Literature DB >> 29190082

Pourbaix Diagram, Proton-Coupled Electron Transfer, and Decay Kinetics of a Protein Tryptophan Radical: Comparing the Redox Properties of W32 and Y32 Generated Inside the Structurally Characterized α3W and α3Y Proteins.

Starla D Glover1,2, Robin Tyburski2, Li Liang1, Cecilia Tommos1, Leif Hammarström2.   

Abstract

Protein-based "hole" hopping typically involves spatially arranged redox-active tryptophan or tyrosine residues. Thermodynamic information is scarce for this type of process. The well-structured α3W model protein was studied by protein film square wave voltammetry and transient absorption spectroscopy to obtain a comprehensive thermodynamic and kinetic description of a buried tryptophan residue. A Pourbaix diagram, correlating thermodynamic potentials (E°') with pH, is reported for W32 in α3W and compared to equivalent data recently presented for Y32 in α3Y ( Ravichandran , K. R. ; Zong , A. B. ; Taguchi , A. T. ; Nocera , D. G. ; Stubbe , J. ; Tommos , C. J. Am. Chem. Soc. 2017 , 139 , 2994 - 3004 ). The α3W Pourbaix diagram displays a pKOX of 3.4, a E°'(W32(N•+/NH)) of 1293 mV, and a E°'(W32(N•/NH); pH 7.0) of 1095 ± 4 mV versus the normal hydrogen electrode. W32(N•/NH) is 109 ± 4 mV more oxidizing than Y32(O•/OH) at pH 5.4-10. In the voltammetry measurements, W32 oxidation-reduction occurs on a time scale of about 4 ms and is coupled to the release and subsequent uptake of one full proton to and from bulk. Kinetic analysis further shows that W32 oxidation likely involves pre-equilibrium electron transfer followed by proton transfer to a water or small water cluster as the primary acceptor. A well-resolved absorption spectrum of W32• is presented, and analysis of decay kinetics show that W32• persists ∼104 times longer than aqueous W• due to significant stabilization by the protein. The redox characteristics of W32 and Y32 are discussed relative to global and local protein properties.

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Year:  2017        PMID: 29190082      PMCID: PMC5762255          DOI: 10.1021/jacs.7b08032

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  31 in total

1.  pH-dependent redox potential: how to use it correctly in the activation energy analysis.

Authors:  Lev I Krishtalik
Journal:  Biochim Biophys Acta       Date:  2003-04-18

2.  Direct Evidence of a Tryptophan Analogue Radical Formed in a Concerted Electron-Proton Transfer Reaction in Water.

Authors:  Prateek Dongare; Somnath Maji; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2016-02-12       Impact factor: 15.419

3.  Hydrogen bonding of tryptophan radicals revealed by EPR at 700 GHz.

Authors:  Stefan Stoll; Hannah S Shafaat; J Krzystek; Andrew Ozarowski; Michael J Tauber; Judy E Kim; R David Britt
Journal:  J Am Chem Soc       Date:  2011-10-25       Impact factor: 15.419

4.  Moving a phenol hydroxyl group from the surface to the interior of a protein: effects on the phenol potential and pK(A).

Authors:  Sam Hay; Kristina Westerlund; Cecilia Tommos
Journal:  Biochemistry       Date:  2005-09-06       Impact factor: 3.162

5.  Redox-switchable direction of photoinduced electron transfer in an Ru(bpy)3(2+)-viologen dyad.

Authors:  Reiner Lomoth; Tilmann Häupl; Olof Johansson; Leif Hammarström
Journal:  Chemistry       Date:  2002-01-04       Impact factor: 5.236

6.  Hole hopping through tyrosine/tryptophan chains protects proteins from oxidative damage.

Authors:  Harry B Gray; Jay R Winkler
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

7.  Reversible phenol oxidation and reduction in the structurally well-defined 2-Mercaptophenol-α₃C protein.

Authors:  Cecilia Tommos; Kathleen G Valentine; Melissa C Martínez-Rivera; Li Liang; Veronica R Moorman
Journal:  Biochemistry       Date:  2013-02-14       Impact factor: 3.162

8.  Formal reduction potential of 3,5-difluorotyrosine in a structured protein: insight into multistep radical transfer.

Authors:  Kanchana R Ravichandran; Li Liang; JoAnne Stubbe; Cecilia Tommos
Journal:  Biochemistry       Date:  2013-11-22       Impact factor: 3.162

9.  Electrochemical and structural properties of a protein system designed to generate tyrosine Pourbaix diagrams.

Authors:  Melissa C Martínez-Rivera; Bruce W Berry; Kathleen G Valentine; Kristina Westerlund; Sam Hay; Cecilia Tommos
Journal:  J Am Chem Soc       Date:  2011-10-19       Impact factor: 15.419

10.  Engineering an Artificial Flavoprotein Magnetosensor.

Authors:  Chris Bialas; Lauren E Jarocha; Kevin B Henbest; Tilo M Zollitsch; Goutham Kodali; Christiane R Timmel; Stuart R Mackenzie; P Leslie Dutton; Christopher C Moser; P J Hore
Journal:  J Am Chem Soc       Date:  2016-12-16       Impact factor: 15.419

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  7 in total

1.  Properties of Site-Specifically Incorporated 3-Aminotyrosine in Proteins To Study Redox-Active Tyrosines: Escherichia coli Ribonucleotide Reductase as a Paradigm.

Authors:  Wankyu Lee; Müge Kasanmascheff; Michael Huynh; Anthony Quartararo; Cyrille Costentin; Isabel Bejenke; Daniel G Nocera; Marina Bennati; Cecilia Tommos; JoAnne Stubbe
Journal:  Biochemistry       Date:  2018-04-17       Impact factor: 3.162

2.  Computing Proton-Coupled Redox Potentials of Fluorotyrosines in a Protein Environment.

Authors:  Clorice R Reinhardt; Raquel Sequeira; Cecilia Tommos; Sharon Hammes-Schiffer
Journal:  J Phys Chem B       Date:  2020-12-30       Impact factor: 2.991

3.  Proton-Coupled Electron Transfer from Tyrosine in the Interior of a de novo Protein: Mechanisms and Primary Proton Acceptor.

Authors:  Astrid Nilsen-Moe; Clorice R Reinhardt; Starla D Glover; Li Liang; Sharon Hammes-Schiffer; Leif Hammarström; Cecilia Tommos
Journal:  J Am Chem Soc       Date:  2020-06-17       Impact factor: 15.419

Review 4.  Functional and protective hole hopping in metalloenzymes.

Authors:  Harry B Gray; Jay R Winkler
Journal:  Chem Sci       Date:  2021-09-27       Impact factor: 9.825

5.  Electrochemical proton-coupled electron transfer of an anthracene-based azo dye.

Authors:  Amanda N Oldacre; Elizabeth R Young
Journal:  RSC Adv       Date:  2020-04-14       Impact factor: 4.036

6.  Concerted and Stepwise Proton-Coupled Electron Transfer for Tryptophan-Derivative Oxidation with Water as the Primary Proton Acceptor: Clarifying a Controversy.

Authors:  Astrid Nilsen-Moe; Andrea Rosichini; Starla D Glover; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2022-04-13       Impact factor: 16.383

7.  Direct Measurement of Charge Regulation in Metalloprotein Electron Transfer.

Authors:  Collin T Zahler; Hongyu Zhou; Alireza Abdolvahabi; Rebecca L Holden; Sanaz Rasouli; Peng Tao; Bryan F Shaw
Journal:  Angew Chem Int Ed Engl       Date:  2018-03-25       Impact factor: 15.336

  7 in total

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