| Literature DB >> 29938972 |
F J Candel1, M Borges Sá, S Belda, G Bou, J L Del Pozo, O Estrada, R Ferrer, J González Del Castillo, A Julián-Jiménez, I Martín-Loeches, E Maseda, M Matesanz, P Ramírez, J T Ramos, J Rello, B Suberviola, A Suárez de la Rica, P Vidal.
Abstract
The incidence and prevalence of sepsis depend on the definitions and records that we use and we may be underestimating their impact. Up to 60% of the cases come from the community and in 30-60% we obtain microbiological information. Sometimes its presentation is ambiguous and there may be a delay in its detection, especially in the fragile population. Procalcitonin is the most validated biomarker for bacterial sepsis and the one that best discriminates the non-infectious cause. Presepsin and pro-adrenomedullin are useful for early diagnosis, risk stratification and prognosis in septic patients. The combination of biomarkers is even more useful to clarify an infectious cause than any isolated biomarker. Resuscitation with artificial colloids has worse results than crystalloids, especially in patients with renal insufficiency. The combination of saline solution and balanced crystalloids is associated with a better prognosis. Albumin is only recommended in patients who require a large volume of fluids. The modern molecular methods on the direct sample or the identification by MALDI-TOF on positive blood culture have helped to shorten the response times in diagnosis, to optimize the antibiotic treatment and to facilitate stewardship programs. The hemodynamic response in neonates and children is different from that in adults. In neonatal sepsis, persistent pulmonary hypertension leads to an increase in right ventricular afterload and heart failure with hepatomegaly. Hypotension, poor cardiac output with elevated systemic vascular resistance (cold shock) is often a terminal sign in septic shock. Developing ultra-fast Point-of-Care tests (less than 30 minutes), implementing technologies based on omics, big data or massive sequencing or restoring "healthy" microbiomes in critical patients after treatment are the main focuses of research in sepsis. The main benefits of establishing a sepsis code are to decrease the time to achieve diagnosis and treatment, improve organization, unify criteria, promote teamwork to achieve common goals, increase participation, motivation and satisfaction among team members, and reduce costs. ©The Author 2018. Published by Sociedad Española de Quimioterapia. This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)(https://creativecommons.org/licenses/by-nc/4.0/).Entities:
Mesh:
Year: 2018 PMID: 29938972 PMCID: PMC6172679
Source DB: PubMed Journal: Rev Esp Quimioter ISSN: 0214-3429 Impact factor: 1.553
Summary of the main commercially available systems for identification of microbes directly from blood samples
| System | Method | Time to result (hours) | Blood volume (mL) | Microorganism coverage | Resistance and virulence markers | Sensitivity, specificity, and correlation with conventional methods (%) | Comments | Ref |
|---|---|---|---|---|---|---|---|---|
| SepsiTest | Broad-range PCR + sequencing | 6 | 1-10 | >345 bacteria (Gram+, Gram-) and fungi | 0 | 21-87, 85-96, NR | Pros: can be used in other sterile samples. Cons: variable sensitivity and specificity | 35 |
| SeptiFast | Multiple broad-range real-time PCR | 3.5-5 | 1.5 | 6 Gram+ | mecA | 43-95, 60-100, 43-83 | Pros: time to result. Cons: variable sensitivity and specificity, no quantification | 35 |
| Magic Plex | Multiplex PCR + multiplex real-time PCR | 3-5 | 1 | 21 bacteria (Gram+ and Gram-) at species level | mecA, vanA/B | 37-65, 77-92, 73 | Pros: fast. Cons: limited number of studies, succession of reaction and device, no quantification | 35 |
| VYOO | Multiplex PCR + electrophoresis | 8 | 5 | 14 Gram+, 18 Gram-, 7 fungi | 0 | NR,NR, 70 | Pros: highly sensitive. Cons: limited number of studies, several manual steps | 35 |
| PLEX-ID, Abbott | Multiple broad-range PCR/ESI-MS | 6 | 1.25-5 | Up to 800 (Gram+, Gram-, fungi) | mecA, blaKPC, vanA/B | 50-91, 98-99, 79-97 | Pros: universal, detection of mixed bacterial populations, semiquantitative. Cons: no interventional studies | 35 |
| T2 Biosystems | Multiplex PCR + paramagnetic nanoparticles sensors | 3-5 | 2 | 5 | 0 | 91.1, 99.4 | Pros: fast, easy to hand, detect 1 CFU/ml. Cons: limited number of pathogens, limited experience | 42,43 |
Adapted from Opota el al. [35]
Typical pathogens in neonatal and childhood sepsis
| Neonatal sepsis |
| Early Onset (first 72 hours of life) |
| Infants and young children |
| Diarrhoea and pneumonia are the most common infections in poor resource settings |
| Infants and children in hospital |
| Depends on local epidemiology |
| Asplenic or functional asplenia |
| Mosquito-borne disease |
| Malaria ( |
| Others |
| Fungal ( |
Summary of antimicrobial stewardship interventions in sepsis management
| INTERVENTION | RATIONALE |
|---|---|
| At admission specifically review: | Delay in the proper diagnosis and initiation of an adequate treatment has been associated with an increased morbi-mortality |
| During hospital-course assess in a daily basis: | De-escalation allow to achieve optimal clinical outcomes diminishing drug related toxicity, superinfections and costs |
| At discharge ensure: | Antibiotic review and rationalization post sepsis trigger is recommended in sepsis pathways |
| Specific antimicrobial susceptibility maps | Resistance patterns in septic patients may differ from that observed in other populations |
| Educational and audit/feedback programs | Ensure baseline level of awareness among clinical staff regarding antimicrobial stewardship for sepsis |
| Standardized care pathways | Assist providers in optimizing the use of antimicrobials using available best practice, evidence-based guidelines |
| Cultures before antimicrobial therapy | Culture results are a primary tool for antimicrobial stewardship |
| Clinical decision support embedded in an electronic health record | Enhance early detection of sepsis |
| Biomarkers and rapid microbiological techniques | Procalcitonin to guide antimicrobial therapy in respiratory tract infections |
Adapted and modified from Pulia et al. [94].
