Literature DB >> 23396550

Photo-induced covalent cross-linking for the analysis of biomolecular interactions.

George W Preston1, Andrew J Wilson.   

Abstract

Photo-induced cross-linking (PIC) is a powerful strategy for generating information on biomolecular interactions. In PIC, the utility of traditional cross-linking methods is supplemented by the temporal control of photo-activation, enabling the study of non-covalent kinetic intermediates and heterogeneous mixtures. This tutorial review will introduce the photochemistry of activation, reactive intermediates, methods for the functionalisation of biomolecules and the installation of additional functionalities (e.g., affinity tags). In doing so, we shall illustrate the wealth of data that can be obtained using this approach, ranging from the identification of interacting partners and structural data to temporal information. Alongside a discussion of the strengths and weaknesses of the various approaches, their applicability to different types of biological system will be described.

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Year:  2013        PMID: 23396550     DOI: 10.1039/c3cs35459h

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  44 in total

1.  Middle-Down and Chemical Proteomic Approaches to Reveal Histone H4 Modification Dynamics in Cell Cycle: Label-Free Semi-Quantification of Histone Tail Peptide Modifications Including Phosphorylation and Highly Sensitive Capture of Histone PTM Binding Proteins Using Photo-Reactive Crosslinkers.

Authors:  Kazuki Yamamoto; Yoko Chikaoka; Gosuke Hayashi; Ryosuke Sakamoto; Ryuji Yamamoto; Akira Sugiyama; Tatsuhiko Kodama; Akimitsu Okamoto; Takeshi Kawamura
Journal:  Mass Spectrom (Tokyo)       Date:  2015-07-14

2.  Genetic encoding of 2-aryl-5-carboxytetrazole-based protein photo-cross-linkers.

Authors:  Yulin Tian; Qing Lin
Journal:  Chem Commun (Camb)       Date:  2018-04-26       Impact factor: 6.222

Review 3.  Illumination of growth, division and secretion by metabolic labeling of the bacterial cell surface.

Authors:  M Sloan Siegrist; Benjamin M Swarts; Douglas M Fox; Shion An Lim; Carolyn R Bertozzi
Journal:  FEMS Microbiol Rev       Date:  2015-01-23       Impact factor: 16.408

Review 4.  Photocrosslinking probes for capture of carbohydrate interactions.

Authors:  Han Wu; Jennifer Kohler
Journal:  Curr Opin Chem Biol       Date:  2019-11-06       Impact factor: 8.822

5.  Genetically encoded releasable photo-cross-linking strategies for studying protein-protein interactions in living cells.

Authors:  Yi Yang; Haiping Song; Dan He; Shuai Zhang; Shizhong Dai; Xiao Xie; Shixian Lin; Ziyang Hao; Huangtao Zheng; Peng R Chen
Journal:  Nat Protoc       Date:  2017-09-21       Impact factor: 13.491

6.  Photo-Crosslinkable Unnatural Amino Acids Enable Facile Synthesis of Thermoresponsive Nano- to Microgels of Intrinsically Disordered Polypeptides.

Authors:  Simone A Costa; Joseph R Simon; Miriam Amiram; Lei Tang; Stefan Zauscher; Eric M Brustad; Farren J Isaacs; Ashutosh Chilkoti
Journal:  Adv Mater       Date:  2017-12-11       Impact factor: 30.849

7.  Biometals as conformational modulators of α-synuclein photochemical crosslinking.

Authors:  Dinendra L Abeyawardhane; Alyson M Curry; Ashley K Forney; Joel W Roberts; Heather R Lucas
Journal:  J Biol Inorg Chem       Date:  2019-11-14       Impact factor: 3.358

8.  Chemically triggered crosslinking with bioorthogonal cyclopropenones.

Authors:  R David Row; Sean S Nguyen; Andrew J Ferreira; Jennifer A Prescher
Journal:  Chem Commun (Camb)       Date:  2020-09-17       Impact factor: 6.222

9.  Visualizing and trapping transient oligomers in amyloid assembly pathways.

Authors:  Emma E Cawood; Theodoros K Karamanos; Andrew J Wilson; Sheena E Radford
Journal:  Biophys Chem       Date:  2020-11-10       Impact factor: 2.352

Review 10.  Photo-controllable bioorthogonal chemistry for spatiotemporal control of bio-targets in living systems.

Authors:  Jinbo Li; Hao Kong; Chenghong Zhu; Yan Zhang
Journal:  Chem Sci       Date:  2020-03-10       Impact factor: 9.825

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