Literature DB >> 22007694

Hydrogen bonding of tryptophan radicals revealed by EPR at 700 GHz.

Stefan Stoll1, Hannah S Shafaat, J Krzystek, Andrew Ozarowski, Michael J Tauber, Judy E Kim, R David Britt.   

Abstract

Redox-active tryptophans are important in biological electron transfer and redox biochemistry. Proteins can tune the electron transfer kinetics and redox potentials of tryptophan via control of the protonation state and the hydrogen-bond strength. We examine the local environment of two neutral tryptophan radicals (Trp108 on the solvent-exposed surface and Trp48 buried in the hydrophobic core) in two azurin variants. Ultrahigh-field EPR spectroscopy at 700 GHz and 25 T allowed complete resolution of all of the principal components of the g tensors of the two radicals and revealed significant differences in the g tensor anisotropies. The spectra together with (2)H ENDOR spectra and supporting DFT calculations show that the g tensor anisotropy is directly diagnostic of the presence or absence as well as the strength of a hydrogen bond to the indole nitrogen. The approach is a powerful one for identifying and characterizing hydrogen bonds that are critical in the regulation of tryptophan-assisted electron transfer and tryptophan-mediated redox chemistry in proteins.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 22007694      PMCID: PMC3251908          DOI: 10.1021/ja208462t

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  27 in total

1.  Resolving intermediates in biological proton-coupled electron transfer: a tyrosyl radical prior to proton movement.

Authors:  Peter Faller; Charilaos Goussias; A William Rutherford; Sun Un
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-10       Impact factor: 11.205

2.  Crystal structure of Leishmania major peroxidase and characterization of the compound i tryptophan radical.

Authors:  Victoria S Jasion; Julio A Polanco; Yergalem T Meharenna; Huiying Li; Thomas L Poulos
Journal:  J Biol Chem       Date:  2011-05-12       Impact factor: 5.157

3.  High-frequency (140-GHz) time domain EPR and ENDOR spectroscopy: the tyrosyl radical-diiron cofactor in ribonucleotide reductase from yeast.

Authors:  G Bar; M Bennati; H H Nguyen; J Ge; J A Stubbe; R G Griffin
Journal:  J Am Chem Soc       Date:  2001-04-18       Impact factor: 15.419

4.  Tryptophan-based radical in the catalytic mechanism of versatile peroxidase from Bjerkandera adusta.

Authors:  Rebecca Pogni; M Camilla Baratto; Stefania Giansanti; Christian Teutloff; Jorge Verdin; Brenda Valderrama; Friedhelm Lendzian; Wolfgang Lubitz; Rafael Vazquez-Duhalt; Riccardo Basosi
Journal:  Biochemistry       Date:  2005-03-22       Impact factor: 3.162

5.  The iron-oxygen reconstitution reaction in protein R2-Tyr-177 mutants of mouse ribonucleotide reductase. Epr and electron nuclear double resonance studies on a new transient tryptophan radical.

Authors:  S Pötsch; F Lendzian; R Ingemarson; A Hörnberg; L Thelander; W Lubitz; G Lassmann; A Gräslund
Journal:  J Biol Chem       Date:  1999-06-18       Impact factor: 5.157

6.  A tryptophan neutral radical in the oxidized state of versatile peroxidase from Pleurotus eryngii: a combined multifrequency EPR and density functional theory study.

Authors:  Rebecca Pogni; M Camilla Baratto; Christian Teutloff; Stefania Giansanti; Francisco J Ruiz-Dueñas; Thomas Choinowski; Klaus Piontek; Angel T Martínez; Friedhelm Lendzian; Riccardo Basosi
Journal:  J Biol Chem       Date:  2006-01-27       Impact factor: 5.157

7.  The g-values and hyperfine coupling of amino acid radicals in proteins: comparison of experimental measurements with ab initio calculations.

Authors:  Sun Un
Journal:  Magn Reson Chem       Date:  2005-11       Impact factor: 2.447

8.  Protein-cofactor interactions in bacterial reaction centers from Rhodobacter sphaeroides R-26: II. Geometry of the hydrogen bonds to the primary quinone formula by 1H and 2H ENDOR spectroscopy.