Road map of recommendations and perspectives for sepsis.
|
The RDT complementing the BC, are very useful tools and efficiency in the diagnosis of sepsis and should be further investigated The combination of RDT and BCs is a strategy that shortens the time to the start of the appropriate antimicrobial therapy. When evaluating RDTs, it is important to focus on the results, including the time for appropriate antimicrobial therapy. Identification of pathogen is important, but knowledge of its susceptibility is the key, so it must have priority. In order to have clinical impact, RDTs must be delivered in real-time decision support, in an automated manner and, ideally, with consultation of specialists in infectious diseases-microbiology and in an antimicrobial administration program. It is important to know the pathophysiological mechanisms that impact on the defence of the host because clinical results depend on them. When looking for new biomarkers for sepsis, it is essential to evaluate their clinical usefulness. They must be easy to obtain, achievable in a limited time and must allow a specific intervention (predictive markers). Molecular signs that allow us to distinguish sterile, non-infectious systemic inflammatory states from systemic infection should be evaluated. Physicians must prescribe antibiotics carefully. Local antimicrobial resistance data should be taken into account as part of good empirical therapy. In patients with septic shock and vasoactive support, it is imperative to start antimicrobials quickly. Delays in treatment should be avoided due to identification or susceptibility of the pathogen. It is essential to educate all health workers for rapid diagnosis, teamwork and personalized management. |
Detection of pathogens is critical during acute phases of sepsis to optimize empirical antimicrobial therapy. This implies the need to develop ultra-fast POC test (less than 30 minutes), to identify microorganisms and detect resistance profiles. The microbial load is an important parameter that will require more attention. The load predicts the result, the risk of death and the failure of antibiotics when the focus is not drained. The load helps distinguish colonization versus infection by using clinical samples taken from mucosal surfaces. (BAS, BAL) The data on the control of hospitalized patients should be integrated into a continuous assessment of vital signs and oxygen saturation for the early detection of sepsis. An electronic alert should be able to detect the deterioration and demand medical attention from the health workers. This Big Data technology already exists in the intensive care units, but it should also be implemented in the hospitalization rooms. NGS technologies can be the next step of precision medicine in sepsis as it happens in cancer care. That NGS test must be performed in a short period of time, directly from clinical samples, and must be optimized to be faster, easier to use and more cost-effective. New strategies are being evaluated to restore “healthy” microbiomes in critically ill patients through certain strains or next-generation probiotics or by expanding indications for fecal transplantation in these patients. The rapid development of omics-based technologies has changed the focus of traditional biomarkers to the expression profiles of blood genes, proteins and metabolites throughout the genome. Big Data analyzes to identify these profiles will increase the need for the experience of computational biologists in the field of sepsis. The identification of drug response phenotypes is a priority. The development of specific endotypes of sepsis will have a major impact on the future design of clinical trials for the treatment of sepsis. Systematic reviews of the impacts of delays on appropriate therapy for patients with sepsis are required. The ultimate goal is to develop evidence to guide physicians in their early decision making and without ecological impact Bioinformatics should collaborate with physicians in the development of modern Big Data analysis in sepsis to identify associations of clinical parameters with pathogen endotypes, predict responses and recommend interventions It is necessary to develop global records and recommendations on the management of sepsis to better understand its causes and mortality |
RDT: rapid diagnosis test, BC: Blood Culture, POC: Point-of-care, BAS: Bronchoaspirate, BAL: Bronchoalveolar lavage, NGS: Next generation sequencing.
Adapted and modified from Rello J et al [96].
Advantages of management by processes
| Disadvantages of organization by groups | Advantages of management by processes | |
|---|---|---|
| Hierarchy | Head of department, head of specialists | Head of the multidisciplinary team |
| Decisions | Decisions by each specialist group | Decisions to achieve the goals |
| Patient management | Each specialist makes decisions without considering the integral solution for the patient | The team provides integral solutions for patient problems |
| Focus | The specialist | The patient |
| Work | Individual work | Teamwork |
| Communication | Vertical, not horizontal | Horizontal and vertical to unify criteria |
| Outcome management | Activities of each group are analyzed separately | Collective outcomes may be controlled |
| Efficiency | Not optimized | Adequate |
Adapted from Govindarajan R [130].