Literature DB >> 29652063

Genetic encoding of 2-aryl-5-carboxytetrazole-based protein photo-cross-linkers.

Yulin Tian1, Qing Lin.   

Abstract

Three γ-heteroatom-substituted N-methylpyrroletetrazole-lysines (mPyTXKs) were synthesized and subsequently incorporated into proteins site-specifically via genetic code expansion. The γ-seleno-substituted derivative, mPyTSeK, showed excellent incorporation efficiency in Escherichia coli and allowed site-selective photo-cross-linking of the GST dimer. Furthermore, the mPyTSeK-cross-linked GST dimer can be cleaved under mild oxidative conditions. The incorporation of mPyTXKs into proteins in mammalian cells was also demonstrated. Lastly, the recombinantly expressed mPyTSeK-encoded Grb2 was shown to covalently capture its interaction partner, EGFR, in mammalian cell lysate, which was subsequently released after treatment with H2O2.

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Year:  2018        PMID: 29652063      PMCID: PMC5921928          DOI: 10.1039/c8cc02431f

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  25 in total

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Authors:  William A Barton; Dorothea Tzvetkova-Robev; Hediye Erdjument-Bromage; Paul Tempst; Dimitar B Nikolov
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2.  A facile system for encoding unnatural amino acids in mammalian cells.

Authors:  Peng R Chen; Dan Groff; Jiantao Guo; Weijia Ou; Susan Cellitti; Bernhard H Geierstanger; Peter G Schultz
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3.  Protein crosslinking reagents containing a selenoethylene linker are cleaved by mild oxidation.

Authors:  O Buchardt; H I Elsner; P E Nielsen; L C Petersen; E Suenson
Journal:  Anal Biochem       Date:  1986-10       Impact factor: 3.365

Review 4.  Photo-induced covalent cross-linking for the analysis of biomolecular interactions.

Authors:  George W Preston; Andrew J Wilson
Journal:  Chem Soc Rev       Date:  2013-02-11       Impact factor: 54.564

Review 5.  Photocrosslinking approaches to interactome mapping.

Authors:  Nam D Pham; Randy B Parker; Jennifer J Kohler
Journal:  Curr Opin Chem Biol       Date:  2012-11-10       Impact factor: 8.822

6.  Protein photo-cross-linking in mammalian cells by site-specific incorporation of a photoreactive amino acid.

Authors:  Nobumasa Hino; Yuko Okazaki; Takatsugu Kobayashi; Akiko Hayashi; Kensaku Sakamoto; Shigeyuki Yokoyama
Journal:  Nat Methods       Date:  2005-02-17       Impact factor: 28.547

7.  A facile method to synthesize histones with posttranslational modification mimics.

Authors:  Zhiyong U Wang; Yane-Shih Wang; Pei-Jing Pai; William K Russell; David H Russell; Wenshe R Liu
Journal:  Biochemistry       Date:  2012-06-19       Impact factor: 3.162

8.  Genetically encoded cleavable protein photo-cross-linker.

Authors:  Shixian Lin; Dan He; Teng Long; Shuai Zhang; Rong Meng; Peng R Chen
Journal:  J Am Chem Soc       Date:  2014-08-13       Impact factor: 15.419

9.  Genetically Encoded 2-Aryl-5-carboxytetrazoles for Site-Selective Protein Photo-Cross-Linking.

Authors:  Yulin Tian; Marco Paolo Jacinto; Yu Zeng; Zhipeng Yu; Jun Qu; Wenshe R Liu; Qing Lin
Journal:  J Am Chem Soc       Date:  2017-04-21       Impact factor: 15.419

10.  Genetically encoded protein photocrosslinker with a transferable mass spectrometry-identifiable label.

Authors:  Yi Yang; Haiping Song; Dan He; Shuai Zhang; Shizhong Dai; Shixian Lin; Rong Meng; Chu Wang; Peng R Chen
Journal:  Nat Commun       Date:  2016-07-27       Impact factor: 14.919

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  3 in total

Review 1.  Photocrosslinking probes for capture of carbohydrate interactions.

Authors:  Han Wu; Jennifer Kohler
Journal:  Curr Opin Chem Biol       Date:  2019-11-06       Impact factor: 8.822

2.  Spontaneous Orthogonal Protein Crosslinking via a Genetically Encoded 2-Carboxy-4-Aryl-1,2,3-Triazole.

Authors:  Yali Xu; Abdur Rahim; Qing Lin
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-30       Impact factor: 16.823

Review 3.  Lights on 2,5-diaryl tetrazoles: applications and limits of a versatile photoclick reaction.

Authors:  Valentina Pirota; Alessandra Benassi; Filippo Doria
Journal:  Photochem Photobiol Sci       Date:  2022-02-21       Impact factor: 4.328

  3 in total

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