: PMC6181755          DOI: 10.1002/mp.12811

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  55 in total

1.  Unraveling biophysical interactions of radiation pneumonitis in non-small-cell lung cancer via Bayesian network analysis.

Authors:  Yi Luo; Issam El Naqa; Daniel L McShan; Dipankar Ray; Ines Lohse; Martha M Matuszak; Dawn Owen; Shruti Jolly; Theodore S Lawrence; Feng-Ming Spring Kong; Randall K Ten Haken
Journal:  Radiother Oncol       Date:  2017-02-22       Impact factor: 6.280

2.  A machine learning approach to the accurate prediction of multi-leaf collimator positional errors.

Authors:  Joel N K Carlson; Jong Min Park; So-Yeon Park; Jong In Park; Yunseok Choi; Sung-Joon Ye
Journal:  Phys Med Biol       Date:  2016-03-07       Impact factor: 3.609

3.  Clinical evaluation of atlas and deep learning based automatic contouring for lung cancer.

Authors:  Tim Lustberg; Johan van Soest; Mark Gooding; Devis Peressutti; Paul Aljabar; Judith van der Stoep; Wouter van Elmpt; Andre Dekker
Journal:  Radiother Oncol       Date:  2017-12-05       Impact factor: 6.280

4.  Beam-orientation customization using an artificial neural network.

Authors:  C G Rowbottom; S Webb; M Oldham
Journal:  Phys Med Biol       Date:  1999-09       Impact factor: 3.609

5.  A neural network to predict symptomatic lung injury.

Authors:  M T Munley; J Y Lo; G S Sibley; G C Bentel; M S Anscher; L B Marks
Journal:  Phys Med Biol       Date:  1999-09       Impact factor: 3.609

6.  Datamining approaches for modeling tumor control probability.

Authors:  Issam El Naqa; Joseph O Deasy; Yi Mu; Ellen Huang; Andrew J Hope; Patricia E Lindsay; Aditya Apte; James Alaly; Jeffrey D Bradley
Journal:  Acta Oncol       Date:  2010-03-02       Impact factor: 4.089

7.  Dosimetric correlates for acute esophagitis in patients treated with radiotherapy for lung carcinoma.

Authors:  Jeffrey Bradley; Joseph O Deasy; Soeren Bentzen; Issam El-Naqa
Journal:  Int J Radiat Oncol Biol Phys       Date:  2004-03-15       Impact factor: 7.038

8.  Patient geometry-driven information retrieval for IMRT treatment plan quality control.

Authors:  Binbin Wu; Francesco Ricchetti; Giuseppe Sanguineti; Misha Kazhdan; Patricio Simari; Ming Chuang; Russell Taylor; Robert Jacques; Todd McNutt
Journal:  Med Phys       Date:  2009-12       Impact factor: 4.071

9.  On using an adaptive neural network to predict lung tumor motion during respiration for radiotherapy applications.

Authors:  Marcus Isaksson; Joakim Jalden; Martin J Murphy
Journal:  Med Phys       Date:  2005-12       Impact factor: 4.071

10.  The extent and consequences of p-hacking in science.

Authors:  Megan L Head; Luke Holman; Rob Lanfear; Andrew T Kahn; Michael D Jennions
Journal:  PLoS Biol       Date:  2015-03-13       Impact factor: 8.029

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  17 in total

Review 1.  Artificial Intelligence: reshaping the practice of radiological sciences in the 21st century.

Authors:  Issam El Naqa; Masoom A Haider; Maryellen L Giger; Randall K Ten Haken
Journal:  Br J Radiol       Date:  2020-02-01       Impact factor: 3.039

Review 2.  Machine Learning and Imaging Informatics in Oncology.

Authors:  Huan-Hsin Tseng; Lise Wei; Sunan Cui; Yi Luo; Randall K Ten Haken; Issam El Naqa
Journal:  Oncology       Date:  2018-11-23       Impact factor: 2.935

3.  Computer Vision in the Operating Room: Opportunities and Caveats.

Authors:  Lauren R Kennedy-Metz; Pietro Mascagni; Antonio Torralba; Roger D Dias; Pietro Perona; Julie A Shah; Nicolas Padoy; Marco A Zenati
Journal:  IEEE Trans Med Robot Bionics       Date:  2020-11-24

4.  Integrating Multiomics Information in Deep Learning Architectures for Joint Actuarial Outcome Prediction in Non-Small Cell Lung Cancer Patients After Radiation Therapy.

Authors:  Sunan Cui; Randall K Ten Haken; Issam El Naqa
Journal:  Int J Radiat Oncol Biol Phys       Date:  2021-02-01       Impact factor: 8.013

5.  Artificial Intelligence in Dentistry: Chances and Challenges.

Authors:  F Schwendicke; W Samek; J Krois
Journal:  J Dent Res       Date:  2020-04-21       Impact factor: 6.116

6.  Machine learning applications in radiation oncology: Current use and needs to support clinical implementation.

Authors:  Charlotte L Brouwer; Anna M Dinkla; Liesbeth Vandewinckele; Wouter Crijns; Michaël Claessens; Dirk Verellen; Wouter van Elmpt
Journal:  Phys Imaging Radiat Oncol       Date:  2020-11-30

Review 7.  Requirements and reliability of AI in the medical context.

Authors:  Yoganand Balagurunathan; Ross Mitchell; Issam El Naqa
Journal:  Phys Med       Date:  2021-03-13       Impact factor: 2.685

8.  RapidPlan knowledge based planning: iterative learning process and model ability to steer planning strategies.

Authors:  A Fogliata; L Cozzi; G Reggiori; A Stravato; F Lobefalo; C Franzese; D Franceschini; S Tomatis; M Scorsetti
Journal:  Radiat Oncol       Date:  2019-10-30       Impact factor: 3.481

9.  Discrimination of DNA Methylation Signal from Background Variation for Clinical Diagnostics.

Authors:  Robersy Sanchez; Xiaodong Yang; Thomas Maher; Sally A Mackenzie
Journal:  Int J Mol Sci       Date:  2019-10-27       Impact factor: 5.923

10.  Training and Validation of Deep Learning-Based Auto-Segmentation Models for Lung Stereotactic Ablative Radiotherapy Using Retrospective Radiotherapy Planning Contours.

Authors:  Jordan Wong; Vicky Huang; Joshua A Giambattista; Tony Teke; Carter Kolbeck; Jonathan Giambattista; Siavash Atrchian
Journal:  Front Oncol       Date:  2021-06-07       Impact factor: 6.244

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