Literature DB >> 34784760

Evolution towards increasing complexity through functional diversification in a protocell model of the RNA world.

Suvam Roy1, Supratim Sengupta1.   

Abstract

The encapsulation of genetic material inside compartments together with the creation and sustenance of functionally diverse internal components are likely to have been key steps in the formation of 'live', replicating protocells in an RNA world. Several experiments have shown that RNA encapsulated inside lipid vesicles can lead to vesicular growth and division through physical processes alone. Replication of RNA inside such vesicles can produce a large number of RNA strands. Yet, the impact of such replication processes on the emergence of the first ribozymes inside such protocells and on the subsequent evolution of the protocell population remains an open question. In this paper, we present a model for the evolution of protocells with functionally diverse ribozymes. Distinct ribozymes can be created with small probabilities during the error-prone RNA replication process via the rolling circle mechanism. We identify the conditions that can synergistically enhance the number of different ribozymes inside a protocell and allow functionally diverse protocells containing multiple ribozymes to dominate the population. Our work demonstrates the existence of an effective pathway towards increasing complexity of protocells that might have eventually led to the origin of life in an RNA world.

Entities:  

Keywords:  RNA world; protocell; ribozyme; template

Mesh:

Substances:

Year:  2021        PMID: 34784760      PMCID: PMC8596018          DOI: 10.1098/rspb.2021.2098

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  49 in total

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Journal:  J Mol Biol       Date:  1964-05       Impact factor: 5.469

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Journal:  Nucleic Acids Res       Date:  2012-02-07       Impact factor: 16.971

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7.  Coupled phases and combinatorial selection in fluctuating hydrothermal pools: a scenario to guide experimental approaches to the origin of cellular life.

Authors:  Bruce Damer; David Deamer
Journal:  Life (Basel)       Date:  2015-03-13

8.  Spontaneous formation and base pairing of plausible prebiotic nucleotides in water.

Authors:  Brian J Cafferty; David M Fialho; Jaheda Khanam; Ramanarayanan Krishnamurthy; Nicholas V Hud
Journal:  Nat Commun       Date:  2016-04-25       Impact factor: 14.919

9.  Random sequences are an abundant source of bioactive RNAs or peptides.

Authors:  Rafik Neme; Cristina Amador; Burcin Yildirim; Ellen McConnell; Diethard Tautz
Journal:  Nat Ecol Evol       Date:  2017-04-24       Impact factor: 15.460

10.  Emergence of ribozyme and tRNA-like structures from mineral-rich muddy pools on prebiotic earth.

Authors:  Suvam Roy; Niraja V Bapat; Julien Derr; Sudha Rajamani; Supratim Sengupta
Journal:  J Theor Biol       Date:  2020-08-13       Impact factor: 2.405

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  1 in total

1.  The Effect of Environment on the Evolution and Proliferation of Protocells of Increasing Complexity.

Authors:  Suvam Roy; Supratim Sengupta
Journal:  Life (Basel)       Date:  2022-08-13
  1 in total

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