Literature DB >> 29229886

Criticality in cell differentiation.

Indrani Bose1, Mainak Pal.   

Abstract

Cell differentiation is an important process in living organisms. Differentiation is mostly based on binary decisions with the progenitor cells choosing between two specific lineages. The differentiation dynamics have both deterministic and stochastic components. Several theoretical studies suggest that cell differentiation is a bifurcation phenomenon, well-known in dynamical systems theory. The bifurcation point has the character of a critical point with the system dynamics exhibiting specific features in its vicinity. These include the critical slowing down, rising variance and lag-1 autocorrelation function, strong correlations between the fluctuations of key variables and non-Gaussianity in the distribution of fluctuations. Recent experimental studies provide considerable support to the idea of criticality in cell differentiation and in other biological processes like the development of the fruit fly embryo. In this review, an elementary introduction is given to the concept of criticality in cell differentiation. The correspondence between the signatures of criticality and experimental observations on blood cell differentiation in mice is further highlighted.

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Year:  2017        PMID: 29229886     DOI: 10.1007/s12038-017-9721-6

Source DB:  PubMed          Journal:  J Biosci        ISSN: 0250-5991            Impact factor:   1.826


  45 in total

1.  Different cell fates from cell-cell interactions: core architectures of two-cell bistable networks.

Authors:  Hervé Rouault; Vincent Hakim
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

2.  The potential landscape of genetic circuits imposes the arrow of time in stem cell differentiation.

Authors:  Jin Wang; Li Xu; Erkang Wang; Sui Huang
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

Review 3.  Stem cell states, fates, and the rules of attraction.

Authors:  Tariq Enver; Martin Pera; Carsten Peterson; Peter W Andrews
Journal:  Cell Stem Cell       Date:  2009-05-08       Impact factor: 24.633

Review 4.  Early-warning signals for critical transitions.

Authors:  Marten Scheffer; Jordi Bascompte; William A Brock; Victor Brovkin; Stephen R Carpenter; Vasilis Dakos; Hermann Held; Egbert H van Nes; Max Rietkerk; George Sugihara
Journal:  Nature       Date:  2009-09-03       Impact factor: 49.962

5.  Quasi-potential landscape in complex multi-stable systems.

Authors:  Joseph Xu Zhou; M D S Aliyu; Erik Aurell; Sui Huang
Journal:  J R Soc Interface       Date:  2012-08-29       Impact factor: 4.118

Review 6.  Bistability, bifurcations, and Waddington's epigenetic landscape.

Authors:  James E Ferrell
Journal:  Curr Biol       Date:  2012-06-05       Impact factor: 10.834

Review 7.  Nature, nurture, or chance: stochastic gene expression and its consequences.

Authors:  Arjun Raj; Alexander van Oudenaarden
Journal:  Cell       Date:  2008-10-17       Impact factor: 41.582

Review 8.  Systems biology of stem cell fate and cellular reprogramming.

Authors:  Ben D Macarthur; Avi Ma'ayan; Ihor R Lemischka
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-09       Impact factor: 94.444

Review 9.  Single-molecule approaches to stochastic gene expression.

Authors:  Arjun Raj; Alexander van Oudenaarden
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

10.  Gene-pair expression signatures reveal lineage control.

Authors:  Merja Heinäniemi; Matti Nykter; Roger Kramer; Anke Wienecke-Baldacchino; Lasse Sinkkonen; Joseph Xu Zhou; Richard Kreisberg; Stuart A Kauffman; Sui Huang; Ilya Shmulevich
Journal:  Nat Methods       Date:  2013-04-21       Impact factor: 28.547

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  1 in total

Review 1.  Statistical mechanics meets single-cell biology.

Authors:  Andrew E Teschendorff; Andrew P Feinberg
Journal:  Nat Rev Genet       Date:  2021-04-19       Impact factor: 53.242

  1 in total

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