Literature DB >> 30084741

Testing a Multivariate Proteomic Panel for Traumatic Brain Injury Biomarker Discovery: A TRACK-TBI Pilot Study.

J Russell Huie1,2, Ramon Diaz-Arrastia3, John K Yue1,2, Marco D Sorani2, Ava M Puccio4, David O Okonkwo5, Geoffrey T Manley1,2, Adam R Ferguson1,2,5.   

Abstract

The complex and heterogeneous nature of traumatic brain injury (TBI) has rendered the identification of diagnostic and prognostic biomarkers elusive. A single acute biomarker may not be sufficient to categorize injury severity and/or predict outcome. Using multivariate dimension reduction analyses, we tested the sensitivity and specificity of a multi-analyte panel of proteins as an ensemble biomarker for TBI. Serum was collected within 24 h of injury in a cohort of 130 patients enrolled in the multi-center prospective Transforming Research and Clinical Knowledge in Traumatic Brain Injury Pilot (TRACK-TBI Pilot) study and run on an array that measured 72 proteins. Using unsupervised principal components analysis, we first identified the subset of protein changes accounting for the most variance across patients. This yielded a group of 21 proteins that reflected an inverse relationship between inflammatory cytokines and regulators of anti-inflammation, and generated an individual inflammatory profile score for each patient. We then tested the association between these scores and computed tomography (CT) findings at hospital admission, as well as their prognostic association with functional recovery at 3 and 6 months (Glasgow Outcome Scale-Extended), and cognitive recovery at 6 months (California Verbal Learning Test, Second Edition) after injury. Inflammatory signatures were significantly increased in patients with positive CT findings, as well as in those who showed poor or incomplete recovery. Inflammation biomarker scores also showed significant sensitivity and specificity as a discriminator of these outcome measures (all areas under the curve [AUCs] >0.62). This proof of concept for the feasibility of multivariate biomarker identification demonstrates the prognostic validity of using a proteomic panel as a potential biomarker for TBI.

Entities:  

Keywords:  TBI; biomarkers; proteomics

Year:  2018        PMID: 30084741      PMCID: PMC6306686          DOI: 10.1089/neu.2017.5449

Source DB:  PubMed          Journal:  J Neurotrauma        ISSN: 0897-7151            Impact factor:   5.269


  49 in total

Review 1.  Recommendations for the use of common outcome measures in traumatic brain injury research.

Authors:  Elisabeth A Wilde; Gale G Whiteneck; Jennifer Bogner; Tamara Bushnik; David X Cifu; Sureyya Dikmen; Louis French; Joseph T Giacino; Tessa Hart; James F Malec; Scott R Millis; Thomas A Novack; Mark Sherer; David S Tulsky; Rodney D Vanderploeg; Nicole von Steinbuechel
Journal:  Arch Phys Med Rehabil       Date:  2010-11       Impact factor: 3.966

2.  Comparing factor trait and state scores across ages and cultures.

Authors:  R B Cattell
Journal:  J Gerontol       Date:  1969-07

3.  A New Panel of Blood Biomarkers for the Diagnosis of Mild Traumatic Brain Injury/Concussion in Adults.

Authors:  Rongzi Shan; Joanna Szmydynger-Chodobska; Otis U Warren; Farah Mohammad; Brian J Zink; Adam Chodobski
Journal:  J Neurotrauma       Date:  2015-06-11       Impact factor: 5.269

4.  Elevated plasma MCP-1 concentration following traumatic brain injury as a potential "predisposition" factor associated with an increased risk for subsequent development of Alzheimer's disease.

Authors:  Lap Ho; Wei Zhao; Kristen Dams-O'Connor; Cheuk Y Tang; Wayne Gordon; Elaine R Peskind; Shrishailam Yemul; Vahram Haroutunian; Giulio Maria Pasinetti
Journal:  J Alzheimers Dis       Date:  2012       Impact factor: 4.472

5.  High serum S100B levels for trauma patients without head injuries.

Authors:  R E Anderson; L O Hansson; O Nilsson; R Dijlai-Merzoug; G Settergren
Journal:  Neurosurgery       Date:  2001-06       Impact factor: 4.654

6.  GFAP and S100B in the acute phase of mild traumatic brain injury.

Authors:  Z Metting; N Wilczak; L A Rodiger; J M Schaaf; J van der Naalt
Journal:  Neurology       Date:  2012-04-18       Impact factor: 9.910

7.  Early IL-6 plasma concentrations correlate with severity of brain injury and pneumonia in brain-injured patients.

Authors:  Christian Woiciechowsky; Britta Schöning; Jacqueline Cobanov; Wolfgang R Lanksch; Hans-Dieter Volk; Wolf-Dieter Döcke
Journal:  J Trauma       Date:  2002-02

Review 8.  A review of the predictive ability of Glasgow Coma Scale scores in head-injured patients.

Authors:  Molly McNett
Journal:  J Neurosci Nurs       Date:  2007-04       Impact factor: 1.230

9.  Acute biomarkers of traumatic brain injury: relationship between plasma levels of ubiquitin C-terminal hydrolase-L1 and glial fibrillary acidic protein.