Authors:  M Flores; R Isaacson; E Abresch; R Calvo; W Lubitz; G Feher
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

9.  A new method of identifying the site of tyrosyl radicals in proteins.

Authors:  Dimitri A Svistunenko; Chris E Cooper
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

10.  Spectroscopy and reactivity of a photogenerated tryptophan radical in a structurally defined protein environment.

Authors:  Jeremiah E Miller; Cristian Grădinaru; Brian R Crane; Angel J Di Bilio; William A Wehbi; Sun Un; Jay R Winkler; Harry B Gray
Journal:  J Am Chem Soc       Date:  2003-11-26       Impact factor: 15.419

View more
  15 in total

Review 1.  High-frequency and high-field electron paramagnetic resonance (HFEPR): a new spectroscopic tool for bioinorganic chemistry.

Authors:  Joshua Telser; J Krzystek; Andrew Ozarowski
Journal:  J Biol Inorg Chem       Date:  2014-01-30       Impact factor: 3.358

2.  Photonic band-gap resonators for high-field/high-frequency EPR of microliter-volume liquid aqueous samples.

Authors:  Sergey Milikisiyants; Alexander A Nevzorov; Alex I Smirnov
Journal:  J Magn Reson       Date:  2018-09-20       Impact factor: 2.229

3.  Photogeneration and Quenching of Tryptophan Radical in Azurin.

Authors:  Bethany C Larson; Jennifer R Pomponio; Hannah S Shafaat; Rachel H Kim; Brian S Leigh; Michael J Tauber; Judy E Kim
Journal:  J Phys Chem B       Date:  2015-02-17       Impact factor: 2.991

4.  The Color of Cation-π Interactions: Subtleties of Amine-Tryptophan Interaction Energetics Allow for Radical-like Visible Absorbance and Fluorescence.

Authors:  Laura J Juszczak; Azaria S Eisenberg
Journal:  J Am Chem Soc       Date:  2017-06-07       Impact factor: 15.419

5.  Efficient methylation of C2 in l-tryptophan by the cobalamin-dependent radical S-adenosylmethionine methylase TsrM requires an unmodified N1 amine.

Authors:  Anthony J Blaszczyk; Bo Wang; Alexey Silakov; Jackson V Ho; Squire J Booker
Journal:  J Biol Chem       Date:  2017-07-26       Impact factor: 5.157

Review 6.  Proton-Coupled Electron Transfer in Organic Synthesis: Fundamentals, Applications, and Opportunities.

Authors:  David C Miller; Kyle T Tarantino; Robert R Knowles
Journal:  Top Curr Chem (Cham)       Date:  2016-05-09

7.  Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.

Authors:  Erik T Yukl; Fange Liu; J Krzystek; Sooim Shin; Lyndal M R Jensen; Victor L Davidson; Carrie M Wilmot; Aimin Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

8.  High-Frequency/High-Field Electron Paramagnetic Resonance and Theoretical Studies of Tryptophan-Based Radicals.

Authors:  Ian Davis; Teruaki Koto; James R Terrell; Alexander Kozhanov; J Krzystek; Aimin Liu
Journal:  J Phys Chem A       Date:  2018-03-15       Impact factor: 2.781

9.  Pourbaix Diagram, Proton-Coupled Electron Transfer, and Decay Kinetics of a Protein Tryptophan Radical: Comparing the Redox Properties of W32 and Y32 Generated Inside the Structurally Characterized α3W and α3Y Proteins.

Authors:  Starla D Glover; Robin Tyburski; Li Liang; Cecilia Tommos; Leif Hammarström
Journal:  J Am Chem Soc       Date:  2017-12-19       Impact factor: 15.419

10.  Trapping a cross-linked lysine-tryptophan radical in the catalytic cycle of the radical SAM enzyme SuiB.

Authors:  Aidin R Balo; Alessio Caruso; Lizhi Tao; Dean J Tantillo; Mohammad R Seyedsayamdost; R David Britt
Journal:  Proc Natl Acad Sci U S A       Date:  2021-05-25       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.