Literature DB >> 30079128

TRANSFER LEARNING FOR DIAGNOSIS OF CONGENITAL ABNORMALITIES OF THE KIDNEY AND URINARY TRACT IN CHILDREN BASED ON ULTRASOUND IMAGING DATA.

Qiang Zheng1,2,3, Gregory Tasian4, Yong Fan1.   

Abstract

Classification of ultrasound (US) kidney images for diagnosis of congenital abnormalities of the kidney and urinary tract (CAKUT) in children is a challenging task. It is desirable to improve existing pattern classification models that are built upon conventional image features. In this study, we propose a transfer learning-based method to extract imaging features from US kidney images in order to improve the CAKUT diagnosis in children. Particularly, a pre-trained deep learning model (imagenet-caffe-alex) is adopted for transfer learning-based feature extraction from 3-channel feature maps computed from US images, including original images, gradient features, and distanced transform features. Support vector machine classifiers are then built upon different sets of features, including the transfer learning features, conventional imaging features, and their combination. Experimental results have demonstrated that the combination of transfer learning features and conventional imaging features yielded the best classification performance for distinguishing CAKUT patients from normal controls based on their US kidney images.

Entities:  

Keywords:  Chronic kidney disease; Transfer learning; Ultrasound imaging

Year:  2018        PMID: 30079128      PMCID: PMC6070297          DOI: 10.1109/ISBI.2018.8363854

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  10 in total

1.  Automatic classification of pulmonary peri-fissural nodules in computed tomography using an ensemble of 2D views and a convolutional neural network out-of-the-box.

Authors:  Francesco Ciompi; Bartjan de Hoop; Sarah J van Riel; Kaman Chung; Ernst Th Scholten; Matthijs Oudkerk; Pim A de Jong; Mathias Prokop; Bram van Ginneken
Journal:  Med Image Anal       Date:  2015-09-08       Impact factor: 8.545

2.  Transfer Learning with Convolutional Neural Networks for Classification of Abdominal Ultrasound Images.

Authors:  Phillip M Cheng; Harshawn S Malhi
Journal:  J Digit Imaging       Date:  2017-04       Impact factor: 4.056

3.  Development and Validation of a Deep Learning Algorithm for Detection of Diabetic Retinopathy in Retinal Fundus Photographs.

Authors:  Varun Gulshan; Lily Peng; Marc Coram; Martin C Stumpe; Derek Wu; Arunachalam Narayanaswamy; Subhashini Venugopalan; Kasumi Widner; Tom Madams; Jorge Cuadros; Ramasamy Kim; Rajiv Raman; Philip C Nelson; Jessica L Mega; Dale R Webster
Journal:  JAMA       Date:  2016-12-13       Impact factor: 56.272

4.  Image texture features predict renal function decline in patients with autosomal dominant polycystic kidney disease.

Authors:  Timothy L Kline; Panagiotis Korfiatis; Marie E Edwards; Kyongtae T Bae; Alan Yu; Arlene B Chapman; Michal Mrug; Jared J Grantham; Douglas Landsittel; William M Bennett; Bernard F King; Peter C Harris; Vicente E Torres; Bradley J Erickson
Journal:  Kidney Int       Date:  2017-05-20       Impact factor: 10.612

5.  A Dynamic Graph Cuts Method with Integrated Multiple Feature Maps for Segmenting Kidneys in 2D Ultrasound Images.

Authors:  Qiang Zheng; Steven Warner; Gregory Tasian; Yong Fan
Journal:  Acad Radiol       Date:  2018-02-12       Impact factor: 3.173

Review 6.  Imaging in Chronic Kidney Disease.

Authors:  Mario Meola; Sara Samoni; Ilaria Petrucci
Journal:  Contrib Nephrol       Date:  2016-05-12       Impact factor: 1.580

7.  SVM-Based CAC System for B-Mode Kidney Ultrasound Images.

Authors:  M B Subramanya; Vinod Kumar; Shaktidev Mukherjee; Manju Saini
Journal:  J Digit Imaging       Date:  2015-08       Impact factor: 4.056

8.  Dermatologist-level classification of skin cancer with deep neural networks.

Authors:  Andre Esteva; Brett Kuprel; Roberto A Novoa; Justin Ko; Susan M Swetter; Helen M Blau; Sebastian Thrun
Journal:  Nature       Date:  2017-01-25       Impact factor: 49.962

9.  Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning.

Authors:  Hoo-Chang Shin; Holger R Roth; Mingchen Gao; Le Lu; Ziyue Xu; Isabella Nogues; Jianhua Yao; Daniel Mollura; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2016-02-11       Impact factor: 10.048

10.  Association of Renal Elasticity and Renal Function Progression in Patients with Chronic Kidney Disease Evaluated by Real-Time Ultrasound Elastography.

Authors:  Hugo You-Hsien Lin; Yu-Li Lee; Kun-Der Lin; Yi-Wen Chiu; Shyi-Jang Shin; Shang-Jyh Hwang; Hung-Chun Chen; Chi-Chih Hung
Journal:  Sci Rep       Date:  2017-02-27       Impact factor: 4.379

  10 in total
  5 in total

1.  Automatic kidney segmentation in ultrasound images using subsequent boundary distance regression and pixelwise classification networks.

Authors:  Shi Yin; Qinmu Peng; Hongming Li; Zhengqiang Zhang; Xinge You; Katherine Fischer; Susan L Furth; Gregory E Tasian; Yong Fan
Journal:  Med Image Anal       Date:  2019-11-08       Impact factor: 8.545

2.  FULLY-AUTOMATIC SEGMENTATION OF KIDNEYS IN CLINICAL ULTRASOUND IMAGES USING A BOUNDARY DISTANCE REGRESSION NETWORK.

Authors:  Shi Yin; Zhengqiang Zhang; Hongming Li; Qinmu Peng; Xinge You; Susan L Furth; Gregory E Tasian; Yong Fan
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2019-07-11

3.  Robust Collaborative Clustering of Subjects and Radiomic Features for Cancer Prognosis.

Authors:  Hangfan Liu; Hongming Li; Mohamad Habes; Yuemeng Li; Pamela Boimel; James Janopaul-Naylor; Ying Xiao; Edgar Ben-Josef; Yong Fan
Journal:  IEEE Trans Biomed Eng       Date:  2020-01-27       Impact factor: 4.538

4.  Multi-instance Deep Learning of Ultrasound Imaging Data for Pattern Classification of Congenital Abnormalities of the Kidney and Urinary Tract in Children.

Authors:  Shi Yin; Qinmu Peng; Hongming Li; Zhengqiang Zhang; Xinge You; Katherine Fischer; Susan L Furth; Yong Fan; Gregory E Tasian
Journal:  Urology       Date:  2020-05-20       Impact factor: 2.649

Review 5.  Role of Artificial Intelligence in Kidney Disease.

Authors:  Qiongjing Yuan; Haixia Zhang; Tianci Deng; Shumei Tang; Xiangning Yuan; Wenbin Tang; Yanyun Xie; Huipeng Ge; Xiufen Wang; Qiaoling Zhou; Xiangcheng Xiao
Journal:  Int J Med Sci       Date:  2020-04-06       Impact factor: 3.738

  5 in total

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