Literature DB >> 26458112

Automatic classification of pulmonary peri-fissural nodules in computed tomography using an ensemble of 2D views and a convolutional neural network out-of-the-box.

Francesco Ciompi1, Bartjan de Hoop2, Sarah J van Riel3, Kaman Chung3, Ernst Th Scholten3, Matthijs Oudkerk4, Pim A de Jong2, Mathias Prokop5, Bram van Ginneken6.   

Abstract

In this paper, we tackle the problem of automatic classification of pulmonary peri-fissural nodules (PFNs). The classification problem is formulated as a machine learning approach, where detected nodule candidates are classified as PFNs or non-PFNs. Supervised learning is used, where a classifier is trained to label the detected nodule. The classification of the nodule in 3D is formulated as an ensemble of classifiers trained to recognize PFNs based on 2D views of the nodule. In order to describe nodule morphology in 2D views, we use the output of a pre-trained convolutional neural network known as OverFeat. We compare our approach with a recently presented descriptor of pulmonary nodule morphology, namely Bag of Frequencies, and illustrate the advantages offered by the two strategies, achieving performance of AUC = 0.868, which is close to the one of human experts.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chest CT; Convolutional neural networks; Deep learning; Lung cancer screening; OverFeat; Peri-fissural nodules

Mesh:

Year:  2015        PMID: 26458112     DOI: 10.1016/j.media.2015.08.001

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  51 in total

1.  A collaborative computer aided diagnosis (C-CAD) system with eye-tracking, sparse attentional model, and deep learning.

Authors:  Naji Khosravan; Haydar Celik; Baris Turkbey; Elizabeth C Jones; Bradford Wood; Ulas Bagci
Journal:  Med Image Anal       Date:  2018-10-28       Impact factor: 8.545

2.  Pulmonary nodule classification in lung cancer screening with three-dimensional convolutional neural networks.

Authors:  Shuang Liu; Yiting Xie; Artit Jirapatnakul; Anthony P Reeves
Journal:  J Med Imaging (Bellingham)       Date:  2017-11-14

Review 3.  Designing deep learning studies in cancer diagnostics.

Authors:  Andreas Kleppe; Ole-Johan Skrede; Sepp De Raedt; Knut Liestøl; David J Kerr; Håvard E Danielsen
Journal:  Nat Rev Cancer       Date:  2021-01-29       Impact factor: 60.716

Review 4.  Overview of deep learning in medical imaging.

Authors:  Kenji Suzuki
Journal:  Radiol Phys Technol       Date:  2017-07-08

5.  Deep feature learning for automatic tissue classification of coronary artery using optical coherence tomography.

Authors:  Atefeh Abdolmanafi; Luc Duong; Nagib Dahdah; Farida Cheriet
Journal:  Biomed Opt Express       Date:  2017-01-30       Impact factor: 3.732

6.  Mass detection in digital breast tomosynthesis: Deep convolutional neural network with transfer learning from mammography.

Authors:  Ravi K Samala; Heang-Ping Chan; Lubomir Hadjiiski; Mark A Helvie; Jun Wei; Kenny Cha
Journal:  Med Phys       Date:  2016-12       Impact factor: 4.071

7.  Automatic recognition of 3D GGO CT imaging signs through the fusion of hybrid resampling and layer-wise fine-tuning CNNs.

Authors:  Guanghui Han; Xiabi Liu; Guangyuan Zheng; Murong Wang; Shan Huang
Journal:  Med Biol Eng Comput       Date:  2018-06-06       Impact factor: 2.602

8.  Extracting 2D weak labels from volume labels using multiple instance learning in CT hemorrhage detection.

Authors:  Samuel W Remedios; Zihao Wu; Camilo Bermudez; Cailey I Kerley; Snehashis Roy; Mayur B Patel; John A Butman; Bennett A Landman; Dzung L Pham
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-10

9.  TRANSFER LEARNING FOR DIAGNOSIS OF CONGENITAL ABNORMALITIES OF THE KIDNEY AND URINARY TRACT IN CHILDREN BASED ON ULTRASOUND IMAGING DATA.

Authors:  Qiang Zheng; Gregory Tasian; Yong Fan
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

10.  PSF correction in soft X-ray tomography.

Authors:  Axel Ekman; Venera Weinhardt; Jian-Hua Chen; Gerry McDermott; Mark A Le Gros; Carolyn Larabell
Journal:  J Struct Biol       Date:  2018-06-13       Impact factor: 2.867

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