| Literature DB >> 29251261 |
Camille Ponce1, Flora Kaczorowski1, Thomas Perpoint2, Patrick Miailhes2, Alain Sigal3, Etienne Javouhey4, Yves Gillet4, Laurent Jacquin5, Marion Douplat6, Karim Tazarourte7, Véronique Potinet6, Bruno Simon1, Adeline Lavoignat8, Guillaume Bonnot8, Fatimata Sow8, Anne-Lise Bienvenu9, Stéphane Picot10.
Abstract
BACKGROUND: Sensitive and easy-to-perform methods for the diagnosis of malaria are not yet available. Improving the limit of detection and following the requirements for certification are issues to be addressed in both endemic and non-endemic settings. The aim of this study was to test whether loop-mediated isothermal amplification of DNA (LAMP) may be an alternative to microscopy or real-time PCR for the screening of imported malaria cases in non-endemic area.Entities:
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Year: 2017 PMID: 29251261 PMCID: PMC5734902 DOI: 10.1051/parasite/2017054
Source DB: PubMed Journal: Parasite ISSN: 1252-607X Impact factor: 3.000
Figure 1Study flow chart.
Performance comparison between LAMP and microscopy or real-time PCR. Sensitivity, specificity, positive predictive value and negative predictive value were calculated based on 299 samples, excluding the 11 invalid results from LAMP. The number of samples used for microscopy are 79 positive (83–4 invalid excluded) and 220 negative (227–7 invalid excluded). The number of samples used for PCR are 85 positive (89–4 invalid excluded) and 214 negative (221–7 invalid excluded).
| Microscopy | Real-time PCR | ||||||
|---|---|---|---|---|---|---|---|
| + | − | total | + | − | total | ||
| LAMP | + | 79 | 14 | 93 | 85 | 4 | 89 |
| − | 0 | 206 | 206 | 0 | 210 | 210 | |
| 79 | 220 | 299 | 85 | 214 | 299 | ||
Limit of detection of the Illumigen Malaria plus LAMP method. Serial dilutions of Plasmodium falciparum in vitro cultivated clones 3D7 and W2 were tested using light microscopy (Giemsa stained thin blood smears), real-time PCR and LAMP Illumigen malaria. (inv. = invalid)
| Plasmodium falciparum clones | Parasitemia (dilutions from thin blood smears) | Real-time PCR | LAMP | ||||
|---|---|---|---|---|---|---|---|
| Repeated measures | LAMP interpretation | ||||||
| 3D7 | 0.002 | 100 | Positive | inv. | + | + | Positive |
| – | 0.0002 | 10 | Positive | + | + | + | Positive |
| – | 0.00002 | 1 | Positive | + | inv. | + | Positive |
| – | 0.000002 | 0.1 | Positive | + | − | + | Positive |
| – | 0.0000002 | 0.01 | Positive | − | − | − | Negative |
| – | 0.00000002 | 0.001 | Negative | − | − | − | Negative |
| – | 0.00000002 | 0.0001 | Negative | − | − | − | Negative |
| W2 | 0.002 | 100 | Positive | + | + | inv. | Positive |
| – | 0.0002 | 10 | Positive | + | + | inv. | Positive |
| – | 0.00002 | 1 | Positive | + | + | + | Positive |
| – | 0.000002 | 0.1 | Positive | + | + | + | Positive |
| – | 0.000002 | 0.01 | Positive | − | − | − | Negative |
| – | 0.0000002 | 0.001 | Negative | − | − | − | Negative |
| – | 0.00000002 | 0.0001 | Negative | − | − | − | Negative |