Literature DB >> 29630358

Properties of Site-Specifically Incorporated 3-Aminotyrosine in Proteins To Study Redox-Active Tyrosines: Escherichia coli Ribonucleotide Reductase as a Paradigm.

Wankyu Lee, Müge Kasanmascheff1, Michael Huynh2, Anthony Quartararo, Cyrille Costentin2,3, Isabel Bejenke1, Daniel G Nocera2, Marina Bennati1, Cecilia Tommos4, JoAnne Stubbe.   

Abstract

3-Aminotyrosine (NH2Y) has been a useful probe to study the role of redox active tyrosines in enzymes. This report describes properties of NH2Y of key importance for its application in mechanistic studies. By combining the tRNA/NH2Y-RS suppression technology with a model protein tailored for amino acid redox studies (α3X, X = NH2Y), the formal reduction potential of NH2Y32(O•/OH) ( E°' = 395 ± 7 mV at pH 7.08 ± 0.05) could be determined using protein film voltammetry. We find that the Δ E°' between NH2Y32(O•/OH) and Y32(O•/OH) when measured under reversible conditions is ∼300-400 mV larger than earlier estimates based on irreversible voltammograms obtained on aqueous NH2Y and Y. We have also generated D6-NH2Y731-α2 of ribonucleotide reductase (RNR), which when incubated with β2/CDP/ATP generates the D6-NH2Y731•-α2/β2 complex. By multifrequency electron paramagnetic resonance (35, 94, and 263 GHz) and 34 GHz 1H ENDOR spectroscopies, we determined the hyperfine coupling (hfc) constants of the amino protons that establish RNH2• planarity and thus minimal perturbation of the reduction potential by the protein environment. The amount of Y in the isolated NH2Y-RNR incorporated by infidelity of the tRNA/NH2Y-RS pair was determined by a generally useful LC-MS method. This information is essential to the utility of this NH2Y probe to study any protein of interest and is employed to address our previously reported activity associated with NH2Y-substituted RNRs.

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Year:  2018        PMID: 29630358      PMCID: PMC6110390          DOI: 10.1021/acs.biochem.8b00160

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  68 in total

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Journal:  Biochemistry       Date:  2017-02-02       Impact factor: 3.162

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Authors:  Alexander J Mijalis; Dale A Thomas; Mark D Simon; Andrea Adamo; Ryan Beaumont; Klavs F Jensen; Bradley L Pentelute
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5.  Tyrosine radicals in photosystem II and related model compounds. Characterization by isotopic labeling and EPR spectroscopy.

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Authors:  Qinghui Lin; Mackenzie J Parker; Alexander T Taguchi; Kanchana Ravichandran; Albert Kim; Gyunghoon Kang; Jimin Shao; Catherine L Drennan; JoAnne Stubbe
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Authors:  Cecilia Tommos; Kathleen G Valentine; Melissa C Martínez-Rivera; Li Liang; Veronica R Moorman
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9.  An oxyferrous heme/protein-based radical intermediate is catalytically competent in the catalase reaction of Mycobacterium tuberculosis catalase-peroxidase (KatG).

Authors:  Javier Suarez; Kalina Ranguelova; Andrzej A Jarzecki; Julia Manzerova; Vladimir Krymov; Xiangbo Zhao; Shengwei Yu; Leonid Metlitsky; Gary J Gerfen; Richard S Magliozzo
Journal:  J Biol Chem       Date:  2009-01-12       Impact factor: 5.157

10.  Hydrogen bond network between amino acid radical intermediates on the proton-coupled electron transfer pathway of E. coli α2 ribonucleotide reductase.

Authors:  Thomas U Nick; Wankyu Lee; Simone Kossmann; Frank Neese; JoAnne Stubbe; Marina Bennati
Journal:  J Am Chem Soc       Date:  2014-12-29       Impact factor: 15.419

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  5 in total

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Authors:  Elnaz Zeynaloo; Elsayed M Zahran; Yu-Ping Yang; Emre Dikici; Trajen Head; Leonidas G Bachas; Sylvia Daunert
Journal:  Biosens Bioelectron       Date:  2021-12-07       Impact factor: 12.545

2.  Detection of Water Molecules on the Radical Transfer Pathway of Ribonucleotide Reductase by 17O Electron-Nuclear Double Resonance Spectroscopy.

Authors:  Fabian Hecker; JoAnne Stubbe; Marina Bennati
Journal:  J Am Chem Soc       Date:  2021-05-06       Impact factor: 15.419

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4.  Proton-Coupled Electron Transfer from Tyrosine in the Interior of a de novo Protein: Mechanisms and Primary Proton Acceptor.

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Journal:  J Am Chem Soc       Date:  2020-06-17       Impact factor: 15.419

5.  Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.

Authors:  Elizabeth J Blaesi; Gavin M Palowitch; Kai Hu; Amelia J Kim; Hannah R Rose; Rahul Alapati; Marshall G Lougee; Hee Jong Kim; Alexander T Taguchi; Kong Ooi Tan; Tatiana N Laremore; Robert G Griffin; Carsten Krebs; Megan L Matthews; Alexey Silakov; J Martin Bollinger; Benjamin D Allen; Amie K Boal
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

  5 in total

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