Literature DB >> 29608310

Copying of Mixed-Sequence RNA Templates inside Model Protocells.

Derek K O'Flaherty1, Neha P Kamat1,2, Fatima N Mirza1, Li Li1, Noam Prywes1, Jack W Szostak1.   

Abstract

The chemical replication of RNA inside fatty acid vesicles is a plausible step in the emergence of cellular life. On the primitive Earth, simple protocells with the ability to import nucleotides and short oligomers from their environment could potentially have replicated and retained larger genomic RNA oligonucleotides within a spatially defined compartment. We have previously shown that short 5'-phosphoroimidazolide-activated "helper" RNA oligomers enable the nonenzymatic copying of mixed-sequence templates in solution, using 5'-phosphoroimidazolide-activated mononucleotides. Here, we report that citrate-chelated Mg2+, a catalyst of nonenzymatic primer extension, enhances fatty acid membrane permeability to such short RNA oligomers up to the size of tetramers, without disrupting vesicle membranes. In addition, selective permeability of short, but not long, oligomers can be further enhanced by elevating the temperature. The ability to increase the permeability of fatty acid membranes to short oligonucleotides allows for the nonenzymatic copying of RNA templates containing all four nucleotides inside vesicles, bringing us one step closer to the goal of building a protocell capable of Darwinian evolution.

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Year:  2018        PMID: 29608310     DOI: 10.1021/jacs.8b00639

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  21 in total

1.  Primitive selection of the fittest emerging through functional synergy in nucleopeptide networks.

Authors:  Anil Kumar Bandela; Nathaniel Wagner; Hava Sadihov; Sara Morales-Reina; Agata Chotera-Ouda; Kingshuk Basu; Rivka Cohen-Luria; Andrés de la Escosura; Gonen Ashkenasy
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-02       Impact factor: 11.205

2.  In vitro gene expression and detergent-free reconstitution of active proteorhodopsin in lipid vesicles.

Authors:  Giorgio Fracasso; Yvonne Körner; David Thomas T Gonzales; T-Y Dora Tang
Journal:  Exp Biol Med (Maywood)       Date:  2019-01-10

Review 3.  Protocells and RNA Self-Replication.

Authors:  Gerald F Joyce; Jack W Szostak
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-09-04       Impact factor: 10.005

4.  Light-powered CO2 fixation in a chloroplast mimic with natural and synthetic parts.

Authors:  Tarryn E Miller; Thomas Beneyton; Thomas Schwander; Christoph Diehl; Mathias Girault; Richard McLean; Tanguy Chotel; Peter Claus; Niña Socorro Cortina; Jean-Christophe Baret; Tobias J Erb
Journal:  Science       Date:  2020-05-08       Impact factor: 47.728

5.  Evolution towards increasing complexity through functional diversification in a protocell model of the RNA world.

Authors:  Suvam Roy; Supratim Sengupta
Journal:  Proc Biol Sci       Date:  2021-11-17       Impact factor: 5.349

6.  Controlling Secretion in Artificial Cells with a Membrane AND Gate.

Authors:  Claire E Hilburger; Miranda L Jacobs; Kamryn R Lewis; Justin A Peruzzi; Neha P Kamat
Journal:  ACS Synth Biol       Date:  2019-05-14       Impact factor: 5.110

7.  Sequence information transfer using covalent template-directed synthesis.

Authors:  Diego Núñez-Villanueva; Maria Ciaccia; Giulia Iadevaia; Elena Sanna; Christopher A Hunter
Journal:  Chem Sci       Date:  2019-04-26       Impact factor: 9.825

Review 8.  Progress in synthesizing protocells.

Authors:  O Duhan Toparlak; Sheref S Mansy
Journal:  Exp Biol Med (Maywood)       Date:  2018-12-03

9.  Enzyme-free ligation of dimers and trimers to RNA primers.

Authors:  Marilyne Sosson; Daniel Pfeffer; Clemens Richert
Journal:  Nucleic Acids Res       Date:  2019-05-07       Impact factor: 16.971

10.  Ribozyme-catalysed RNA synthesis using triplet building blocks.

Authors:  James Attwater; Aditya Raguram; Alexey S Morgunov; Edoardo Gianni; Philipp Holliger
Journal:  Elife       Date:  2018-05-15       Impact factor: 8.140

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