Literature DB >> 30181195

Protocells and RNA Self-Replication.

Gerald F Joyce1, Jack W Szostak2.   

Abstract

The general notion of an "RNA world" is that, in the early development of life on the Earth, genetic continuity was assured by the replication of RNA, and RNA molecules were the chief agents of catalytic function. Assuming that all of the components of RNA were available in some prebiotic locale, these components could have assembled into activated nucleotides that condensed to form RNA polymers, setting the stage for the chemical replication of polynucleotides through RNA-templated RNA polymerization. If a sufficient diversity of RNAs could be copied with reasonable rate and fidelity, then Darwinian evolution would begin with RNAs that facilitated their own reproduction enjoying a selective advantage. The concept of a "protocell" refers to a compartment where replication of the primitive genetic material took place and where primitive catalysts gave rise to products that accumulated locally for the benefit of the replicating cellular entity. Replication of both the protocell and its encapsulated genetic material would have enabled natural selection to operate based on the differential fitness of competing cellular entities, ultimately giving rise to modern cellular life.
Copyright © 2018 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2018        PMID: 30181195      PMCID: PMC6120706          DOI: 10.1101/cshperspect.a034801

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  118 in total

1.  A hydrogen-bonding triad stabilizes the chemical transition state of a group I ribozyme.

Authors:  S A Strobel; L Ortoleva-Donnelly
Journal:  Chem Biol       Date:  1999-03

2.  Eutectic phases in ice facilitate nonenzymatic nucleic acid synthesis.

Authors:  A Kanavarioti; P A Monnard; D W Deamer
Journal:  Astrobiology       Date:  2001       Impact factor: 4.335

3.  Selective derivatization and sequestration of ribose from a prebiotic mix.

Authors:  Greg Springsteen; Gerald F Joyce
Journal:  J Am Chem Soc       Date:  2004-08-11       Impact factor: 15.419

4.  De novo synthesis and development of an RNA enzyme.

Authors:  Yoshiya Ikawa; Kentaro Tsuda; Shigeyoshi Matsumura; Tan Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-13       Impact factor: 11.205

5.  Highly efficient self-replicating RNA enzymes.

Authors:  Michael P Robertson; Gerald F Joyce
Journal:  Chem Biol       Date:  2014-01-02

6.  Studies in prebiotic synthesis. VI. Synthesis of purine nucleosides.

Authors:  W D Fuller; R A Sanchez; L E Orgel
Journal:  J Mol Biol       Date:  1972-06-14       Impact factor: 5.469

7.  Self-sustained replication of an RNA enzyme.

Authors:  Tracey A Lincoln; Gerald F Joyce
Journal:  Science       Date:  2009-01-08       Impact factor: 47.728

8.  From prelife to life: how chemical kinetics become evolutionary dynamics.

Authors:  Irene A Chen; Martin A Nowak
Journal:  Acc Chem Res       Date:  2012-02-15       Impact factor: 22.384

9.  The emergence of competition between model protocells.

Authors:  Irene A Chen; Richard W Roberts; Jack W Szostak
Journal:  Science       Date:  2004-09-03       Impact factor: 47.728

10.  RNA phase transitions in repeat expansion disorders.

Authors:  Ankur Jain; Ronald D Vale
Journal:  Nature       Date:  2017-05-31       Impact factor: 49.962

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  53 in total

1.  An RNA polymerase ribozyme that synthesizes its own ancestor.

Authors:  Katrina F Tjhung; Maxim N Shokhirev; David P Horning; Gerald F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-27       Impact factor: 11.205

2.  Kinetic Effects of β,γ-Modified Deoxynucleoside 5'-Triphosphate Analogues on RNA-Catalyzed Polymerization of DNA.

Authors:  Noah A Setterholm; Pouya Haratipour; Boris A Kashemirov; Charles E McKenna; Gerald F Joyce
Journal:  Biochemistry       Date:  2020-12-27       Impact factor: 3.162

Review 3.  The biology, function, and biomedical applications of exosomes.

Authors:  Raghu Kalluri; Valerie S LeBleu
Journal:  Science       Date:  2020-02-07       Impact factor: 47.728

4.  The Origin(s) of Cell(s): Pre-Darwinian Evolution from FUCAs to LUCA : To Carl Woese (1928-2012), for his Conceptual Breakthrough of Cellular Evolution.

Authors:  Shiping Tang
Journal:  J Mol Evol       Date:  2021-06-25       Impact factor: 2.395

5.  Interplay of Guanine Oxidation and G-Quadruplex Folding in Gene Promoters.

Authors:  Aaron M Fleming; Cynthia J Burrows
Journal:  J Am Chem Soc       Date:  2020-01-09       Impact factor: 15.419

6.  On the possible origin of protein homochirality, structure, and biochemical function.

Authors:  Jeffrey Skolnick; Hongyi Zhou; Mu Gao
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-10       Impact factor: 11.205

7.  How DNA and RNA subunits might have formed to make the first genetic alphabet.

Authors:  Kristian Le Vay; Hannes Mutschler
Journal:  Nature       Date:  2020-06       Impact factor: 49.962

8.  Dynamics of the vesicles composed of fatty acids and other amphiphile mixtures: unveiling the role of fatty acids as a model protocell membrane.

Authors:  Niloy Kundu; Dipankar Mondal; Nilmoni Sarkar
Journal:  Biophys Rev       Date:  2020-09-14

9.  The Oligomerization of Glucose Under Plausible Prebiotic Conditions.

Authors:  Zhao Li; Li Li; Kristin R McKenna; Merranda Schmidt; Pamela Pollet; Leslie Gelbaum; Facundo M Fernández; Ramanarayanan Krishnamurthy; Charles L Liotta
Journal:  Orig Life Evol Biosph       Date:  2019-12-02       Impact factor: 1.950

Review 10.  Origin of viruses: primordial replicators recruiting capsids from hosts.

Authors:  Mart Krupovic; Valerian V Dolja; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2019-07       Impact factor: 60.633

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