Authors:  Ramon Diaz-Arrastia; Kevin K W Wang; Linda Papa; Marco D Sorani; John K Yue; Ava M Puccio; Paul J McMahon; Tomoo Inoue; Esther L Yuh; Hester F Lingsma; Andrew I R Maas; Alex B Valadka; David O Okonkwo; Geoffrey T Manley
Journal:  J Neurotrauma       Date:  2013-10-09       Impact factor: 5.269

10.  Transforming research and clinical knowledge in traumatic brain injury pilot: multicenter implementation of the common data elements for traumatic brain injury.

Authors:  John K Yue; Mary J Vassar; Hester F Lingsma; Shelly R Cooper; David O Okonkwo; Alex B Valadka; Wayne A Gordon; Andrew I R Maas; Pratik Mukherjee; Esther L Yuh; Ava M Puccio; David M Schnyer; Geoffrey T Manley
Journal:  J Neurotrauma       Date:  2013-09-24       Impact factor: 5.269

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  16 in total

1.  Unsupervised Machine Learning Reveals Novel Traumatic Brain Injury Patient Phenotypes with Distinct Acute Injury Profiles and Long-Term Outcomes.

Authors:  Kaitlin A Folweiler; Danielle K Sandsmark; Ramon Diaz-Arrastia; Akiva S Cohen; Aaron J Masino
Journal:  J Neurotrauma       Date:  2020-03-11       Impact factor: 5.269

2.  Data Dissemination: Shortening the Long Tail of Traumatic Brain Injury Dark Data.

Authors:  Bridget E Hawkins; J Russell Huie; Carlos Almeida; Jiapei Chen; Adam R Ferguson
Journal:  J Neurotrauma       Date:  2019-03-29       Impact factor: 5.269

Review 3.  Neurotrauma as a big-data problem.

Authors:  J Russell Huie; Carlos A Almeida; Adam R Ferguson
Journal:  Curr Opin Neurol       Date:  2018-12       Impact factor: 5.710

4.  A Prospective Study of Acute Blood-Based Biomarkers for Sport-Related Concussion.

Authors:  Timothy B Meier; Daniel L Huber; Luisa Bohorquez-Montoya; Morgan E Nitta; Jonathan Savitz; T Kent Teague; Jeffrey J Bazarian; Ronald L Hayes; Lindsay D Nelson; Michael A McCrea
Journal:  Ann Neurol       Date:  2020-04-20       Impact factor: 10.422

5.  Mixture Model Framework for Traumatic Brain Injury Prognosis Using Heterogeneous Clinical and Outcome Data.

Authors:  Alan D Kaplan; Qi Cheng; K Aditya Mohan; Lindsay D Nelson; Sonia Jain; Harvey Levin; Abel Torres-Espin; Austin Chou; J Russell Huie; Adam R Ferguson; Michael McCrea; Joseph Giacino; Shivshankar Sundaram; Amy J Markowitz; Geoffrey T Manley
Journal:  IEEE J Biomed Health Inform       Date:  2022-03-07       Impact factor: 5.772

Review 6.  The Importance of Therapeutic Time Window in the Treatment of Traumatic Brain Injury.

Authors:  Maliheh Mohamadpour; Kristen Whitney; Peter J Bergold
Journal:  Front Neurosci       Date:  2019-01-23       Impact factor: 4.677

Review 7.  An integrated perspective linking physiological and psychological consequences of mild traumatic brain injury.

Authors:  Harm Jan van der Horn; Manon L Out; Myrthe E de Koning; Andrew R Mayer; Jacoba M Spikman; Iris E Sommer; Joukje van der Naalt
Journal:  J Neurol       Date:  2019-04-27       Impact factor: 4.849

8.  iTRAQ-based proteomic profiling reveals protein alterations after traumatic brain injury and supports thyroxine as a potential treatment.

Authors:  Zhongxiang Zhang; Jiangtao Yu; Pengcheng Wang; Lian Lin; Ruining Liu; Rong Zeng; Haoli Ma; Yan Zhao
Journal:  Mol Brain       Date:  2021-01-27       Impact factor: 4.041

9.  Modeling and Bioinformatics Identify Responders to G-CSF in Patients With Amyotrophic Lateral Sclerosis.

Authors:  Siw Johannesen; J Russell Huie; Bettina Budeus; Sebastian Peters; Anna M Wirth; Sabine Iberl; Tina Kammermaier; Ines Kobor; Eva Wirkert; Sabrina Küspert; Marlene Tahedl; Jochen Grassinger; Tobias Pukrop; Armin Schneider; Ludwig Aigner; Wilhelm Schulte-Mattler; Gerhard Schuierer; Winfried Koch; Tim-Henrik Bruun; Adam R Ferguson; Ulrich Bogdahn
Journal:  Front Neurol       Date:  2021-03-18       Impact factor: 4.003

Review 10.  "Omics" in traumatic brain injury: novel approaches to a complex disease.

Authors:  Sami Abu Hamdeh; Olli Tenovuo; Wilco Peul; Niklas Marklund
Journal:  Acta Neurochir (Wien)       Date:  2021-07-17       Impact factor: 2.216

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